Cow genome map


           Conread name:
           Fet1-UMC-pd20fet-017-h10
        

               Conread position:
               2-265
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 22
               

               Conread position:
               2-265
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 130
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 97
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 58
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 201
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 128
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 42
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 17
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 17
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               167, 15
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 33
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 199
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 22
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 16
               

               Conread position:
               3-272
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               187, 155
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               187, 162
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               160, 19
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               43, 212
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               160, 69
               

               Conread position:
               7-270
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               7-270
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 203
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 201
               

               Conread position:
               7-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               183, 200
               

               Conread position:
               9-197
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-265
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               9-270
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               182, 48
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 193
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 193
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 198
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 198
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 108
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 198
               

               Conread position:
               9-276
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               10-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 9
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 194
               

               Conread position:
               17-276
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 100
               

               Conread position:
               18-271
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 215
               

               Conread position:
               29-276
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 31
               

               Conread position:
               30-270
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               160, 142
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               34-268
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               5, 39
               

               Conread position:
               38-265
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               38-265
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               134, 93
               

               Conread position:
               40-266
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               137, 178
               

               Conread position:
               41-271
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               149, 163
               

               Conread position:
               42-276
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               49-276
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               103, 190
               

               Conread position:
               50-276
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               122, 158
               

               Conread position:
               54-264
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               176, 24
               

               Conread position:
               54-276
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               110, 160
               

               Conread position:
               62-270
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               66-203
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               66-271
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 115
               

               Conread position:
               79-276
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               87-265
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 118
               

               Conread position:
               103-275
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               119-270
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 88
               
Show alignments to all cow chromosomes.