Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 2-271 |
Cow position: | chr25:3992567-3992301 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 206 |
Conread position: | 2-271 |
Cow position: | chr25:14791529-14791269 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 37 |
Conread position: | 2-276 |
Cow position: | chr25:9349480-9349758 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 213 |
Conread position: | 2-276 |
Cow position: | chr25:22549837-22550086 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 203 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 188, 67 |
Conread position: | 2-276 |
Cow position: | chr25:26238648-26238379 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 147 |
Conread position: | 3-270 |
Cow position: | chr25:29336267-29335998 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 195 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 3-271 |
Cow position: | chr25:14617966-14618239 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 66, 211 |
Conread position: | 3-274 |
Cow position: | chr25:21562175-21562446 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 146, 85 |
Conread position: | 3-276 |
Cow position: | chr25:10012273-10012548 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 201 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 34, 90 |
Conread position: | 4-270 |
Cow position: | chr25:17553488-17553752 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 198 |
Conread position: | 4-271 |
Cow position: | chr25:9625583-9625327 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 198 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 15, 96 |
Conread position: | 4-271 |
Cow position: | chr25:32606739-32607007 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 51, 15 |
Conread position: | 4-276 |
Cow position: | chr25:24227561-24227839 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 198 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 37, 213 |
Conread position: | 7-271 |
Cow position: | chr25:19924295-19924036 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 183 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 218, 92 |
Conread position: | 7-276 |
Cow position: | chr25:36392192-36392458 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 103 |
Conread position: | 9-216 |
Cow position: | chr25:11294564-11294355 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 164 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 38, 10 |
Conread position: | 9-265 |
Cow position: | chr25:41363376-41363621 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 173 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 9-270 |
Cow position: | chr25:11054694-11054442 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 18 |
Conread position: | 9-270 |
Cow position: | chr25:25510662-25510407 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 51 |
Conread position: | 9-271 |
Cow position: | chr25:15412796-15412537 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr25:17993748-17994006 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 193 |
Conread position: | 9-276 |
Cow position: | chr25:6894264-6894001 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 186 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 40, 78 |
Conread position: | 10-265 |
Cow position: | chr25:22314970-22314718 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 197 |
Conread position: | 12-204 |
Cow position: | chr25:14720252-14720060 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 153 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 27, 88 |
Conread position: | 12-268 |
Cow position: | chr25:15006979-15006734 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 179 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 161, 8 |
Conread position: | 25-276 |
Cow position: | chr25:40906522-40906770 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 182 |
Conread position: | 30-265 |
Cow position: | chr25:2136108-2135882 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 185 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 160, 48 |
Conread position: | 33-276 |
Cow position: | chr25:21904188-21903944 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 172 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 72, 6 |
Conread position: | 38-270 |
Cow position: | chr25:35612592-35612821 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 152, 169 |
Conread position: | 38-276 |
Cow position: | chr25:12081612-12081846 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 168 |
Conread position: | 38-276 |
Cow position: | chr25:14833928-14834155 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 152, 48 |
Conread position: | 40-276 |
Cow position: | chr25:27535199-27535433 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 124, 30 |
Conread position: | 42-270 |
Cow position: | chr25:18310508-18310287 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 169 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 42-271 |
Cow position: | chr25:13940995-13941226 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 118, 165 |
Conread position: | 42-276 |
Cow position: | chr25:33978671-33978900 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 148, 165 |
Conread position: | 43-204 |
Cow position: | chr25:15254860-15255017 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 129 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 115, 21 |
Conread position: | 43-276 |
Cow position: | chr25:16002020-16002247 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 168 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 133, 62 |
Conread position: | 45-270 |
Cow position: | chr25:17562804-17562582 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 7, 48 |
Conread position: | 46-266 |
Cow position: | chr25:18161044-18160827 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 115, 59 |
Conread position: | 52-254 |
Cow position: | chr25:12824302-12824501 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 178, 154 |
Conread position: | 63-270 |
Cow position: | chr25:11666383-11666180 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 127, 79 |
Conread position: | 63-276 |
Cow position: | chr25:26228309-26228102 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 127, 108 |
Conread position: | 65-270 |
Cow position: | chr25:13962523-13962322 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 157 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 125, 142 |
Conread position: | 80-265 |
Cow position: | chr25:5824167-5823986 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 145 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 110, 127 |
Conread position: | 133-279 |
Cow position: | chr25:2516945-2516803 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 57, 74 |
Show alignments to all cow chromosomes.