Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 1-268 |
Cow position: | chr1:39069164-39069448 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-271 |
Cow position: | chr1:55357499-55357766 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 205 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 170, 27 |
Conread position: | 1-276 |
Cow position: | chr1:45289086-45289352 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 47 |
Conread position: | 1-276 |
Cow position: | chr1:75250022-75249752 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 51 |
Conread position: | 2-268 |
Cow position: | chr1:84240685-84240429 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 204 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 167, 17 |
Conread position: | 2-269 |
Cow position: | chr1:61724239-61724497 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 65 |
Conread position: | 2-270 |
Cow position: | chr1:95176721-95176456 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 205 |
Conread position: | 2-271 |
Cow position: | chr1:3963405-3963141 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 117 |
Conread position: | 2-271 |
Cow position: | chr1:92370575-92370841 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 210 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 167, 17 |
Conread position: | 2-276 |
Cow position: | chr1:24561719-24561980 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 197 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 189, 17 |
Conread position: | 2-276 |
Cow position: | chr1:43352865-43353134 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 17 |
Conread position: | 2-276 |
Cow position: | chr1:71691600-71691329 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 201 |
Conread position: | 2-276 |
Cow position: | chr1:72012018-72012291 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 215 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 47, 17 |
Conread position: | 2-276 |
Cow position: | chr1:82936796-82937069 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 207 |
Conread position: | 2-281 |
Cow position: | chr1:71797114-71797385 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 58 |
Conread position: | 2-285 |
Cow position: | chr1:81569249-81569530 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 202 |
Conread position: | 3-261 |
Cow position: | chr1:95017728-95017991 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 190 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 169, 69 |
Conread position: | 3-267 |
Cow position: | chr1:73522359-73522618 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 196 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 60, 24 |
Conread position: | 3-270 |
Cow position: | chr1:60032813-60033081 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 208 |
Conread position: | 3-271 |
Cow position: | chr1:24235733-24235996 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 178 |
Conread position: | 3-271 |
Cow position: | chr1:44164863-44164596 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 200 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 112, 16 |
Conread position: | 3-271 |
Cow position: | chr1:58439261-58439516 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 203 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 194, 36 |
Conread position: | 3-271 |
Cow position: | chr1:101792313-101792568 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 59 |
Conread position: | 3-276 |
Cow position: | chr1:54199595-54199864 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 204 |
Conread position: | 3-276 |
Cow position: | chr1:60120213-60119939 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 205 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 42, 24 |
Conread position: | 3-276 |
Cow position: | chr1:73756878-73756607 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 86 |
Conread position: | 3-276 |
Cow position: | chr1:82378579-82378305 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 203 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 30, 16 |
Conread position: | 3-293 |
Cow position: | chr1:28988907-28989203 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 200 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 61, 87 |
Conread position: | 4-226 |
Cow position: | chr1:101634485-101634266 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 59 |
Conread position: | 4-271 |
Cow position: | chr1:89344693-89344431 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 144 |
Conread position: | 4-271 |
Cow position: | chr1:95499712-95499981 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 16 |
Conread position: | 4-276 |
Cow position: | chr1:46885878-46885607 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 201 |
Conread position: | 4-276 |
Cow position: | chr1:86511945-86511678 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 140 |
Conread position: | 6-291 |
Cow position: | chr1:37309724-37310015 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 12 |
Conread position: | 6-318 |
Cow position: | chr1:69941186-69941489 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 54 |
Conread position: | 7-270 |
Cow position: | chr1:28877137-28876877 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 200 |
Conread position: | 7-270 |
Cow position: | chr1:32108865-32108604 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 183, 200 |
Conread position: | 7-270 |
Cow position: | chr1:76748353-76748613 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 200 |
Conread position: | 7-270 |
Cow position: | chr1:91888206-91888466 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 200 |
Conread position: | 7-317 |
Cow position: | chr1:50656733-50657041 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 201 |
Conread position: | 9-204 |
Cow position: | chr1:18023532-18023723 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 9-244 |
Cow position: | chr1:1801922-1801692 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 182 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 182, 10 |
Conread position: | 9-262 |
Cow position: | chr1:76019899-76020150 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 197 |
Conread position: | 9-268 |
Cow position: | chr1:67821431-67821694 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 169 |
Conread position: | 9-270 |
Cow position: | chr1:52354636-52354892 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 123 |
Conread position: | 9-271 |
Cow position: | chr1:42713802-42714060 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 193 |
Conread position: | 9-271 |
Cow position: | chr1:47791035-47791295 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 149 |
Conread position: | 9-271 |
Cow position: | chr1:62597184-62597442 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr1:66368355-66368613 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr1:78920970-78921228 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 194 |
Conread position: | 9-271 |
Cow position: | chr1:91674270-91674012 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 199 |
Conread position: | 9-272 |
Cow position: | chr1:61330925-61331183 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 199 |
Conread position: | 9-276 |
Cow position: | chr1:21091299-21091036 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 194 |
Conread position: | 9-276 |
Cow position: | chr1:31720266-31720003 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 90 |
Conread position: | 9-276 |
Cow position: | chr1:63049605-63049341 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 198 |
Conread position: | 9-276 |
Cow position: | chr1:89742233-89742496 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 167 |
Conread position: | 12-276 |
Cow position: | chr1:99105106-99105373 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 186 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 22, 201 |
Conread position: | 12-279 |
Cow position: | chr1:7752186-7751919 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 191 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 135, 30 |
Conread position: | 13-270 |
Cow position: | chr1:21506507-21506765 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 198 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 50, 138 |
Conread position: | 16-276 |
Cow position: | chr1:24445955-24446209 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 46 |
Conread position: | 22-271 |
Cow position: | chr1:67008966-67009215 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 186 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 168, 38 |
Conread position: | 25-276 |
Cow position: | chr1:95071471-95071221 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 184 |
Conread position: | 26-276 |
Cow position: | chr1:11728955-11728703 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 131, 187 |
Conread position: | 30-276 |
Cow position: | chr1:93527163-93526926 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 181 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 112, 36 |
Conread position: | 31-276 |
Cow position: | chr1:81363282-81363047 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 196 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 71, 29 |
Conread position: | 34-270 |
Cow position: | chr1:19883594-19883837 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 178 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 55, 119 |
Conread position: | 38-276 |
Cow position: | chr1:100537387-100537156 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 181 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 153, 23 |
Conread position: | 42-271 |
Cow position: | chr1:3924085-3924310 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 10, 24 |
Conread position: | 42-271 |
Cow position: | chr1:52507616-52507841 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 164 |
Conread position: | 42-271 |
Cow position: | chr1:53613451-53613686 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 175 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 71, 174 |
Conread position: | 42-286 |
Cow position: | chr1:69678635-69678875 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 165 |
Conread position: | 44-271 |
Cow position: | chr1:66145704-66145481 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 184, 158 |
Conread position: | 47-271 |
Cow position: | chr1:83583216-83583428 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 143, 52 |
Conread position: | 49-277 |
Cow position: | chr1:59247791-59248021 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 123, 89 |
Conread position: | 52-271 |
Cow position: | chr1:56618960-56619165 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 170 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 138, 86 |
Conread position: | 52-276 |
Cow position: | chr1:43448043-43448259 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 92, 124 |
Conread position: | 55-290 |
Cow position: | chr1:102784514-102784284 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 178 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 135, 122 |
Conread position: | 63-276 |
Cow position: | chr1:54732719-54732925 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 161 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 127, 59 |
Conread position: | 86-288 |
Cow position: | chr1:26838880-26838680 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 104, 121 |
Conread position: | 87-271 |
Cow position: | chr1:16797142-16797323 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 104, 120 |
Conread position: | 113-268 |
Cow position: | chr1:81579275-81579425 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 77, 39 |
Conread position: | 122-271 |
Cow position: | chr1:68845789-68845935 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 123 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 68, 85 |
Conread position: | 130-276 |
Cow position: | chr1:732364-732506 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 60, 77 |
Conread position: | 133-270 |
Cow position: | chr1:47543071-47543205 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 57, 75 |
Conread position: | 138-268 |
Cow position: | chr1:15049783-15049656 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 52, 69 |
Show alignments to all cow chromosomes.