Cow genome map

Conread name: Fet1-UMC-pd20fet-013-h01

Conread position: 1-418
Cow position: chr13:34870476-34870031 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 4-188
Cow position: chr13:60425540-60425346 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 13-414
Cow position: chr13:60698300-60698721 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 114

Conread position: 14-304
Cow position: chr13:32982896-32983190 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 15-231
Cow position: chr13:50080679-50080899 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 15-306
Cow position: chr13:561886-562181 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 15-306
Cow position: chr13:17310918-17310625 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 191

Conread position: 15-306
Cow position: chr13:31731069-31731357 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 84

Conread position: 15-306
Cow position: chr13:34509315-34509604 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 131

Conread position: 15-306
Cow position: chr13:35539667-35539371 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 15-306
Cow position: chr13:47729535-47729240 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 15-418
Cow position: chr13:34906066-34906456 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 199

Conread position: 20-167
Cow position: chr13:34298084-34297933 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 90

Conread position: 21-298
Cow position: chr13:32922781-32923058 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 21-299
Cow position: chr13:13902355-13902074 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 21-306
Cow position: chr13:13327432-13327149 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 150

Conread position: 21-418
Cow position: chr13:18330632-18331038 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 242

Conread position: 25-255
Cow position: chr13:16807086-16806853 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 26-297
Cow position: chr13:36936220-36935947 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 90

Conread position: 26-299
Cow position: chr13:34039852-34040128 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-306
Cow position: chr13:4943874-4943591 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-306
Cow position: chr13:5499498-5499781 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 26-306
Cow position: chr13:15921969-15922252 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-306
Cow position: chr13:19566207-19565920 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 179

Conread position: 26-306
Cow position: chr13:19637634-19637352 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 195

Conread position: 26-306
Cow position: chr13:32080353-32080070 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-306
Cow position: chr13:35760046-35759765 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 215

Conread position: 26-306
Cow position: chr13:36672145-36671861 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-306
Cow position: chr13:60647096-60647375 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 26-308
Cow position: chr13:24932304-24932589 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 26-414
Cow position: chr13:49976157-49975750 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 95

Conread position: 26-418
Cow position: chr13:30305680-30305265 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 270
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 102

Conread position: 26-418
Cow position: chr13:30469887-30470295 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 26-418
Cow position: chr13:32549248-32548828 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 27-305
Cow position: chr13:5261242-5260976 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 154

Conread position: 33-199
Cow position: chr13:35685862-35685695 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 33-306
Cow position: chr13:6665652-6665928 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 33-418
Cow position: chr13:15279315-15279722 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 179, 42

Conread position: 85-414
Cow position: chr13:49613113-49613461 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 150, 110

Conread position: 85-418
Cow position: chr13:37489136-37489462 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 187

Conread position: 107-415
Cow position: chr13:31728493-31728825 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 283

Conread position: 108-418
Cow position: chr13:34344315-34343981 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 45

Conread position: 112-418
Cow position: chr13:54312461-54312172 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 159, 0

Conread position: 116-418
Cow position: chr13:14400724-14401030 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 89, 98

Conread position: 272-412
Cow position: chr13:1142255-1142400 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 288-414
Cow position: chr13:34322799-34322930 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 288-418
Cow position: chr13:30653084-30653215 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 288-418
Cow position: chr13:32734985-32735116 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 84

Conread position: 289-414
Cow position: chr13:562186-562315 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr13:3023081-3023208 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 8

Conread position: 289-414
Cow position: chr13:6360047-6359918 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 289-414
Cow position: chr13:8068952-8069081 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr13:11389408-11389279 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr13:11737957-11737828 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr13:16921662-16921533 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr13:19565915-19565789 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 53

Conread position: 289-414
Cow position: chr13:35539366-35539237 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 289-414
Cow position: chr13:60647380-60647507 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 39

Conread position: 289-418
Cow position: chr13:21838013-21838145 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 85

Conread position: 289-418
Cow position: chr13:32923071-32923202 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 297-415
Cow position: chr13:669437-669318 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 297-415
Cow position: chr13:32321386-32321506 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 297-418
Cow position: chr13:3652073-3652192 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 306-412
Cow position: chr13:3692767-3692873 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr13:3555591-3555483 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr13:17310599-17310491 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr13:21401021-21400915 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 306-414
Cow position: chr13:21698458-21698351 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 306-414
Cow position: chr13:28527727-28527833 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 306-414
Cow position: chr13:32983218-32983326 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr13:33523776-33523884 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr13:50111649-50111541 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 306-414
Cow position: chr13:50191445-50191554 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 306-414
Cow position: chr13:60511757-60511649 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 306-415
Cow position: chr13:11827544-11827650 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 306-415
Cow position: chr13:22274993-22274883 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 306-415
Cow position: chr13:47576274-47576169 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 306-418
Cow position: chr13:4486034-4485922 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr13:4733713-4733602 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 306-418
Cow position: chr13:4735457-4735346 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 306-418
Cow position: chr13:11762455-11762567 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr13:21879630-21879742 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 100
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 306-418
Cow position: chr13:31609614-31609723 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 306-418
Cow position: chr13:34509630-34509739 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 306-418
Cow position: chr13:35759739-35759627 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 306-422
Cow position: chr13:15559515-15559399 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 306-423
Cow position: chr13:42089259-42089376 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-423
Cow position: chr13:42089507-42089624 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 310-414
Cow position: chr13:23455615-23455511 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 310-418
Cow position: chr13:5623574-5623682 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 310-418
Cow position: chr13:6665958-6666069 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 310-418
Cow position: chr13:61953414-61953310 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Show alignments to all cow chromosomes.