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Cow genome map

           
Conread name:
           
Fet1-UMC-pd20fet-008-d08
        

               
Conread position:
               
120-404
               

               
Cow position:
               
chr7:14029262-14029553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
168-345
               

               
Cow position:
               
chr7:9926736-9926555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
179-399
               

               
Cow position:
               
chr7:18247819-18247596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
182-406
               

               
Cow position:
               
chr7:10162-10397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr7:40305237-40305007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
111, 7
               

               
Conread position:
               
189-399
               

               
Cow position:
               
chr7:23491655-23491867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
190-331
               

               
Cow position:
               
chr7:40067683-40067825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
190-332
               

               
Cow position:
               
chr7:15739564-15739420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
190-360
               

               
Cow position:
               
chr7:59258623-59258451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
190-386
               

               
Cow position:
               
chr7:3336529-3336332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
190-386
               

               
Cow position:
               
chr7:10885984-10886173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
190-388
               

               
Cow position:
               
chr7:19981825-19981637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-390
               

               
Cow position:
               
chr7:34464380-34464587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr7:7535561-7535771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr7:18947725-18947523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr7:18388378-18388157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr7:24220689-24220888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr7:25722643-25722435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-395
               

               
Cow position:
               
chr7:29505136-29505350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr7:28441199-28441416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr7:32807478-32807688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr7:55316178-55315963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr7:14520020-14519800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr7:33697976-33698195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr7:40894562-40894767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr7:52295149-52295359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr7:56081617-56081811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr7:11176708-11176492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr7:34554287-34554489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr7:48721878-48721661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr7:57506763-57506542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
190-402
               

               
Cow position:
               
chr7:14524500-14524716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
190-402
               

               
Cow position:
               
chr7:14536256-14536043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-402
               

               
Cow position:
               
chr7:51019799-51020026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr7:4892885-4893095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr7:15570059-15570283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr7:23251541-23251338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr7:59689870-59689670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-403
               

               
Cow position:
               
chr7:64573038-64572814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:600357-600562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:4129759-4129540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:6058149-6058353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:6116344-6116120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:11066504-11066717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:14006962-14006754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:15855301-15855096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:19797908-19797679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:20918328-20918116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:30931952-30931736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:33720056-33720282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:34412252-34412057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:40321507-40321726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:41729282-41729060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:48020441-48020672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:62953535-62953758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr7:63300221-63300447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr7:2896788-2896984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr7:4582707-4582481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr7:19466229-19466010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr7:59438472-59438700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr7:60547644-60547421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr7:38429691-38429468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr7:39131477-39131253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr7:59688567-59688785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr7:16022316-16022543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
191-401
               

               
Cow position:
               
chr7:40322650-40322852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr7:31315331-31315549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr7:64135444-64135230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr7:23090121-23089912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr7:42899094-42898883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
192-401
               

               
Cow position:
               
chr7:1761754-1761975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
192-401
               

               
Cow position:
               
chr7:42296051-42295847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr7:1262052-1262256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr7:57537500-57537292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr7:69066719-69066925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
192-404
               

               
Cow position:
               
chr7:51685037-51685262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr7:37444888-37445094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
192-408
               

               
Cow position:
               
chr7:45747822-45747623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
192-410
               

               
Cow position:
               
chr7:8089188-8089415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
193-332
               

               
Cow position:
               
chr7:24460975-24461117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr7:29345879-29345674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr7:40263629-40263427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr7:44596674-44596462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr7:2897193-2897391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr7:52378655-52378868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr7:56557123-56556905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr7:52536229-52536017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
194-393
               

               
Cow position:
               
chr7:43484510-43484297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
194-393
               

               
Cow position:
               
chr7:46818469-46818264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
194-394
               

               
Cow position:
               
chr7:32946093-32946303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-395
               

               
Cow position:
               
chr7:56838481-56838285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
194-398
               

               
Cow position:
               
chr7:18464459-18464254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr7:11796877-11796658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr7:20537392-20537600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr7:53053378-53053160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr7:60869973-60870171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr7:61699669-61699462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr7:9077785-9077561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr7:11897490-11897709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr7:22793369-22793582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-406
               

               
Cow position:
               
chr7:4138731-4138512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
194-406
               

               
Cow position:
               
chr7:12495095-12494873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
194-409
               

               
Cow position:
               
chr7:11960422-11960643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
195-394
               

               
Cow position:
               
chr7:15548059-15548267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
195-405
               

               
Cow position:
               
chr7:5199522-5199310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
196-393
               

               
Cow position:
               
chr7:30017488-30017286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
196-396
               

               
Cow position:
               
chr7:48667442-48667641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
197-399
               

               
Cow position:
               
chr7:32884193-32884396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr7:8658544-8658751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr7:62498020-62497816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr7:10448773-10448576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr7:29300738-29300536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-402
               

               
Cow position:
               
chr7:6044108-6043892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
198-402
               

               
Cow position:
               
chr7:20534901-20535117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
198-402
               

               
Cow position:
               
chr7:37361909-37362097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr7:43908235-43908441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr7:53785951-53785743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr7:15559716-15559931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
198-405
               

               
Cow position:
               
chr7:4764875-4765087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr7:40567097-40567303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr7:47547438-47547656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr7:49417635-49417855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr7:54712450-54712666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
199-397
               

               
Cow position:
               
chr7:10415104-10414900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
199-398
               

               
Cow position:
               
chr7:10599651-10599451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
199-398
               

               
Cow position:
               
chr7:31170918-31170718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
199-404
               

               
Cow position:
               
chr7:29474700-29474905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
200-399
               

               
Cow position:
               
chr7:32324232-32324437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
200-404
               

               
Cow position:
               
chr7:12330200-12329979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
200-406
               

               
Cow position:
               
chr7:42335357-42335571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
205-404
               

               
Cow position:
               
chr7:30011866-30012076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
206-398
               

               
Cow position:
               
chr7:11785008-11784804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr7:2505591-2505393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr7:4868499-4868704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
208-402
               

               
Cow position:
               
chr7:27387937-27387750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr7:7510815-7510605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
208-406
               

               
Cow position:
               
chr7:19652400-19652189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr7:54513366-54513167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr7:29479567-29479762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
209-399
               

               
Cow position:
               
chr7:10559942-10559740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr7:20448-20634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr7:33104201-33104396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr7:54108826-54108624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr7:30277372-30277562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr7:40414958-40414755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr7:64003505-64003690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
210-398
               

               
Cow position:
               
chr7:29509984-29510175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-400
               

               
Cow position:
               
chr7:18544341-18544147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
210-400
               

               
Cow position:
               
chr7:40406689-40406886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr7:23762015-23762212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr7:49106159-49105957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr7:53653721-53653524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr7:39415950-39416152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-404
               

               
Cow position:
               
chr7:15534037-15533836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
210-407
               

               
Cow position:
               
chr7:36996402-36996607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
212-404
               

               
Cow position:
               
chr7:14534965-14535167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr7:25263412-25263610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr7:63101463-63101647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
214-399
               

               
Cow position:
               
chr7:44574266-44574462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
214-399
               

               
Cow position:
               
chr7:54090536-54090728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr7:52591954-52591757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
215-405
               

               
Cow position:
               
chr7:17752754-17752557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr7:68144563-68144759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
217-392
               

               
Cow position:
               
chr7:42943357-42943540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr7:31049542-31049356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
219-385
               

               
Cow position:
               
chr7:17990930-17991106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
219-399
               

               
Cow position:
               
chr7:28428335-28428512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
219-404
               

               
Cow position:
               
chr7:32260147-32259950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
219-404
               

               
Cow position:
               
chr7:38084367-38084563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
219-406
               

               
Cow position:
               
chr7:24168558-24168738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
219-409
               

               
Cow position:
               
chr7:45748987-45748806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
220-386
               

               
Cow position:
               
chr7:5300110-5299950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr7:23671802-23671997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
220-402
               

               
Cow position:
               
chr7:12918527-12918337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
220-402
               

               
Cow position:
               
chr7:24022413-24022228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
221-402
               

               
Cow position:
               
chr7:50442843-50442650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
221-404
               

               
Cow position:
               
chr7:36248149-36248339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 5
               

               
Conread position:
               
223-383
               

               
Cow position:
               
chr7:11884228-11884057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
223-400
               

               
Cow position:
               
chr7:9054048-9054222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 92
               

               
Conread position:
               
223-405
               

               
Cow position:
               
chr7:58170792-58170972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 92
               

               
Conread position:
               
224-394
               

               
Cow position:
               
chr7:25087301-25087479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
228-398
               

               
Cow position:
               
chr7:21483125-21482958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
228-398
               

               
Cow position:
               
chr7:51621454-51621632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
228-399
               

               
Cow position:
               
chr7:206483-206656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
229-395
               

               
Cow position:
               
chr7:48675779-48675618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
229-400
               

               
Cow position:
               
chr7:44698432-44698611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
229-402
               

               
Cow position:
               
chr7:39518568-39518746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 148
               

               
Conread position:
               
230-403
               

               
Cow position:
               
chr7:39528725-39528546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
231-402
               

               
Cow position:
               
chr7:9017732-9017904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
231-402
               

               
Cow position:
               
chr7:40344811-40344633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
231-405
               

               
Cow position:
               
chr7:19329247-19329061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
232-402
               

               
Cow position:
               
chr7:5724241-5724422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
233-404
               

               
Cow position:
               
chr7:9858418-9858599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr7:23255818-23256002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
235-406
               

               
Cow position:
               
chr7:53271077-53271258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
238-363
               

               
Cow position:
               
chr7:43055518-43055392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
241-400
               

               
Cow position:
               
chr7:9449585-9449426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
241-402
               

               
Cow position:
               
chr7:23679513-23679347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
242-401
               

               
Cow position:
               
chr7:38357568-38357405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
242-406
               

               
Cow position:
               
chr7:44942629-44942807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
243-398
               

               
Cow position:
               
chr7:32436728-32436575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
246-395
               

               
Cow position:
               
chr7:48900637-48900797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
248-387
               

               
Cow position:
               
chr7:11945961-11946110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
248-395
               

               
Cow position:
               
chr7:14812052-14811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
248-402
               

               
Cow position:
               
chr7:50075664-50075507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
248-406
               

               
Cow position:
               
chr7:20181120-20180953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 157
               

               
Conread position:
               
258-404
               

               
Cow position:
               
chr7:1763512-1763665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
262-395
               

               
Cow position:
               
chr7:49192781-49192922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 139
               

               
Conread position:
               
271-404
               

               
Cow position:
               
chr7:30666726-30666859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
271-404
               

               
Cow position:
               
chr7:32373138-32373281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
276-402
               

               
Cow position:
               
chr7:49222336-49222208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
277-404
               

               
Cow position:
               
chr7:34224254-34224383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 55
               
Show alignments to all cow chromosomes.