Cow genome map
| Conread name: | Fet1-UMC-pd20fet-008-d08 |
| Conread position: | 163-401 |
| Cow position: | chr21:30145611-30145367 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 162, 32 |
| Conread position: | 179-404 |
| Cow position: | chr21:11182585-11182818 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 189-394 |
| Cow position: | chr21:30592262-30592055 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 189-402 |
| Cow position: | chr21:34654116-34654337 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 190-315 |
| Cow position: | chr21:23460180-23460301 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 190-383 |
| Cow position: | chr21:28810219-28810027 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 190-384 |
| Cow position: | chr21:3360970-3360767 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 190-387 |
| Cow position: | chr21:18355263-18355452 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 190-394 |
| Cow position: | chr21:29014867-29014658 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 190-394 |
| Cow position: | chr21:36910780-36910996 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 190-395 |
| Cow position: | chr21:22210203-22209983 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 190-395 |
| Cow position: | chr21:30231651-30231436 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 190-395 |
| Cow position: | chr21:47764074-47763866 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-398 |
| Cow position: | chr21:1511336-1511549 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-398 |
| Cow position: | chr21:37838023-37837814 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 190-399 |
| Cow position: | chr21:957716-957933 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 190-399 |
| Cow position: | chr21:18064870-18064662 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 190-400 |
| Cow position: | chr21:44724325-44724111 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 190-401 |
| Cow position: | chr21:71630-71852 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 190-402 |
| Cow position: | chr21:12154174-12154392 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 190-402 |
| Cow position: | chr21:12461924-12461702 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 190-402 |
| Cow position: | chr21:17183965-17184185 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 190-402 |
| Cow position: | chr21:20418639-20418439 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 190-402 |
| Cow position: | chr21:23586925-23587139 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 190-402 |
| Cow position: | chr21:25764679-25764883 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-402 |
| Cow position: | chr21:38900817-38901030 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-402 |
| Cow position: | chr21:41918199-41917972 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 190-403 |
| Cow position: | chr21:5426983-5427195 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 125, 20 |
| Conread position: | 190-403 |
| Cow position: | chr21:8206815-8207025 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-403 |
| Cow position: | chr21:13395634-13395849 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 190-403 |
| Cow position: | chr21:31253580-31253797 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-403 |
| Cow position: | chr21:31279299-31279521 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 190-403 |
| Cow position: | chr21:37014363-37014157 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 190-403 |
| Cow position: | chr21:46849084-46848865 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:3763699-3763482 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:5898358-5898140 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 190-404 |
| Cow position: | chr21:6997983-6998210 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 190-404 |
| Cow position: | chr21:7823404-7823604 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 190-404 |
| Cow position: | chr21:10004842-10004614 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:10673164-10673379 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:15544177-15543970 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:16152483-16152709 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:33982764-33982545 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:33997184-33996981 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 190-404 |
| Cow position: | chr21:36508281-36508499 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:42144869-42145088 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-404 |
| Cow position: | chr21:47465075-47464850 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 190-405 |
| Cow position: | chr21:27863470-27863248 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 190-406 |
| Cow position: | chr21:28919480-28919258 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 190-408 |
| Cow position: | chr21:5464793-5465019 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 191-325 |
| Cow position: | chr21:3818253-3818389 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 17 |
| Conread position: | 191-398 |
| Cow position: | chr21:18568595-18568374 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 19 |
| Conread position: | 191-400 |
| Cow position: | chr21:42209585-42209380 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 191-401 |
| Cow position: | chr21:32393013-32392797 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 191-404 |
| Cow position: | chr21:6051547-6051774 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 191-404 |
| Cow position: | chr21:29978716-29978496 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 191-406 |
| Cow position: | chr21:25014982-25014769 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 125, 19 |
| Conread position: | 191-406 |
| Cow position: | chr21:40134201-40134416 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 192-398 |
| Cow position: | chr21:28244516-28244731 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 192-399 |
| Cow position: | chr21:29658321-29658538 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 192-399 |
| Cow position: | chr21:45971127-45970915 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 192-402 |
| Cow position: | chr21:12301466-12301263 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 192-404 |
| Cow position: | chr21:34739889-34740095 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 192-406 |
| Cow position: | chr21:4281830-4281612 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 192-406 |
| Cow position: | chr21:6834094-6834320 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 192-406 |
| Cow position: | chr21:6909837-6909619 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 192-406 |
| Cow position: | chr21:40291701-40291482 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 193-332 |
| Cow position: | chr21:15976679-15976820 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 193-405 |
| Cow position: | chr21:6713479-6713254 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 193-406 |
| Cow position: | chr21:17511822-17512044 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 194-339 |
| Cow position: | chr21:43259266-43259414 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 194-385 |
| Cow position: | chr21:7066334-7066135 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 194-397 |
| Cow position: | chr21:28030336-28030541 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 194-398 |
| Cow position: | chr21:8426493-8426706 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 194-402 |
| Cow position: | chr21:12104412-12104620 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 194-402 |
| Cow position: | chr21:36682372-36682593 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 194-404 |
| Cow position: | chr21:32339693-32339476 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 8 |
| Conread position: | 194-406 |
| Cow position: | chr21:38449398-38449181 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 194-409 |
| Cow position: | chr21:7673170-7673387 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 195-394 |
| Cow position: | chr21:28907496-28907290 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 195-398 |
| Cow position: | chr21:674733-674931 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-404 |
| Cow position: | chr21:9905801-9905593 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 197-398 |
| Cow position: | chr21:82117-82322 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 198-394 |
| Cow position: | chr21:19868904-19868703 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 198-398 |
| Cow position: | chr21:27229740-27229540 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 198-399 |
| Cow position: | chr21:30222396-30222606 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 198-402 |
| Cow position: | chr21:41590514-41590299 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 198-404 |
| Cow position: | chr21:641638-641853 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 198-404 |
| Cow position: | chr21:44214176-44214380 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 199-394 |
| Cow position: | chr21:24875404-24875611 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 200-404 |
| Cow position: | chr21:25012135-25012347 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 206-406 |
| Cow position: | chr21:21940349-21940139 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 207-402 |
| Cow position: | chr21:12298655-12298854 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 208-394 |
| Cow position: | chr21:23672809-23673004 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 208-394 |
| Cow position: | chr21:42135556-42135360 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 209-388 |
| Cow position: | chr21:17193690-17193495 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 209-395 |
| Cow position: | chr21:49353698-49353884 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 85, 6 |
| Conread position: | 209-397 |
| Cow position: | chr21:48482467-48482268 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 209-398 |
| Cow position: | chr21:4276541-4276359 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 209-400 |
| Cow position: | chr21:26735470-26735662 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 209-401 |
| Cow position: | chr21:20174379-20174578 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 209-402 |
| Cow position: | chr21:15012500-15012698 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 166 |
| Conread position: | 209-403 |
| Cow position: | chr21:33791316-33791129 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 209-404 |
| Cow position: | chr21:45355894-45356084 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 86, 106 |
| Conread position: | 209-406 |
| Cow position: | chr21:16498580-16498785 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 210-386 |
| Cow position: | chr21:41287731-41287545 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 210-391 |
| Cow position: | chr21:11644904-11644710 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 210-395 |
| Cow position: | chr21:30848879-30848688 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 210-398 |
| Cow position: | chr21:30657932-30658124 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 210-399 |
| Cow position: | chr21:745238-745434 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 106, 9 |
| Conread position: | 210-400 |
| Cow position: | chr21:22850983-22851180 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 210-401 |
| Cow position: | chr21:26147141-26147325 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 7 |
| Conread position: | 210-402 |
| Cow position: | chr21:6851234-6851432 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 210-404 |
| Cow position: | chr21:24598720-24598912 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 210-406 |
| Cow position: | chr21:32559303-32559101 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 192 |
| Conread position: | 214-387 |
| Cow position: | chr21:22861068-22861244 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 214-401 |
| Cow position: | chr21:438631-438822 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 215-394 |
| Cow position: | chr21:2785419-2785242 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 215-399 |
| Cow position: | chr21:42146213-42146408 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 90 |
| Conread position: | 215-402 |
| Cow position: | chr21:46451887-46451705 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 114 |
| Conread position: | 216-360 |
| Cow position: | chr21:13043952-13043800 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 217-399 |
| Cow position: | chr21:42189688-42189496 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 218-400 |
| Cow position: | chr21:2294099-2294275 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 218-404 |
| Cow position: | chr21:15869760-15869956 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 219-394 |
| Cow position: | chr21:30977185-30977009 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 220-406 |
| Cow position: | chr21:34737238-34737434 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 66, 142 |
| Conread position: | 221-406 |
| Cow position: | chr21:27521266-27521069 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 225-404 |
| Cow position: | chr21:19702814-19702999 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 225-404 |
| Cow position: | chr21:37361165-37360970 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 226-398 |
| Cow position: | chr21:43642617-43642781 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 227-404 |
| Cow position: | chr21:30970014-30970204 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 145 |
| Conread position: | 229-399 |
| Cow position: | chr21:6945456-6945624 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 229-404 |
| Cow position: | chr21:22720653-22720836 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 235-395 |
| Cow position: | chr21:37495859-37495684 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 235-403 |
| Cow position: | chr21:8523728-8523900 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 241-404 |
| Cow position: | chr21:11678219-11678053 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 242-401 |
| Cow position: | chr21:21158905-21159069 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 242-405 |
| Cow position: | chr21:29011876-29011706 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 244-386 |
| Cow position: | chr21:3634867-3634723 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 244-394 |
| Cow position: | chr21:31462658-31462816 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 247-404 |
| Cow position: | chr21:32536495-32536660 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 248-399 |
| Cow position: | chr21:8359125-8358965 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 248-405 |
| Cow position: | chr21:18495321-18495486 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 249-402 |
| Cow position: | chr21:742378-742541 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 251-404 |
| Cow position: | chr21:21145500-21145657 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 268-402 |
| Cow position: | chr21:30368196-30368341 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 276-403 |
| Cow position: | chr21:3236638-3236771 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 276-404 |
| Cow position: | chr21:33244743-33244613 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 276-404 |
| Cow position: | chr21:38867239-38867108 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 278-403 |
| Cow position: | chr21:1295859-1295993 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 278-404 |
| Cow position: | chr21:23348460-23348331 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 294-393 |
| Cow position: | chr21:30167723-30167621 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.