Cow genome map
Conread name: | Fet1-UMC-pd20fet-013-h01 |
Conread position: | 1-298 |
Cow position: | chr21:4186852-4186550 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 1-306 |
Cow position: | chr21:2538244-2538554 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 220 |
Conread position: | 3-305 |
Cow position: | chr21:995535-995833 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 166 |
Conread position: | 13-306 |
Cow position: | chr21:17223954-17224247 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 207 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 58, 138 |
Conread position: | 14-204 |
Cow position: | chr21:37123335-37123533 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 15-164 |
Cow position: | chr21:2768951-2769101 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 15-166 |
Cow position: | chr21:4586812-4586964 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 83 |
Conread position: | 15-220 |
Cow position: | chr21:3923152-3922943 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 15-284 |
Cow position: | chr21:28258561-28258295 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 236 |
Conread position: | 15-306 |
Cow position: | chr21:34255701-34255997 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 170 |
Conread position: | 15-306 |
Cow position: | chr21:34656845-34656557 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 78 |
Conread position: | 15-414 |
Cow position: | chr21:39225170-39225594 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 292 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 15, 296 |
Conread position: | 15-415 |
Cow position: | chr21:28878826-28879251 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 161 |
Conread position: | 20-306 |
Cow position: | chr21:2513732-2513447 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 164 |
Conread position: | 20-306 |
Cow position: | chr21:32397165-32397455 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 20-415 |
Cow position: | chr21:21171425-21171827 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 118 |
Conread position: | 20-424 |
Cow position: | chr21:35390260-35390679 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 297 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 10, 34 |
Conread position: | 26-305 |
Cow position: | chr21:25189520-25189238 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 26-306 |
Cow position: | chr21:1195416-1195138 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 255 |
Conread position: | 26-306 |
Cow position: | chr21:2878949-2879232 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-306 |
Cow position: | chr21:4899086-4899357 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 49, 174 |
Conread position: | 26-306 |
Cow position: | chr21:15398097-15398380 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 26-306 |
Cow position: | chr21:30564629-30564351 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 26-306 |
Cow position: | chr21:30596211-30596493 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 26-306 |
Cow position: | chr21:36375866-36375584 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 84 |
Conread position: | 26-306 |
Cow position: | chr21:47648216-47647931 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-309 |
Cow position: | chr21:5020022-5019738 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 26-410 |
Cow position: | chr21:31251875-31251475 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 227 |
Conread position: | 26-418 |
Cow position: | chr21:1285379-1285771 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 32 |
Conread position: | 26-418 |
Cow position: | chr21:2419076-2418664 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 121 |
Conread position: | 26-418 |
Cow position: | chr21:26400888-26401292 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 327 |
Conread position: | 33-304 |
Cow position: | chr21:19351991-19352265 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 33-306 |
Cow position: | chr21:27620624-27620902 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 59-425 |
Cow position: | chr21:19613583-19613212 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 164-418 |
Cow position: | chr21:27610023-27610284 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 181 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 92, 52 |
Conread position: | 287-418 |
Cow position: | chr21:2538557-2538691 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 63 |
Conread position: | 288-406 |
Cow position: | chr21:7154926-7154804 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 102 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 288-414 |
Cow position: | chr21:27068369-27068499 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 288-414 |
Cow position: | chr21:27620906-27621035 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 108 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 9, 48 |
Conread position: | 288-418 |
Cow position: | chr21:3805519-3805385 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 288-418 |
Cow position: | chr21:34256001-34256132 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 54 |
Conread position: | 289-401 |
Cow position: | chr21:4481887-4481771 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-410 |
Cow position: | chr21:33317915-33318037 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 10, 73 |
Conread position: | 289-414 |
Cow position: | chr21:4036843-4036715 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 8, 59 |
Conread position: | 289-414 |
Cow position: | chr21:4091924-4091799 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 8, 52 |
Conread position: | 289-414 |
Cow position: | chr21:4899584-4899714 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 8, 81 |
Conread position: | 289-414 |
Cow position: | chr21:7038940-7038811 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr21:7063079-7063208 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr21:11291279-11291151 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 107 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 289-414 |
Cow position: | chr21:26634567-26634696 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr21:37373817-37373688 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr21:41797132-41797261 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr21:47976427-47976298 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-417 |
Cow position: | chr21:35143316-35143445 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 289-418 |
Cow position: | chr21:27148965-27149098 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-418 |
Cow position: | chr21:28853256-28853388 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 289-418 |
Cow position: | chr21:30596498-30596631 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-418 |
Cow position: | chr21:31513728-31513859 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 292-415 |
Cow position: | chr21:4736877-4736999 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 294-418 |
Cow position: | chr21:9894729-9894606 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 13, 45 |
Conread position: | 297-409 |
Cow position: | chr21:37040037-37040148 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 10, 69 |
Conread position: | 297-415 |
Cow position: | chr21:41797-41681 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 10, 35 |
Conread position: | 298-414 |
Cow position: | chr21:11508189-11508072 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 9, 97 |
Conread position: | 298-418 |
Cow position: | chr21:5011157-5011278 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 303-414 |
Cow position: | chr21:32397478-32397589 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 93 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-413 |
Cow position: | chr21:36375558-36375451 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 89 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr21:2513421-2513313 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr21:7163411-7163519 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 86 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr21:19352495-19352387 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 94 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr21:29949395-29949501 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 306-418 |
Cow position: | chr21:1195112-1195003 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-418 |
Cow position: | chr21:2665569-2665681 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr21:4186514-4186406 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 95 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 306-418 |
Cow position: | chr21:5019715-5019604 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 306-418 |
Cow position: | chr21:22943186-22943074 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 56, 15 |
Conread position: | 306-418 |
Cow position: | chr21:44254192-44254080 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 96 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 307-414 |
Cow position: | chr21:39427645-39427538 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 88 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 307-415 |
Cow position: | chr21:28614885-28614779 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 307-427 |
Cow position: | chr21:3922790-3922670 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 317-418 |
Cow position: | chr21:21026035-21025934 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 83 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 324-418 |
Cow position: | chr21:48529866-48529960 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 79 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.