Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 1-271 |
Cow position: | chr21:37924358-37924083 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 202 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 19, 163 |
Conread position: | 1-276 |
Cow position: | chr21:9862781-9863052 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 168, 34 |
Conread position: | 2-201 |
Cow position: | chr21:23822011-23821813 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 2-265 |
Cow position: | chr21:27229952-27230208 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 46 |
Conread position: | 2-268 |
Cow position: | chr21:725049-725308 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 46 |
Conread position: | 2-268 |
Cow position: | chr21:7716948-7717207 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 58 |
Conread position: | 2-270 |
Cow position: | chr21:6764859-6765122 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 2-270 |
Cow position: | chr21:13300995-13300725 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 2-271 |
Cow position: | chr21:22856057-22855799 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 10 |
Conread position: | 2-271 |
Cow position: | chr21:23192675-23192942 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 204 |
Conread position: | 2-271 |
Cow position: | chr21:33729277-33729012 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 200 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 19, 159 |
Conread position: | 2-271 |
Cow position: | chr21:34254439-34254702 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 188, 70 |
Conread position: | 2-271 |
Cow position: | chr21:48637903-48638166 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 195 |
Conread position: | 2-273 |
Cow position: | chr21:27341754-27342010 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 210 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 148, 58 |
Conread position: | 2-275 |
Cow position: | chr21:17416919-17417181 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 183 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 82, 116 |
Conread position: | 2-276 |
Cow position: | chr21:393864-393594 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 174 |
Conread position: | 2-276 |
Cow position: | chr21:1464071-1463804 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 197 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 186, 23 |
Conread position: | 2-276 |
Cow position: | chr21:2657431-2657167 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 58 |
Conread position: | 2-276 |
Cow position: | chr21:5649749-5649479 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 205 |
Conread position: | 2-276 |
Cow position: | chr21:6623985-6623721 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 207 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 46, 17 |
Conread position: | 2-276 |
Cow position: | chr21:13089636-13089900 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 8, 61 |
Conread position: | 2-276 |
Cow position: | chr21:18979003-18979283 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 208 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 47, 15 |
Conread position: | 2-276 |
Cow position: | chr21:23293313-23293582 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 62 |
Conread position: | 2-276 |
Cow position: | chr21:33419872-33420144 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 178 |
Conread position: | 2-276 |
Cow position: | chr21:34658877-34658610 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 204 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 188, 118 |
Conread position: | 3-254 |
Cow position: | chr21:21170100-21170352 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 190 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 187, 174 |
Conread position: | 3-268 |
Cow position: | chr21:15742249-15742523 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 198 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 38, 216 |
Conread position: | 3-268 |
Cow position: | chr21:23683392-23683122 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 212 |
Conread position: | 3-269 |
Cow position: | chr21:2847188-2847458 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 189 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 48, 212 |
Conread position: | 3-270 |
Cow position: | chr21:2420346-2420083 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 26 |
Conread position: | 3-276 |
Cow position: | chr21:38900615-38900356 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 96 |
Conread position: | 4-229 |
Cow position: | chr21:46463030-46462805 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 171 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 186, 76 |
Conread position: | 4-271 |
Cow position: | chr21:2904619-2904886 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 206 |
Conread position: | 4-271 |
Cow position: | chr21:36712038-36711770 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 207 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 54, 15 |
Conread position: | 4-276 |
Cow position: | chr21:14727888-14727628 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 15 |
Conread position: | 5-265 |
Cow position: | chr21:19958066-19957814 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 231, 49 |
Conread position: | 5-270 |
Cow position: | chr21:22857017-22856758 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 80 |
Conread position: | 5-271 |
Cow position: | chr21:17482599-17482336 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 188 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 186, 202 |
Conread position: | 6-314 |
Cow position: | chr21:20549070-20549387 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 226 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 28, 145 |
Conread position: | 9-270 |
Cow position: | chr21:3920375-3920634 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 192 |
Conread position: | 9-270 |
Cow position: | chr21:19350696-19350953 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 199 |
Conread position: | 9-271 |
Cow position: | chr21:2515009-2514751 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 195 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 182, 10 |
Conread position: | 9-271 |
Cow position: | chr21:7038027-7038286 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr21:19614409-19614151 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 194 |
Conread position: | 9-271 |
Cow position: | chr21:34910027-34909769 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 166 |
Conread position: | 9-271 |
Cow position: | chr21:36657409-36657146 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 151, 41 |
Conread position: | 11-270 |
Cow position: | chr21:12153967-12153713 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 201 |
Conread position: | 11-271 |
Cow position: | chr21:11676419-11676688 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 181 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 45, 191 |
Conread position: | 11-276 |
Cow position: | chr21:10263877-10263613 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 188 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 39, 83 |
Conread position: | 12-271 |
Cow position: | chr21:15584570-15584823 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 201 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 140, 55 |
Conread position: | 12-276 |
Cow position: | chr21:8125961-8126213 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 15, 56 |
Conread position: | 14-270 |
Cow position: | chr21:17208320-17208074 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 193 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 175, 48 |
Conread position: | 17-276 |
Cow position: | chr21:471463-471195 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 25, 202 |
Conread position: | 24-271 |
Cow position: | chr21:22464611-22464366 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 184 |
Conread position: | 25-286 |
Cow position: | chr21:3496357-3496611 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 183 |
Conread position: | 29-276 |
Cow position: | chr21:9218742-9218506 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 51, 13 |
Conread position: | 30-270 |
Cow position: | chr21:44074260-44074039 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 156, 79 |
Conread position: | 30-276 |
Cow position: | chr21:446872-446629 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 135, 30 |
Conread position: | 38-265 |
Cow position: | chr21:21000243-21000472 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 169 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 131, 169 |
Conread position: | 38-271 |
Cow position: | chr21:1752527-1752297 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 181 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 152, 166 |
Conread position: | 38-276 |
Cow position: | chr21:2927426-2927660 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 56, 170 |
Conread position: | 38-276 |
Cow position: | chr21:25473308-25473074 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 181 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 152, 47 |
Conread position: | 40-271 |
Cow position: | chr21:24418172-24418405 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 172 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 8, 173 |
Conread position: | 42-270 |
Cow position: | chr21:32113-31889 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 176 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 148, 134 |
Conread position: | 42-276 |
Cow position: | chr21:3765637-3765865 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 148, 116 |
Conread position: | 42-276 |
Cow position: | chr21:4276807-4277030 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 17, 10 |
Conread position: | 43-271 |
Cow position: | chr21:12801978-12802206 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 182 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 25, 136 |
Conread position: | 49-270 |
Cow position: | chr21:29855470-29855252 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 87, 94 |
Conread position: | 49-276 |
Cow position: | chr21:2260876-2261109 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 179 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 38, 167 |
Conread position: | 50-276 |
Cow position: | chr21:6051275-6051049 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 125, 10 |
Conread position: | 51-269 |
Cow position: | chr21:6619250-6619467 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 149 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 116, 17 |
Conread position: | 51-319 |
Cow position: | chr21:25291801-25291533 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 185 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 121, 72 |
Conread position: | 68-283 |
Cow position: | chr21:18846051-18846258 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 158 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 123, 23 |
Conread position: | 74-276 |
Cow position: | chr21:2293091-2293291 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 116, 64 |
Conread position: | 89-276 |
Cow position: | chr21:21907823-21908007 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 101, 118 |
Conread position: | 117-276 |
Cow position: | chr21:29955520-29955676 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 73, 90 |
Show alignments to all cow chromosomes.