Cow genome map
Conread name: | Fet1-UMC-pd20fet-013-h01 |
Conread position: | 3-409 |
Cow position: | chr12:18467511-18467081 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 284 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 27, 79 |
Conread position: | 8-227 |
Cow position: | chr12:19861413-19861185 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 178 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 14-414 |
Cow position: | chr12:21091061-21091452 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 243 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 14, 215 |
Conread position: | 15-199 |
Cow position: | chr12:41338518-41338706 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 15-306 |
Cow position: | chr12:25260805-25261098 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 22-276 |
Cow position: | chr12:23159709-23159968 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 129 |
Conread position: | 26-259 |
Cow position: | chr12:10358395-10358159 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 180 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 49, 173 |
Conread position: | 26-305 |
Cow position: | chr12:3717573-3717855 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr12:17717998-17717715 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 166 |
Conread position: | 26-306 |
Cow position: | chr12:21074516-21074223 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 207 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 56, 119 |
Conread position: | 26-306 |
Cow position: | chr12:22202971-22203257 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 162 |
Conread position: | 26-418 |
Cow position: | chr12:251142-251559 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-418 |
Cow position: | chr12:33122075-33121676 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 29 |
Conread position: | 33-306 |
Cow position: | chr12:18585366-18585090 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 33-306 |
Cow position: | chr12:32656245-32655969 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 164 |
Conread position: | 45-306 |
Cow position: | chr12:1407511-1407250 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 79 |
Conread position: | 79-406 |
Cow position: | chr12:24432252-24432596 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 243 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 78, 19 |
Conread position: | 266-414 |
Cow position: | chr12:32655988-32655839 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 60 |
Conread position: | 280-415 |
Cow position: | chr12:757872-757737 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 286-418 |
Cow position: | chr12:22565482-22565346 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 288-412 |
Cow position: | chr12:15949393-15949521 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 107 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 288-418 |
Cow position: | chr12:30686155-30686024 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 289-414 |
Cow position: | chr12:1404682-1404552 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:3363354-3363226 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 8, 121 |
Conread position: | 289-414 |
Cow position: | chr12:14213758-14213887 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:15775817-15775688 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:17717710-17717581 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:21211084-21210955 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:21430372-21430243 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:22571256-22571132 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 8, 39 |
Conread position: | 289-414 |
Cow position: | chr12:24993558-24993687 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:33926110-33926239 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:34175766-34175638 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 8, 115 |
Conread position: | 289-414 |
Cow position: | chr12:35548719-35548848 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr12:38892771-38892642 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-418 |
Cow position: | chr12:11100657-11100527 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 109 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 289-418 |
Cow position: | chr12:37561418-37561288 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 8, 46 |
Conread position: | 289-418 |
Cow position: | chr12:42857117-42857247 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 296-418 |
Cow position: | chr12:19872683-19872565 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 11, 37 |
Conread position: | 306-414 |
Cow position: | chr12:21252189-21252297 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr12:24980073-24979968 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 91 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-414 |
Cow position: | chr12:25266945-25267053 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr12:1407224-1407112 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr12:3179760-3179652 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 306-418 |
Cow position: | chr12:3717882-3717994 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr12:12755767-12755879 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr12:16818565-16818453 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 88 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr12:20460833-20460942 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-418 |
Cow position: | chr12:22203293-22203402 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-418 |
Cow position: | chr12:24030553-24030665 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr12:31331936-31332045 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-418 |
Cow position: | chr12:36212645-36212532 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 99 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 313-414 |
Cow position: | chr12:23257213-23257314 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 83 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.