Cow genome map
Conread name: | Fet1-UMC-pd20fet-017-h10 |
Conread position: | 1-276 |
Cow position: | chr9:6952339-6952605 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 96 |
Conread position: | 2-204 |
Cow position: | chr9:54528765-54528967 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-234 |
Cow position: | chr9:10308757-10308533 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 183 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 185, 86 |
Conread position: | 2-271 |
Cow position: | chr9:13186476-13186211 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 23 |
Conread position: | 2-271 |
Cow position: | chr9:28773367-28773634 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 205 |
Conread position: | 2-271 |
Cow position: | chr9:38184228-38183962 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 205 |
Conread position: | 2-271 |
Cow position: | chr9:44467099-44466837 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 203 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 187, 155 |
Conread position: | 2-271 |
Cow position: | chr9:46316538-46316273 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 201 |
Conread position: | 2-271 |
Cow position: | chr9:59507318-59507587 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 208 |
Conread position: | 2-276 |
Cow position: | chr9:7410032-7410300 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 125 |
Conread position: | 2-276 |
Cow position: | chr9:11299447-11299170 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 88 |
Conread position: | 2-276 |
Cow position: | chr9:15982829-15982561 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 60 |
Conread position: | 2-276 |
Cow position: | chr9:16218393-16218127 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 58 |
Conread position: | 2-276 |
Cow position: | chr9:16300321-16300049 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 206 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 17, 177 |
Conread position: | 2-276 |
Cow position: | chr9:18381109-18381378 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 192 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 17, 182 |
Conread position: | 2-276 |
Cow position: | chr9:19539347-19539616 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-276 |
Cow position: | chr9:20393878-20393609 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 145 |
Conread position: | 2-276 |
Cow position: | chr9:24726428-24726158 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-276 |
Cow position: | chr9:29338783-29338515 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 59 |
Conread position: | 2-276 |
Cow position: | chr9:37017134-37017405 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 205 |
Conread position: | 2-276 |
Cow position: | chr9:37510267-37510533 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 130 |
Conread position: | 2-276 |
Cow position: | chr9:52407420-52407683 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 78 |
Conread position: | 3-271 |
Cow position: | chr9:2858792-2859055 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 183 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 196, 19 |
Conread position: | 3-271 |
Cow position: | chr9:27085708-27085985 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 212 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 41, 212 |
Conread position: | 3-276 |
Cow position: | chr9:48374263-48374537 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 200 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 40, 14 |
Conread position: | 3-282 |
Cow position: | chr9:26065168-26064900 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 204 |
Conread position: | 4-270 |
Cow position: | chr9:30162449-30162711 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 64 |
Conread position: | 4-270 |
Cow position: | chr9:30722195-30722441 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 186, 37 |
Conread position: | 4-270 |
Cow position: | chr9:32238634-32238898 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 201 |
Conread position: | 4-276 |
Cow position: | chr9:10634766-10634509 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 68 |
Conread position: | 4-276 |
Cow position: | chr9:26115598-26115331 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 101 |
Conread position: | 4-276 |
Cow position: | chr9:44500591-44500323 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 173 |
Conread position: | 4-391 |
Cow position: | chr9:28747270-28746896 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 56 |
Conread position: | 5-270 |
Cow position: | chr9:1463951-1464212 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 153 |
Conread position: | 6-271 |
Cow position: | chr9:19743230-19743495 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 204 |
Conread position: | 6-276 |
Cow position: | chr9:4928883-4929141 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 49 |
Conread position: | 6-276 |
Cow position: | chr9:27892379-27892106 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 197 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 145, 203 |
Conread position: | 7-270 |
Cow position: | chr9:59478954-59479225 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 199 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 37, 211 |
Conread position: | 7-271 |
Cow position: | chr9:17879823-17879563 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 151 |
Conread position: | 8-270 |
Cow position: | chr9:38753932-38753661 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 9-265 |
Cow position: | chr9:34000356-34000103 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 39, 49 |
Conread position: | 9-269 |
Cow position: | chr9:3387947-3388204 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 170 |
Conread position: | 9-270 |
Cow position: | chr9:6253454-6253197 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 195 |
Conread position: | 9-271 |
Cow position: | chr9:1296026-1296285 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 195 |
Conread position: | 9-271 |
Cow position: | chr9:3996880-3997141 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 197 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 37, 201 |
Conread position: | 9-271 |
Cow position: | chr9:4939603-4939862 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr9:10803560-10803304 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 116 |
Conread position: | 9-271 |
Cow position: | chr9:18478005-18478264 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 194 |
Conread position: | 9-271 |
Cow position: | chr9:25996751-25997013 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 209 |
Conread position: | 9-271 |
Cow position: | chr9:30187595-30187337 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 199 |
Conread position: | 9-271 |
Cow position: | chr9:34237865-34238123 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 197 |
Conread position: | 9-271 |
Cow position: | chr9:37108997-37108738 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 199 |
Conread position: | 9-271 |
Cow position: | chr9:43494939-43494680 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 9-271 |
Cow position: | chr9:44822049-44821789 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 194 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 40, 27 |
Conread position: | 9-276 |
Cow position: | chr9:43642763-43643022 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 180 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 95, 11 |
Conread position: | 9-276 |
Cow position: | chr9:44202201-44202453 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 47, 57 |
Conread position: | 9-278 |
Cow position: | chr9:33056075-33056347 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 200 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 52, 10 |
Conread position: | 9-317 |
Cow position: | chr9:9610996-9611299 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 198 |
Conread position: | 10-291 |
Cow position: | chr9:62442539-62442825 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 202 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 160, 209 |
Conread position: | 10-317 |
Cow position: | chr9:11841270-11841572 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 198 |
Conread position: | 11-271 |
Cow position: | chr9:18426987-18427248 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 222 |
Conread position: | 12-265 |
Cow position: | chr9:53109782-53110030 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 86 |
Conread position: | 12-271 |
Cow position: | chr9:3004453-3004713 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 202 |
Conread position: | 14-276 |
Cow position: | chr9:36507001-36506741 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 182 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 143, 6 |
Conread position: | 29-317 |
Cow position: | chr9:25238548-25238828 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 198 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 133, 21 |
Conread position: | 30-276 |
Cow position: | chr9:23541168-23540923 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 31-201 |
Cow position: | chr9:29191846-29192016 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 36-270 |
Cow position: | chr9:35203186-35203416 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 182 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 78, 16 |
Conread position: | 39-276 |
Cow position: | chr9:25546963-25547193 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 169 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 151, 21 |
Conread position: | 40-265 |
Cow position: | chr9:30138435-30138665 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 170 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 150, 20 |
Conread position: | 42-268 |
Cow position: | chr9:28656924-28657146 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 167 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 164, 0 |
Conread position: | 42-269 |
Cow position: | chr9:8338340-8338564 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 165 |
Conread position: | 42-270 |
Cow position: | chr9:34467371-34467157 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 43-265 |
Cow position: | chr9:2119737-2119524 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 164 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 22, 86 |
Conread position: | 43-271 |
Cow position: | chr9:1984215-1983990 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 164 |
Conread position: | 45-271 |
Cow position: | chr9:8289262-8289494 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 87, 188 |
Conread position: | 46-276 |
Cow position: | chr9:29330356-29330135 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 164 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 144, 62 |
Conread position: | 48-276 |
Cow position: | chr9:8234424-8234655 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 176 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 133, 80 |
Conread position: | 49-271 |
Cow position: | chr9:20900818-20900599 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 141, 158 |
Conread position: | 50-261 |
Cow position: | chr9:31062532-31062319 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 121, 162 |
Conread position: | 50-276 |
Cow position: | chr9:33078011-33077780 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 167 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 110, 20 |
Conread position: | 51-276 |
Cow position: | chr9:42628385-42628157 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 161 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 121, 162 |
Conread position: | 51-276 |
Cow position: | chr9:53531546-53531319 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 161 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 110, 41 |
Conread position: | 55-276 |
Cow position: | chr9:52633207-52632994 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 175, 116 |
Conread position: | 63-276 |
Cow position: | chr9:44914801-44914593 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 167 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 127, 71 |
Conread position: | 65-276 |
Cow position: | chr9:11313201-11312994 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 162 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 125, 142 |
Conread position: | 93-270 |
Cow position: | chr9:36483222-36483395 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 138, 113 |
Conread position: | 100-276 |
Cow position: | chr9:5327568-5327741 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 90, 107 |
Conread position: | 106-276 |
Cow position: | chr9:3730780-3730616 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 84, 45 |
Conread position: | 120-276 |
Cow position: | chr9:21840503-21840656 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 70, 88 |
Show alignments to all cow chromosomes.