Cow genome map

Conread name: Fet1-UMC-pd20fet-017-h10

Conread position: 1-270
Cow position: chr4:8890151-8890417 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 7, 22

Conread position: 1-276
Cow position: chr4:17585245-17585524 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 73

Conread position: 1-317
Cow position: chr4:22236703-22237011 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 19

Conread position: 2-204
Cow position: chr4:16799421-16799618 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 0

Conread position: 2-268
Cow position: chr4:19584476-19584206 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 2-269
Cow position: chr4:36893125-36892863 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 58

Conread position: 2-271
Cow position: chr4:12464618-12464354 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 108

Conread position: 2-271
Cow position: chr4:18099205-18099463 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 17

Conread position: 2-271
Cow position: chr4:19541898-19541629 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 74

Conread position: 2-271
Cow position: chr4:30574228-30573962 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 205

Conread position: 2-271
Cow position: chr4:37620116-37620387 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 28

Conread position: 2-276
Cow position: chr4:7249797-7250066 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 188

Conread position: 2-276
Cow position: chr4:22101495-22101763 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 76

Conread position: 2-276
Cow position: chr4:23853976-23853700 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 82

Conread position: 2-276
Cow position: chr4:24002197-24002468 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 205

Conread position: 2-276
Cow position: chr4:25369888-25369614 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 168, 58

Conread position: 2-276
Cow position: chr4:37704037-37703767 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 17

Conread position: 2-276
Cow position: chr4:54494609-54494341 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 170, 17

Conread position: 3-261
Cow position: chr4:54184717-54184979 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 157, 45

Conread position: 3-265
Cow position: chr4:22366898-22366642 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 187, 58

Conread position: 3-270
Cow position: chr4:38067654-38067397 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 90

Conread position: 3-270
Cow position: chr4:46526771-46526507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 105

Conread position: 3-271
Cow position: chr4:14470797-14471062 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 205

Conread position: 3-271
Cow position: chr4:19097062-19096803 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 16

Conread position: 3-271
Cow position: chr4:22073539-22073796 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 16

Conread position: 3-276
Cow position: chr4:5777259-5777543 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 42, 248

Conread position: 3-276
Cow position: chr4:43381949-43381674 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 109, 17

Conread position: 3-276
Cow position: chr4:51783952-51783676 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 180

Conread position: 4-270
Cow position: chr4:37553274-37553537 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 203

Conread position: 4-271
Cow position: chr4:18255633-18255370 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 15

Conread position: 4-276
Cow position: chr4:26009216-26008947 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 203

Conread position: 5-270
Cow position: chr4:14229856-14230119 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 198

Conread position: 5-271
Cow position: chr4:56177587-56177315 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 211

Conread position: 6-271
Cow position: chr4:18974205-18973948 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 54

Conread position: 6-271
Cow position: chr4:53125907-53125637 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 210

Conread position: 6-276
Cow position: chr4:1355747-1356008 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 93

Conread position: 6-276
Cow position: chr4:4319378-4319640 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 237, 19

Conread position: 7-270
Cow position: chr4:21553416-21553674 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 12

Conread position: 9-268
Cow position: chr4:6034327-6034581 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 10

Conread position: 9-270
Cow position: chr4:9520060-9519806 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 10

Conread position: 9-270
Cow position: chr4:10037175-10036921 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 217, 96

Conread position: 9-270
Cow position: chr4:44734340-44734081 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 181, 198

Conread position: 9-271
Cow position: chr4:6546967-6547225 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 198

Conread position: 9-271
Cow position: chr4:17752532-17752273 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 198

Conread position: 9-271
Cow position: chr4:21044441-21044700 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 198

Conread position: 9-271
Cow position: chr4:44449824-44450080 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 51

Conread position: 9-271
Cow position: chr4:48733396-48733140 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 181, 28

Conread position: 9-271
Cow position: chr4:64072589-64072848 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 162, 10

Conread position: 9-276
Cow position: chr4:23655759-23655496 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 167

Conread position: 9-276
Cow position: chr4:34166206-34166466 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 174, 39

Conread position: 9-290
Cow position: chr4:534005-533736 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 181, 64

Conread position: 9-319
Cow position: chr4:10613481-10613790 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 162, 108

Conread position: 10-267
Cow position: chr4:55955091-55954834 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 145, 195

Conread position: 11-271
Cow position: chr4:44051992-44051739 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 144

Conread position: 12-261
Cow position: chr4:63251162-63251408 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 158, 104

Conread position: 12-268
Cow position: chr4:24119148-24119406 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 196

Conread position: 12-271
Cow position: chr4:13877956-13877699 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 160, 30

Conread position: 14-271
Cow position: chr4:10016829-10017073 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 157, 33

Conread position: 22-276
Cow position: chr4:30004303-30004552 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 44

Conread position: 22-276
Cow position: chr4:34577329-34577076 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 143, 18

Conread position: 23-271
Cow position: chr4:50979000-50978753 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 30

Conread position: 25-203
Cow position: chr4:55395230-55395054 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 28-270
Cow position: chr4:49745374-49745136 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 178, 0

Conread position: 30-276
Cow position: chr4:28836276-28836032 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 118

Conread position: 30-276
Cow position: chr4:37691684-37691921 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 160, 38

Conread position: 30-318
Cow position: chr4:8674430-8674146 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 134, 102

Conread position: 32-276
Cow position: chr4:6653482-6653248 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 160, 85

Conread position: 35-276
Cow position: chr4:18812542-18812778 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 192, 29

Conread position: 37-290
Cow position: chr4:61066364-61066115 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 170, 43

Conread position: 38-271
Cow position: chr4:1404773-1404546 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 153, 39

Conread position: 38-271
Cow position: chr4:3340647-3340431 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 206, 38

Conread position: 38-271
Cow position: chr4:33564610-33564379 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 128

Conread position: 38-276
Cow position: chr4:4127365-4127138 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 23

Conread position: 38-276
Cow position: chr4:21741707-21741474 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 79

Conread position: 38-276
Cow position: chr4:27287410-27287652 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 40-271
Cow position: chr4:40823796-40824018 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 191, 129

Conread position: 40-271
Cow position: chr4:47730604-47730378 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 24

Conread position: 42-270
Cow position: chr4:12752510-12752286 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 100

Conread position: 42-276
Cow position: chr4:29805648-29805884 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 130, 171

Conread position: 46-276
Cow position: chr4:54930945-54931169 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 61

Conread position: 47-276
Cow position: chr4:46549816-46549589 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 55

Conread position: 48-276
Cow position: chr4:12560750-12560522 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 57

Conread position: 48-276
Cow position: chr4:55523028-55522803 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 142, 159

Conread position: 48-277
Cow position: chr4:48499558-48499325 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 167

Conread position: 51-249
Cow position: chr4:51002875-51002681 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 179, 152

Conread position: 51-271
Cow position: chr4:67408216-67407999 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 157

Conread position: 60-265
Cow position: chr4:17474136-17473935 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 147

Conread position: 64-264
Cow position: chr4:48118963-48119164 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 79

Conread position: 64-271
Cow position: chr4:54974644-54974443 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 126, 81

Conread position: 64-293
Cow position: chr4:49741192-49740967 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 17

Conread position: 65-270
Cow position: chr4:25226639-25226438 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 72-276
Cow position: chr4:27185870-27186077 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 141

Conread position: 74-271
Cow position: chr4:1926977-1927171 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 116, 133

Conread position: 76-276
Cow position: chr4:39458324-39458128 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 114, 127

Conread position: 78-276
Cow position: chr4:23847513-23847701 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 131

Conread position: 79-276
Cow position: chr4:61650902-61651093 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 44

Conread position: 80-276
Cow position: chr4:8068534-8068335 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 133

Conread position: 89-271
Cow position: chr4:18106236-18106416 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 74

Conread position: 92-276
Cow position: chr4:61235294-61235482 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 19

Conread position: 101-266
Cow position: chr4:4736640-4736472 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 112

Conread position: 144-276
Cow position: chr4:65891646-65891517 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 63

Show alignments to all cow chromosomes.