Cow genome map

Conread name: Fet1-UMC-pd20fet-013-h01

Conread position: 3-409
Cow position: chr12:18467511-18467081 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 284
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 79

Conread position: 8-227
Cow position: chr12:19861413-19861185 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 14-414
Cow position: chr12:21091061-21091452 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 14, 215

Conread position: 15-199
Cow position: chr12:41338518-41338706 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 15-306
Cow position: chr12:25260805-25261098 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 22-276
Cow position: chr12:23159709-23159968 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 129

Conread position: 26-259
Cow position: chr12:10358395-10358159 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 173

Conread position: 26-305
Cow position: chr12:3717573-3717855 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-306
Cow position: chr12:17717998-17717715 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 166

Conread position: 26-306
Cow position: chr12:21074516-21074223 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 119

Conread position: 26-306
Cow position: chr12:22202971-22203257 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 26-418
Cow position: chr12:251142-251559 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-418
Cow position: chr12:33122075-33121676 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 29

Conread position: 33-306
Cow position: chr12:18585366-18585090 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 33-306
Cow position: chr12:32656245-32655969 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 45-306
Cow position: chr12:1407511-1407250 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 79-406
Cow position: chr12:24432252-24432596 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 78, 19

Conread position: 266-414
Cow position: chr12:32655988-32655839 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 60

Conread position: 280-415
Cow position: chr12:757872-757737 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 286-418
Cow position: chr12:22565482-22565346 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 288-412
Cow position: chr12:15949393-15949521 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 288-418
Cow position: chr12:30686155-30686024 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 289-414
Cow position: chr12:1404682-1404552 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:3363354-3363226 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 121

Conread position: 289-414
Cow position: chr12:14213758-14213887 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:15775817-15775688 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:17717710-17717581 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:21211084-21210955 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:21430372-21430243 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:22571256-22571132 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 39

Conread position: 289-414
Cow position: chr12:24993558-24993687 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:33926110-33926239 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:34175766-34175638 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 115

Conread position: 289-414
Cow position: chr12:35548719-35548848 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr12:38892771-38892642 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 289-418
Cow position: chr12:11100657-11100527 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 53

Conread position: 289-418
Cow position: chr12:37561418-37561288 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 46

Conread position: 289-418
Cow position: chr12:42857117-42857247 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 53

Conread position: 296-418
Cow position: chr12:19872683-19872565 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 37

Conread position: 306-414
Cow position: chr12:21252189-21252297 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr12:24980073-24979968 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 306-414
Cow position: chr12:25266945-25267053 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr12:1407224-1407112 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr12:3179760-3179652 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 306-418
Cow position: chr12:3717882-3717994 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr12:12755767-12755879 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr12:16818565-16818453 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr12:20460833-20460942 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 306-418
Cow position: chr12:22203293-22203402 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 306-418
Cow position: chr12:24030553-24030665 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr12:31331936-31332045 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 306-418
Cow position: chr12:36212645-36212532 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 313-414
Cow position: chr12:23257213-23257314 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.