Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 1-268 |
Cow position: | chr5:58855909-58855647 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 199 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 52, 18 |
Conread position: | 1-276 |
Cow position: | chr5:26467426-26467156 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 48 |
Conread position: | 2-249 |
Cow position: | chr5:49558964-49558723 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 58 |
Conread position: | 2-264 |
Cow position: | chr5:49820947-49820688 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 56, 67 |
Conread position: | 2-267 |
Cow position: | chr5:30816520-30816257 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 201 |
Conread position: | 2-268 |
Cow position: | chr5:32394405-32394154 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 17, 26 |
Conread position: | 2-271 |
Cow position: | chr5:6045092-6044825 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 206 |
Conread position: | 2-271 |
Cow position: | chr5:17384296-17384561 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 197 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 72, 89 |
Conread position: | 2-271 |
Cow position: | chr5:18573975-18573709 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 205 |
Conread position: | 2-271 |
Cow position: | chr5:19969227-19969493 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 205 |
Conread position: | 2-271 |
Cow position: | chr5:26097100-26096835 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 15 |
Conread position: | 2-271 |
Cow position: | chr5:41981206-41980941 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 142 |
Conread position: | 2-271 |
Cow position: | chr5:42673896-42673633 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 58 |
Conread position: | 2-271 |
Cow position: | chr5:64524075-64524342 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 60 |
Conread position: | 2-272 |
Cow position: | chr5:35826395-35826138 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 58 |
Conread position: | 2-276 |
Cow position: | chr5:1105066-1105326 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 209 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 188, 39 |
Conread position: | 2-276 |
Cow position: | chr5:12316119-12315855 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 58 |
Conread position: | 2-276 |
Cow position: | chr5:16893971-16894235 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 205 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 188, 45 |
Conread position: | 2-276 |
Cow position: | chr5:29827858-29827587 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 205 |
Conread position: | 2-276 |
Cow position: | chr5:31469778-31470040 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 203 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 188, 94 |
Conread position: | 2-276 |
Cow position: | chr5:66366335-66366068 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 17 |
Conread position: | 2-278 |
Cow position: | chr5:35145157-35144875 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 214 |
Conread position: | 2-283 |
Cow position: | chr5:16508900-16508613 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 17 |
Conread position: | 3-263 |
Cow position: | chr5:51292924-51293190 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 197 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 41, 8 |
Conread position: | 3-269 |
Cow position: | chr5:70402883-70402616 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 188 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 159, 24 |
Conread position: | 3-270 |
Cow position: | chr5:46708985-46708723 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 115 |
Conread position: | 3-270 |
Cow position: | chr5:51151559-51151821 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 3-270 |
Cow position: | chr5:52289577-52289321 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 202 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 16, 89 |
Conread position: | 3-276 |
Cow position: | chr5:34638689-34638427 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 67 |
Conread position: | 3-276 |
Cow position: | chr5:56443080-56442816 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 39 |
Conread position: | 3-276 |
Cow position: | chr5:60448049-60447781 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 146 |
Conread position: | 3-285 |
Cow position: | chr5:49912854-49912572 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 203 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 158, 17 |
Conread position: | 4-270 |
Cow position: | chr5:31097002-31097262 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 0 |
Conread position: | 4-276 |
Cow position: | chr5:39333755-39334024 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 160 |
Conread position: | 4-276 |
Cow position: | chr5:59303466-59303748 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 198 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 168, 15 |
Conread position: | 4-276 |
Cow position: | chr5:74643859-74644126 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 16 |
Conread position: | 6-276 |
Cow position: | chr5:59082392-59082658 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 185, 17 |
Conread position: | 8-273 |
Cow position: | chr5:41547208-41547468 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 198 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 182, 61 |
Conread position: | 9-260 |
Cow position: | chr5:26561950-26561695 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 196 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 33, 175 |
Conread position: | 9-270 |
Cow position: | chr5:2427929-2428183 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-270 |
Cow position: | chr5:37736483-37736226 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 9-270 |
Cow position: | chr5:39363690-39363437 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 192 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 181, 35 |
Conread position: | 9-270 |
Cow position: | chr5:59147429-59147172 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 194 |
Conread position: | 9-271 |
Cow position: | chr5:1383800-1383537 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 197 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 126, 214 |
Conread position: | 9-271 |
Cow position: | chr5:6616365-6616106 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr5:12324751-12325011 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 195 |
Conread position: | 9-271 |
Cow position: | chr5:26074871-26075129 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 194 |
Conread position: | 9-271 |
Cow position: | chr5:37430693-37430952 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 195 |
Conread position: | 9-271 |
Cow position: | chr5:41067821-41067563 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 195 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 181, 191 |
Conread position: | 9-271 |
Cow position: | chr5:51747039-51746782 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 129 |
Conread position: | 9-271 |
Cow position: | chr5:58202355-58202097 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 200 |
Conread position: | 9-276 |
Cow position: | chr5:72045843-72046110 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 200 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 82, 160 |
Conread position: | 9-285 |
Cow position: | chr5:6454841-6455110 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 194 |
Conread position: | 9-315 |
Cow position: | chr5:51858485-51858789 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 220 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 151, 15 |
Conread position: | 12-265 |
Cow position: | chr5:14832813-14833065 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 159, 29 |
Conread position: | 12-271 |
Cow position: | chr5:10260608-10260861 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 34 |
Conread position: | 12-279 |
Cow position: | chr5:55756647-55756908 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 202 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 165, 55 |
Conread position: | 13-271 |
Cow position: | chr5:24485620-24485875 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 21 |
Conread position: | 13-272 |
Cow position: | chr5:34463791-34464046 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 200 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 25, 114 |
Conread position: | 15-276 |
Cow position: | chr5:56821045-56820796 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 45 |
Conread position: | 22-271 |
Cow position: | chr5:6130141-6129895 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 176 |
Conread position: | 26-271 |
Cow position: | chr5:5337422-5337664 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 179 |
Conread position: | 27-276 |
Cow position: | chr5:12323017-12323261 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 163, 33 |
Conread position: | 30-229 |
Cow position: | chr5:24102505-24102305 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 176, 0 |
Conread position: | 30-271 |
Cow position: | chr5:23641210-23641457 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 178 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 71, 22 |
Conread position: | 38-271 |
Cow position: | chr5:6032764-6032534 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 169 |
Conread position: | 38-271 |
Cow position: | chr5:34300660-34300432 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 184 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 138, 126 |
Conread position: | 38-276 |
Cow position: | chr5:32815650-32815410 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 172 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 122, 61 |
Conread position: | 38-276 |
Cow position: | chr5:47719281-47719043 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 178 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 133, 35 |
Conread position: | 42-263 |
Cow position: | chr5:38431827-38431611 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 177 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 37, 18 |
Conread position: | 42-276 |
Cow position: | chr5:31661403-31661631 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 130, 18 |
Conread position: | 42-276 |
Cow position: | chr5:37377629-37377403 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 148, 8 |
Conread position: | 42-287 |
Cow position: | chr5:59509092-59508845 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 177 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 118, 48 |
Conread position: | 43-265 |
Cow position: | chr5:72007112-72007331 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 148, 161 |
Conread position: | 44-276 |
Cow position: | chr5:7041955-7042182 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 147, 163 |
Conread position: | 44-276 |
Cow position: | chr5:34115411-34115176 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 127, 169 |
Conread position: | 48-276 |
Cow position: | chr5:42727033-42727257 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 179 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 142, 84 |
Conread position: | 51-276 |
Cow position: | chr5:53835447-53835229 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 180 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 139, 9 |
Conread position: | 51-276 |
Cow position: | chr5:55195212-55194988 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 62, 158 |
Conread position: | 54-276 |
Cow position: | chr5:43004532-43004308 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 157 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 106, 163 |
Conread position: | 62-271 |
Cow position: | chr5:11834408-11834616 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 158 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 11, 143 |
Conread position: | 63-276 |
Cow position: | chr5:64758992-64759197 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 118, 85 |
Conread position: | 67-268 |
Cow position: | chr5:61361401-61361604 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 94, 146 |
Conread position: | 67-291 |
Cow position: | chr5:34232469-34232244 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 126, 104 |
Conread position: | 85-271 |
Cow position: | chr5:53776204-53776021 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 147 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 105, 117 |
Conread position: | 88-317 |
Cow position: | chr5:31217828-31217609 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 163 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 137, 50 |
Conread position: | 89-271 |
Cow position: | chr5:1766576-1766756 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 144 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 101, 120 |
Conread position: | 130-268 |
Cow position: | chr5:75745421-75745288 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 77 |
Show alignments to all cow chromosomes.