Cow genome map
Conread name: | Fet1-UMC-pd20fet-013-h01 |
Conread position: | 1-306 |
Cow position: | chr25:18268440-18268749 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 216 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 12-159 |
Cow position: | chr25:18179529-18179378 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 14-159 |
Cow position: | chr25:33837880-33837730 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 14-415 |
Cow position: | chr25:14962439-14962834 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 159 |
Conread position: | 15-297 |
Cow position: | chr25:17554970-17555255 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 168 |
Conread position: | 15-298 |
Cow position: | chr25:26281522-26281235 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 15-305 |
Cow position: | chr25:26901033-26900742 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 100 |
Conread position: | 15-306 |
Cow position: | chr25:19337819-19338110 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 183 |
Conread position: | 15-306 |
Cow position: | chr25:22150574-22150281 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 179 |
Conread position: | 15-306 |
Cow position: | chr25:32578159-32578454 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 15-415 |
Cow position: | chr25:30810307-30809911 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 262 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 15, 34 |
Conread position: | 26-306 |
Cow position: | chr25:18190901-18191183 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 125 |
Conread position: | 26-306 |
Cow position: | chr25:18886981-18887267 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 250 |
Conread position: | 26-306 |
Cow position: | chr25:24655949-24656228 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 97 |
Conread position: | 26-306 |
Cow position: | chr25:34344218-34344497 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 118 |
Conread position: | 26-418 |
Cow position: | chr25:28862357-28861945 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 26-421 |
Cow position: | chr25:13959557-13959144 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 29 |
Conread position: | 28-418 |
Cow position: | chr25:17657130-17656725 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 80 |
Conread position: | 33-196 |
Cow position: | chr25:29313828-29313989 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 49, 108 |
Conread position: | 33-305 |
Cow position: | chr25:17586540-17586812 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 41-419 |
Cow position: | chr25:34667263-34667657 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 120 |
Conread position: | 87-415 |
Cow position: | chr25:18489446-18489091 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 236 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 53, 118 |
Conread position: | 87-418 |
Cow position: | chr25:11930126-11930447 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 80 |
Conread position: | 287-405 |
Cow position: | chr25:12835364-12835486 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 102 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 287-418 |
Cow position: | chr25:17555267-17555395 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 10, 96 |
Conread position: | 289-414 |
Cow position: | chr25:13352169-13352040 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr25:14537462-14537591 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 109 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr25:18191188-18191314 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 289-414 |
Cow position: | chr25:19338115-19338244 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr25:23360388-23360258 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr25:27020131-27020260 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-414 |
Cow position: | chr25:29359228-29359103 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 14, 52 |
Conread position: | 289-414 |
Cow position: | chr25:34510547-34510672 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 289-414 |
Cow position: | chr25:35552888-35552761 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 14, 8 |
Conread position: | 289-418 |
Cow position: | chr25:18887272-18887405 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 109 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 289-418 |
Cow position: | chr25:25509171-25509040 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 8, 50 |
Conread position: | 289-418 |
Cow position: | chr25:34505614-34505746 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 8, 45 |
Conread position: | 289-419 |
Cow position: | chr25:26354804-26354670 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 290-414 |
Cow position: | chr25:20773133-20773261 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 306-414 |
Cow position: | chr25:14559055-14559163 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr25:15617209-15617101 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 93 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-414 |
Cow position: | chr25:19922997-19922889 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr25:10635088-10635200 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr25:11664850-11664739 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 306-418 |
Cow position: | chr25:13785031-13784920 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 306-418 |
Cow position: | chr25:20632071-20631962 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 95 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 306-418 |
Cow position: | chr25:24656254-24656366 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 306-418 |
Cow position: | chr25:26281201-26281092 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 307-418 |
Cow position: | chr25:33837600-33837489 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 320-418 |
Cow position: | chr25:7577104-7577201 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 85 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 15 |
Show alignments to all cow chromosomes.