Cow genome map
Conread name: | Fet1-UMC-pd20fet-013-h01 |
Conread position: | 3-418 |
Cow position: | chr18:16146217-16146632 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 285 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 79, 48 |
Conread position: | 14-291 |
Cow position: | chr18:35291363-35291087 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 162 |
Conread position: | 15-294 |
Cow position: | chr18:47744561-47744278 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 15-298 |
Cow position: | chr18:37508775-37508489 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 226 |
Conread position: | 15-306 |
Cow position: | chr18:23702272-23702567 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 15-306 |
Cow position: | chr18:51460030-51460325 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 174 |
Conread position: | 15-306 |
Cow position: | chr18:54066240-54066527 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 180 |
Conread position: | 15-414 |
Cow position: | chr18:37700683-37701107 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 261 |
Conread position: | 15-418 |
Cow position: | chr18:5535791-5535372 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 279 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 9, 30 |
Conread position: | 15-423 |
Cow position: | chr18:36776085-36775649 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 16 |
Conread position: | 21-297 |
Cow position: | chr18:56483874-56484151 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 245 |
Conread position: | 23-306 |
Cow position: | chr18:51662951-51662665 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 25-223 |
Cow position: | chr18:699973-700173 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 156 |
Conread position: | 26-152 |
Cow position: | chr18:52573912-52573783 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr18:11272047-11272332 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 176 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr18:16081324-16081041 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr18:16092617-16092334 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 26-306 |
Cow position: | chr18:16173812-16174091 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 26-306 |
Cow position: | chr18:22182740-22183013 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 26-306 |
Cow position: | chr18:29863807-29864090 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr18:32165134-32165413 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 170 |
Conread position: | 26-306 |
Cow position: | chr18:40483793-40483522 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 210 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 49, 139 |
Conread position: | 26-306 |
Cow position: | chr18:51344903-51344620 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr18:52630460-52630732 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 179 |
Conread position: | 26-306 |
Cow position: | chr18:52655610-52655330 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 26-306 |
Cow position: | chr18:54026606-54026316 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 26-306 |
Cow position: | chr18:54032509-54032226 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-418 |
Cow position: | chr18:38090558-38090967 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 145 |
Conread position: | 45-414 |
Cow position: | chr18:29071207-29070833 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 45-418 |
Cow position: | chr18:36511400-36511001 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 282 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 37, 322 |
Conread position: | 84-406 |
Cow position: | chr18:16391435-16391752 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 222 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 87-419 |
Cow position: | chr18:37491545-37491203 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 238 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 70, 76 |
Conread position: | 108-414 |
Cow position: | chr18:27835371-27835702 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 231 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 93, 238 |
Conread position: | 180-414 |
Cow position: | chr18:1046990-1046739 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 179 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 209-418 |
Cow position: | chr18:39813033-39813251 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 152 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 275-418 |
Cow position: | chr18:51484121-51483975 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 285-418 |
Cow position: | chr18:27168139-27168007 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 288-412 |
Cow position: | chr18:54026312-54026187 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 288-418 |
Cow position: | chr18:4948457-4948325 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 113 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 9, 54 |
Conread position: | 289-409 |
Cow position: | chr18:18216019-18215895 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 104 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:1956658-1956787 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:3755455-3755326 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:16081036-16080907 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:19354874-19354745 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:21530036-21529910 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 289-414 |
Cow position: | chr18:25941414-25941285 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 289-414 |
Cow position: | chr18:28767313-28767184 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:30762447-30762576 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:32437591-32437720 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:33987971-33987842 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:35295686-35295557 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:47744006-47743877 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:51662660-51662531 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr18:55417235-55417109 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 289-418 |
Cow position: | chr18:23801533-23801403 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 108 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-418 |
Cow position: | chr18:26244067-26244197 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 289-418 |
Cow position: | chr18:28929080-28929207 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 8, 39 |
Conread position: | 289-418 |
Cow position: | chr18:29864095-29864227 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 298-412 |
Cow position: | chr18:27538915-27538802 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 99 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 9, 41 |
Conread position: | 306-407 |
Cow position: | chr18:5202016-5201915 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr18:51460351-51460456 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-414 |
Cow position: | chr18:51696784-51696675 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 91 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 306-415 |
Cow position: | chr18:32656180-32656071 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr18:14132885-14132773 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr18:16092308-16092196 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr18:17322896-17322785 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 306-418 |
Cow position: | chr18:25922882-25922770 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 95 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr18:28969797-28969906 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-418 |
Cow position: | chr18:33101816-33101704 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr18:37664890-37664779 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 307-418 |
Cow position: | chr18:36647663-36647552 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 318-414 |
Cow position: | chr18:32165447-32165543 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 82 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.