Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 1-276 |
Cow position: | chr17:25541991-25542257 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 189 |
Conread position: | 2-229 |
Cow position: | chr17:11056554-11056785 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 15, 131 |
Conread position: | 2-249 |
Cow position: | chr17:16869457-16869691 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 185 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 243, 110 |
Conread position: | 2-264 |
Cow position: | chr17:4107201-4107455 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 17 |
Conread position: | 2-264 |
Cow position: | chr17:4122936-4123191 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 17 |
Conread position: | 2-265 |
Cow position: | chr17:42258727-42258466 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 201 |
Conread position: | 2-268 |
Cow position: | chr17:21335878-21336139 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 88 |
Conread position: | 2-269 |
Cow position: | chr17:3387114-3386854 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 58 |
Conread position: | 2-271 |
Cow position: | chr17:11912880-11913146 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 205 |
Conread position: | 2-271 |
Cow position: | chr17:12289595-12289865 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 209 |
Conread position: | 2-271 |
Cow position: | chr17:26230759-26230493 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 17 |
Conread position: | 2-271 |
Cow position: | chr17:32651436-32651171 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 204 |
Conread position: | 2-271 |
Cow position: | chr17:35223379-35223103 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 215 |
Conread position: | 2-271 |
Cow position: | chr17:38829903-38829639 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 63 |
Conread position: | 2-276 |
Cow position: | chr17:5695128-5695393 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 207 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 67, 17 |
Conread position: | 2-276 |
Cow position: | chr17:6566291-6566028 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 17 |
Conread position: | 2-276 |
Cow position: | chr17:12059271-12059543 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 205 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 37, 17 |
Conread position: | 2-276 |
Cow position: | chr17:17222162-17221894 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 16 |
Conread position: | 2-276 |
Cow position: | chr17:22135316-22135048 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 199 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 2-276 |
Cow position: | chr17:23101391-23101665 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 51 |
Conread position: | 2-276 |
Cow position: | chr17:28539857-28539590 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 200 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 17, 51 |
Conread position: | 2-317 |
Cow position: | chr17:34208296-34208604 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 17 |
Conread position: | 2-321 |
Cow position: | chr17:10528921-10529239 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 208 |
Conread position: | 3-263 |
Cow position: | chr17:32138581-32138837 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 196 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 227, 57 |
Conread position: | 3-271 |
Cow position: | chr17:11638704-11638440 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 19 |
Conread position: | 3-271 |
Cow position: | chr17:31232111-31232385 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 53, 205 |
Conread position: | 3-276 |
Cow position: | chr17:24549991-24549718 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 204 |
Conread position: | 3-276 |
Cow position: | chr17:35184854-35184581 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 200 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 13, 146 |
Conread position: | 3-281 |
Cow position: | chr17:40892968-40892704 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 196 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 4-248 |
Cow position: | chr17:11618398-11618158 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 177 |
Conread position: | 4-270 |
Cow position: | chr17:2152006-2151746 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 184 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 238, 21 |
Conread position: | 4-270 |
Cow position: | chr17:6155859-6155589 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 210 |
Conread position: | 4-276 |
Cow position: | chr17:2270586-2270312 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 207 |
Conread position: | 4-276 |
Cow position: | chr17:20800634-20800365 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 203 |
Conread position: | 5-271 |
Cow position: | chr17:26828878-26829141 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 197 |
Conread position: | 6-276 |
Cow position: | chr17:7251859-7251599 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 200 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 13, 82 |
Conread position: | 9-265 |
Cow position: | chr17:39735998-39735742 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 10 |
Conread position: | 9-271 |
Cow position: | chr17:4176810-4177069 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr17:7396428-7396689 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 200 |
Conread position: | 9-271 |
Cow position: | chr17:7585283-7585024 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr17:33058745-33059003 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 198 |
Conread position: | 9-276 |
Cow position: | chr17:1971017-1970751 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 149 |
Conread position: | 9-276 |
Cow position: | chr17:11767988-11767717 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 198 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 52, 183 |
Conread position: | 9-317 |
Cow position: | chr17:185010-184707 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 224 |
Conread position: | 12-276 |
Cow position: | chr17:11386326-11386054 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 14-271 |
Cow position: | chr17:20269420-20269166 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 193 |
Conread position: | 20-204 |
Cow position: | chr17:44482662-44482482 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 23-277 |
Cow position: | chr17:15363758-15364019 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 183 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 30, 112 |
Conread position: | 27-271 |
Cow position: | chr17:24824057-24823819 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 33 |
Conread position: | 30-268 |
Cow position: | chr17:4601751-4601984 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 107 |
Conread position: | 30-270 |
Cow position: | chr17:16904420-16904185 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 177 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 197, 80 |
Conread position: | 30-276 |
Cow position: | chr17:18569106-18569352 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 180 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 151, 30 |
Conread position: | 38-271 |
Cow position: | chr17:29356490-29356728 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 45, 18 |
Conread position: | 38-276 |
Cow position: | chr17:5745477-5745716 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 187 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 58, 24 |
Conread position: | 38-276 |
Cow position: | chr17:24293936-24293701 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 160 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 39-276 |
Cow position: | chr17:25141035-25140801 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 133, 53 |
Conread position: | 42-265 |
Cow position: | chr17:40741391-40741169 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 99, 167 |
Conread position: | 44-271 |
Cow position: | chr17:36817688-36817467 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 100, 8 |
Conread position: | 44-279 |
Cow position: | chr17:29080152-29079921 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 114, 28 |
Conread position: | 45-300 |
Cow position: | chr17:32472053-32472306 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 162 |
Conread position: | 49-271 |
Cow position: | chr17:30712813-30712594 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 158 |
Conread position: | 50-276 |
Cow position: | chr17:38363486-38363715 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 170 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 100, 164 |
Conread position: | 63-276 |
Cow position: | chr17:24334446-24334236 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 171 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 127, 145 |
Conread position: | 91-270 |
Cow position: | chr17:18828362-18828536 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 99, 19 |
Conread position: | 93-271 |
Cow position: | chr17:8212834-8212659 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 97, 115 |
Conread position: | 113-268 |
Cow position: | chr17:21756245-21756394 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 62, 35 |
Conread position: | 139-271 |
Cow position: | chr17:1061604-1061733 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 51, 68 |
Show alignments to all cow chromosomes.