Cow genome map

Conread name: Fet1-UMC-pd20fet-017-h10

Conread position: 2-271
Cow position: chr25:3992567-3992301 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 206

Conread position: 2-271
Cow position: chr25:14791529-14791269 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 37

Conread position: 2-276
Cow position: chr25:9349480-9349758 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 213

Conread position: 2-276
Cow position: chr25:22549837-22550086 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 188, 67

Conread position: 2-276
Cow position: chr25:26238648-26238379 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 3-270
Cow position: chr25:29336267-29335998 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 16

Conread position: 3-271
Cow position: chr25:14617966-14618239 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 211

Conread position: 3-274
Cow position: chr25:21562175-21562446 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 146, 85

Conread position: 3-276
Cow position: chr25:10012273-10012548 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 90

Conread position: 4-270
Cow position: chr25:17553488-17553752 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 198

Conread position: 4-271
Cow position: chr25:9625583-9625327 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 96

Conread position: 4-271
Cow position: chr25:32606739-32607007 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 15

Conread position: 4-276
Cow position: chr25:24227561-24227839 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 213

Conread position: 7-271
Cow position: chr25:19924295-19924036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 218, 92

Conread position: 7-276
Cow position: chr25:36392192-36392458 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 103

Conread position: 9-216
Cow position: chr25:11294564-11294355 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 10

Conread position: 9-265
Cow position: chr25:41363376-41363621 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 9-270
Cow position: chr25:11054694-11054442 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 18

Conread position: 9-270
Cow position: chr25:25510662-25510407 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 51

Conread position: 9-271
Cow position: chr25:15412796-15412537 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 198

Conread position: 9-271
Cow position: chr25:17993748-17994006 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 193

Conread position: 9-276
Cow position: chr25:6894264-6894001 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 78

Conread position: 10-265
Cow position: chr25:22314970-22314718 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 197

Conread position: 12-204
Cow position: chr25:14720252-14720060 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 88

Conread position: 12-268
Cow position: chr25:15006979-15006734 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 161, 8

Conread position: 25-276
Cow position: chr25:40906522-40906770 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 182

Conread position: 30-265
Cow position: chr25:2136108-2135882 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 160, 48

Conread position: 33-276
Cow position: chr25:21904188-21903944 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 6

Conread position: 38-270
Cow position: chr25:35612592-35612821 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 152, 169

Conread position: 38-276
Cow position: chr25:12081612-12081846 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 168

Conread position: 38-276
Cow position: chr25:14833928-14834155 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 152, 48

Conread position: 40-276
Cow position: chr25:27535199-27535433 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 30

Conread position: 42-270
Cow position: chr25:18310508-18310287 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 42-271
Cow position: chr25:13940995-13941226 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 118, 165

Conread position: 42-276
Cow position: chr25:33978671-33978900 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 148, 165

Conread position: 43-204
Cow position: chr25:15254860-15255017 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 21

Conread position: 43-276
Cow position: chr25:16002020-16002247 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 133, 62

Conread position: 45-270
Cow position: chr25:17562804-17562582 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 48

Conread position: 46-266
Cow position: chr25:18161044-18160827 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 59

Conread position: 52-254
Cow position: chr25:12824302-12824501 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 154

Conread position: 63-270
Cow position: chr25:11666383-11666180 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 127, 79

Conread position: 63-276
Cow position: chr25:26228309-26228102 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 108

Conread position: 65-270
Cow position: chr25:13962523-13962322 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 125, 142

Conread position: 80-265
Cow position: chr25:5824167-5823986 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 127

Conread position: 133-279
Cow position: chr25:2516945-2516803 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 74

Show alignments to all cow chromosomes.