Cow genome map
| Conread name: | Fet1-UMC-pd20fet-017-h10 |
| Conread position: | 2-265 |
| Cow position: | chr23:1321413-1321666 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 59 |
| Conread position: | 2-265 |
| Cow position: | chr23:39806653-39806386 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 2-267 |
| Cow position: | chr23:26986493-26986761 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 212 |
| Conread position: | 2-270 |
| Cow position: | chr23:1605004-1604743 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 28 |
| Conread position: | 2-271 |
| Cow position: | chr23:6592913-6593201 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 2-271 |
| Cow position: | chr23:10844104-10843843 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 188, 58 |
| Conread position: | 2-271 |
| Cow position: | chr23:11845069-11844818 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 2-271 |
| Cow position: | chr23:26741669-26741936 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 205 |
| Conread position: | 2-276 |
| Cow position: | chr23:344397-344665 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 60 |
| Conread position: | 2-276 |
| Cow position: | chr23:10852833-10852565 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 58 |
| Conread position: | 2-276 |
| Cow position: | chr23:15710297-15710569 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 2-276 |
| Cow position: | chr23:18367476-18367201 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 2-276 |
| Cow position: | chr23:26231103-26230836 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 189, 66 |
| Conread position: | 2-293 |
| Cow position: | chr23:13511514-13511230 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 61 |
| Conread position: | 2-317 |
| Cow position: | chr23:7374655-7374352 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 3-217 |
| Cow position: | chr23:38581083-38580871 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 187, 168 |
| Conread position: | 3-262 |
| Cow position: | chr23:9874451-9874210 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 3-270 |
| Cow position: | chr23:1009622-1009882 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 187, 19 |
| Conread position: | 4-271 |
| Cow position: | chr23:9712892-9712628 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 203 |
| Conread position: | 4-276 |
| Cow position: | chr23:20980624-20980356 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 5-270 |
| Cow position: | chr23:29447263-29447532 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 6-271 |
| Cow position: | chr23:1719296-1719031 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 174 |
| Conread position: | 6-276 |
| Cow position: | chr23:20605504-20605795 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 7-270 |
| Cow position: | chr23:7324529-7324267 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 50 |
| Conread position: | 7-277 |
| Cow position: | chr23:4855859-4856127 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 9-269 |
| Cow position: | chr23:4273955-4273699 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 194 |
| Conread position: | 9-271 |
| Cow position: | chr23:20455847-20456105 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 198 |
| Conread position: | 9-271 |
| Cow position: | chr23:28085140-28084882 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 193 |
| Conread position: | 9-276 |
| Cow position: | chr23:19056379-19056639 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 147 |
| Conread position: | 9-290 |
| Cow position: | chr23:5458725-5458451 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 198 |
| Conread position: | 9-317 |
| Cow position: | chr23:953815-954117 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 195 |
| Conread position: | 10-270 |
| Cow position: | chr23:16246516-16246260 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 9 |
| Conread position: | 10-276 |
| Cow position: | chr23:7311645-7311383 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 197 |
| Conread position: | 10-276 |
| Cow position: | chr23:33599605-33599870 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 200 |
| Conread position: | 12-271 |
| Cow position: | chr23:3168014-3167758 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 160 |
| Conread position: | 13-261 |
| Cow position: | chr23:30889417-30889172 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 177, 159 |
| Conread position: | 16-276 |
| Cow position: | chr23:27900124-27899863 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 126, 197 |
| Conread position: | 18-276 |
| Cow position: | chr23:25864917-25865177 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 154, 42 |
| Conread position: | 35-271 |
| Cow position: | chr23:25675926-25676147 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 156, 25 |
| Conread position: | 36-270 |
| Cow position: | chr23:35941973-35941744 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 74 |
| Conread position: | 38-268 |
| Cow position: | chr23:2470344-2470115 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 38-276 |
| Cow position: | chr23:11209738-11209506 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 39-276 |
| Cow position: | chr23:26941726-26941491 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 83, 172 |
| Conread position: | 40-271 |
| Cow position: | chr23:26306116-26305892 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 16 |
| Conread position: | 42-265 |
| Cow position: | chr23:13359325-13359105 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 45 |
| Conread position: | 42-271 |
| Cow position: | chr23:8291411-8291176 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 42-276 |
| Cow position: | chr23:3282644-3282875 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 100 |
| Conread position: | 42-279 |
| Cow position: | chr23:21630958-21630717 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 172 |
| Conread position: | 44-270 |
| Cow position: | chr23:3140577-3140348 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 127, 59 |
| Conread position: | 49-245 |
| Cow position: | chr23:36198979-36198788 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 50-265 |
| Cow position: | chr23:1428533-1428324 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 50-265 |
| Cow position: | chr23:24562154-24562366 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 54-276 |
| Cow position: | chr23:29033964-29033751 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 122, 53 |
| Conread position: | 62-276 |
| Cow position: | chr23:33940412-33940624 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 63-205 |
| Cow position: | chr23:32114344-32114204 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 63-268 |
| Cow position: | chr23:20057394-20057594 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 63-276 |
| Cow position: | chr23:31602026-31602239 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 66-276 |
| Cow position: | chr23:9599248-9599040 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 7, 142 |
| Conread position: | 92-276 |
| Cow position: | chr23:32937312-32937492 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 92-276 |
| Cow position: | chr23:32939973-32940156 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 98-271 |
| Cow position: | chr23:6173124-6173293 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 92, 109 |
| Conread position: | 135-276 |
| Cow position: | chr23:36715763-36715898 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 29 |
Show alignments to all cow chromosomes.