Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 1-268 |
Cow position: | chr19:29627605-29627867 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 169, 41 |
Conread position: | 2-204 |
Cow position: | chr19:17795664-17795460 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 50, 111 |
Conread position: | 2-233 |
Cow position: | chr19:44571894-44571669 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 18 |
Conread position: | 2-265 |
Cow position: | chr19:34654810-34655066 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 18 |
Conread position: | 2-266 |
Cow position: | chr19:35018479-35018738 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 17 |
Conread position: | 2-271 |
Cow position: | chr19:39697839-39697576 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 10 |
Conread position: | 2-272 |
Cow position: | chr19:38392566-38392300 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 98 |
Conread position: | 2-276 |
Cow position: | chr19:4445852-4446120 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 97 |
Conread position: | 2-276 |
Cow position: | chr19:46822207-46821942 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 88 |
Conread position: | 2-276 |
Cow position: | chr19:52214856-52214586 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 55 |
Conread position: | 3-270 |
Cow position: | chr19:41139637-41139902 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 205 |
Conread position: | 3-276 |
Cow position: | chr19:32177943-32178211 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 4-270 |
Cow position: | chr19:42417633-42417370 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 203 |
Conread position: | 5-276 |
Cow position: | chr19:2821343-2821068 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 14 |
Conread position: | 6-271 |
Cow position: | chr19:34955933-34956194 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 152 |
Conread position: | 6-276 |
Cow position: | chr19:12788140-12787873 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 209 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 166, 34 |
Conread position: | 7-319 |
Cow position: | chr19:1168830-1169134 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 110 |
Conread position: | 9-204 |
Cow position: | chr19:17884257-17884065 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 158 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 181, 24 |
Conread position: | 9-270 |
Cow position: | chr19:736682-736421 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 199 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 88, 201 |
Conread position: | 9-270 |
Cow position: | chr19:19500600-19500857 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-270 |
Cow position: | chr19:24956673-24956924 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 181, 39 |
Conread position: | 9-271 |
Cow position: | chr19:8039-7781 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 193 |
Conread position: | 9-271 |
Cow position: | chr19:235651-235910 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 197 |
Conread position: | 9-271 |
Cow position: | chr19:7346473-7346215 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 63 |
Conread position: | 9-271 |
Cow position: | chr19:30514949-30515208 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 195 |
Conread position: | 9-271 |
Cow position: | chr19:39924428-39924170 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 76, 36 |
Conread position: | 9-271 |
Cow position: | chr19:43149673-43149415 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 103 |
Conread position: | 9-297 |
Cow position: | chr19:42304528-42304808 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-319 |
Cow position: | chr19:2249391-2249696 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-319 |
Cow position: | chr19:35362466-35362771 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 11-229 |
Cow position: | chr19:23785947-23785729 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 68 |
Conread position: | 12-276 |
Cow position: | chr19:40714918-40714651 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 187 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 155, 201 |
Conread position: | 13-269 |
Cow position: | chr19:55011660-55011408 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 193 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 177, 97 |
Conread position: | 13-270 |
Cow position: | chr19:158110-158359 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 199 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 97, 47 |
Conread position: | 13-276 |
Cow position: | chr19:742420-742676 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 194 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 164, 111 |
Conread position: | 15-276 |
Cow position: | chr19:36722087-36721832 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 45 |
Conread position: | 24-276 |
Cow position: | chr19:29471328-29471075 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 146, 186 |
Conread position: | 28-268 |
Cow position: | chr19:6949642-6949408 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 179 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 28-276 |
Cow position: | chr19:15766846-15766606 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 95 |
Conread position: | 30-276 |
Cow position: | chr19:55783691-55783452 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 190 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 160, 30 |
Conread position: | 33-276 |
Cow position: | chr19:20433175-20433414 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 186 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 157, 6 |
Conread position: | 36-265 |
Cow position: | chr19:51644802-51645030 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 182 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 148, 173 |
Conread position: | 38-271 |
Cow position: | chr19:36059642-36059413 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 38-276 |
Cow position: | chr19:42706634-42706877 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 53, 177 |
Conread position: | 38-280 |
Cow position: | chr19:55210743-55210982 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 187 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 26, 14 |
Conread position: | 42-268 |
Cow position: | chr19:30551775-30551552 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 78, 135 |
Conread position: | 42-276 |
Cow position: | chr19:39602411-39602657 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 41, 182 |
Conread position: | 43-271 |
Cow position: | chr19:35142602-35142823 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 171 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 148, 17 |
Conread position: | 50-270 |
Cow position: | chr19:36844946-36844727 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 174 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 117, 184 |
Conread position: | 51-276 |
Cow position: | chr19:35954614-35954394 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 119, 37 |
Conread position: | 52-276 |
Cow position: | chr19:18016168-18016396 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 180 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 85, 36 |
Conread position: | 57-271 |
Cow position: | chr19:26976293-26976507 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 153 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 113, 155 |
Conread position: | 62-276 |
Cow position: | chr19:28450895-28450685 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 161 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 129, 10 |
Conread position: | 63-271 |
Cow position: | chr19:52305212-52305414 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 156 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 63-276 |
Cow position: | chr19:9704147-9704363 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 161 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 108, 146 |
Conread position: | 74-264 |
Cow position: | chr19:20935413-20935221 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 155 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 76, 140 |
Conread position: | 84-276 |
Cow position: | chr19:8033216-8033027 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 106, 123 |
Conread position: | 106-265 |
Cow position: | chr19:28349112-28349267 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 128 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 84, 101 |
Conread position: | 118-271 |
Cow position: | chr19:33823033-33822883 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 72, 90 |
Show alignments to all cow chromosomes.