Cow genome map

Conread name: Liv1-LVR010001E10

Conread position: 1-128
Cow position: chr11:24292647-24292773 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 61

Conread position: 1-139
Cow position: chr11:31928363-31928502 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 1-140
Cow position: chr11:28693780-28693640 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-142
Cow position: chr11:10092865-10093006 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 120
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 100, 66

Conread position: 1-162
Cow position: chr11:27659439-27659601 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 1-162
Cow position: chr11:40773839-40773676 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 1-176
Cow position: chr11:30121455-30121277 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-198
Cow position: chr11:72312647-72312845 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 171

Conread position: 1-413
Cow position: chr11:9431407-9431846 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 435

Conread position: 1-544
Cow position: chr11:7228444-7229037 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-690
Cow position: chr11:39805906-39806629 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 455

Conread position: 1-724
Cow position: chr11:76371864-76371091 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 45

Conread position: 1-762
Cow position: chr11:45107046-45107872 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 13

Conread position: 1-781
Cow position: chr11:60757772-60756942 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 1-796
Cow position: chr11:32478622-32477760 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-801
Cow position: chr11:62575749-62574928 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 1-810
Cow position: chr11:26549690-26550541 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 467

Conread position: 1-811
Cow position: chr11:4054107-4053285 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 1-811
Cow position: chr11:11591160-11592047 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 499

Conread position: 1-811
Cow position: chr11:11990179-11991064 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 245

Conread position: 1-811
Cow position: chr11:22934399-22933560 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 382

Conread position: 1-811
Cow position: chr11:30201499-30200632 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 294

Conread position: 1-811
Cow position: chr11:33000082-33000940 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 288

Conread position: 1-811
Cow position: chr11:35143128-35142265 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 49

Conread position: 1-811
Cow position: chr11:38575292-38574418 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 660

Conread position: 1-811
Cow position: chr11:38833282-38832412 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 656

Conread position: 1-811
Cow position: chr11:40403571-40402704 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 716

Conread position: 1-811
Cow position: chr11:47973661-47972785 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 498

Conread position: 1-811
Cow position: chr11:49237763-49236907 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 57

Conread position: 1-811
Cow position: chr11:60823998-60824840 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-811
Cow position: chr11:84966308-84967175 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 1-811
Cow position: chr11:85391633-85390795 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 487

Conread position: 2-811
Cow position: chr11:45652715-45651856 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 401

Conread position: 3-492
Cow position: chr11:27937601-27938124 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 232

Conread position: 7-811
Cow position: chr11:18147332-18146483 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 534

Conread position: 32-401
Cow position: chr11:77235874-77236286 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 167-629
Cow position: chr11:38068656-38069148 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 173-806
Cow position: chr11:14468929-14469571 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 191-809
Cow position: chr11:40486586-40487214 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 40

Conread position: 196-811
Cow position: chr11:44232863-44233488 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 207-811
Cow position: chr11:33602194-33601572 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 463

Conread position: 208-811
Cow position: chr11:19100048-19099418 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 224

Conread position: 209-811
Cow position: chr11:10850556-10851181 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 414

Conread position: 209-811
Cow position: chr11:12317634-12317003 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 211-483
Cow position: chr11:14260609-14260331 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 119

Conread position: 211-496
Cow position: chr11:77748218-77748501 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 127

Conread position: 211-508
Cow position: chr11:84386363-84386066 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 109

Conread position: 211-809
Cow position: chr11:44254513-44255138 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 119

Conread position: 211-811
Cow position: chr11:3495481-3496110 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 211-811
Cow position: chr11:4267713-4267088 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 119

Conread position: 211-811
Cow position: chr11:10699308-10698679 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 211-811
Cow position: chr11:10958259-10958896 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 78

Conread position: 211-811
Cow position: chr11:12354455-12353825 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 211-811
Cow position: chr11:29663611-29662987 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 399

Conread position: 211-811
Cow position: chr11:32078341-32077716 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 211-811
Cow position: chr11:35738904-35738277 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 543

Conread position: 211-811
Cow position: chr11:41168256-41167627 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 211-811
Cow position: chr11:43511533-43510908 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 396

Conread position: 211-811
Cow position: chr11:44580791-44580167 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 541

Conread position: 211-811
Cow position: chr11:49172062-49171427 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 211-811
Cow position: chr11:53429583-53428955 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 177

Conread position: 211-811
Cow position: chr11:63861198-63860577 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 255

Conread position: 211-811
Cow position: chr11:67296570-67295940 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 246

Conread position: 211-811
Cow position: chr11:71331940-71332569 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 416

Conread position: 212-811
Cow position: chr11:27922236-27922863 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 19

Conread position: 214-809
Cow position: chr11:78778654-78778040 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 223-803
Cow position: chr11:27834311-27833696 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 29

Conread position: 226-746
Cow position: chr11:24395787-24396334 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 499

Conread position: 226-811
Cow position: chr11:4024888-4024287 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 181

Conread position: 226-811
Cow position: chr11:10093336-10093936 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 176

Conread position: 226-811
Cow position: chr11:26122468-26121853 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 226-811
Cow position: chr11:44154628-44154016 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 226-811
Cow position: chr11:56462814-56463429 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 226-811
Cow position: chr11:58139163-58139761 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 281

Conread position: 227-354
Cow position: chr11:49012606-49012475 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 227-373
Cow position: chr11:68130064-68130216 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 94

Conread position: 227-401
Cow position: chr11:9387339-9387162 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 227-429
Cow position: chr11:38600483-38600274 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 227-441
Cow position: chr11:13088112-13088333 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 227-464
Cow position: chr11:28666989-28667232 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 227-479
Cow position: chr11:9154733-9154477 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 197

Conread position: 227-518
Cow position: chr11:18123832-18123537 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 179

Conread position: 227-546
Cow position: chr11:15987707-15988035 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 227-647
Cow position: chr11:66859878-66859435 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 397

Conread position: 227-676
Cow position: chr11:2534053-2534531 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-693
Cow position: chr11:44515320-44514827 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-803
Cow position: chr11:44516716-44516120 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 498

Conread position: 227-803
Cow position: chr11:52657201-52656614 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 100

Conread position: 227-807
Cow position: chr11:26399936-26400545 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 155

Conread position: 227-808
Cow position: chr11:41177382-41177980 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 241

Conread position: 227-809
Cow position: chr11:66731598-66732193 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 227-809
Cow position: chr11:83284350-83284946 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 496

Conread position: 227-811
Cow position: chr11:260680-260076 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 227-811
Cow position: chr11:3682380-3681778 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 170

Conread position: 227-811
Cow position: chr11:6342915-6343526 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 492

Conread position: 227-811
Cow position: chr11:7121509-7120896 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 227-811
Cow position: chr11:7680418-7681028 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 497

Conread position: 227-811
Cow position: chr11:8444533-8443921 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 227-811
Cow position: chr11:15835375-15835978 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 227-811
Cow position: chr11:19061620-19061007 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 227-811
Cow position: chr11:20731768-20731155 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-811
Cow position: chr11:23494220-23494819 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 339

Conread position: 227-811
Cow position: chr11:25564210-25564819 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 506

Conread position: 227-811
Cow position: chr11:25809289-25808683 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 507

Conread position: 227-811
Cow position: chr11:27659705-27660296 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 201

Conread position: 227-811
Cow position: chr11:27725446-27724834 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-811
Cow position: chr11:28124969-28125582 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 227-811
Cow position: chr11:28227325-28226711 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 227-811
Cow position: chr11:28693512-28692902 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 208

Conread position: 227-811
Cow position: chr11:30190236-30190815 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 227-811
Cow position: chr11:31865072-31865705 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 526

Conread position: 227-811
Cow position: chr11:31928922-31929507 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 96

Conread position: 227-811
Cow position: chr11:32454515-32455121 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 209

Conread position: 227-811
Cow position: chr11:35542614-35542002 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 570

Conread position: 227-811
Cow position: chr11:38640405-38641017 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 555

Conread position: 227-811
Cow position: chr11:39600406-39599784 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 227-811
Cow position: chr11:40773574-40773003 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 133

Conread position: 227-811
Cow position: chr11:41313750-41314362 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 561

Conread position: 227-811
Cow position: chr11:54727918-54728524 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 227-811
Cow position: chr11:57625720-57625123 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 72

Conread position: 227-811
Cow position: chr11:61398159-61397554 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 418

Conread position: 227-811
Cow position: chr11:63391022-63390415 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 497

Conread position: 227-811
Cow position: chr11:63653225-63652610 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 348

Conread position: 227-811
Cow position: chr11:67453109-67453722 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 227-811
Cow position: chr11:73799245-73798634 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 484

Conread position: 227-811
Cow position: chr11:74928254-74928863 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 221

Conread position: 227-811
Cow position: chr11:75403043-75402443 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 227-811
Cow position: chr11:86578381-86578993 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 229-811
Cow position: chr11:41600233-41599616 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 230-385
Cow position: chr11:37116873-37117035 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 230-760
Cow position: chr11:17280124-17279575 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 230-811
Cow position: chr11:17105232-17104635 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 411

Conread position: 231-811
Cow position: chr11:1505538-1504929 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 173

Conread position: 231-811
Cow position: chr11:59871272-59871882 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 220

Conread position: 232-811
Cow position: chr11:58050461-58049860 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 171

Conread position: 232-811
Cow position: chr11:67863816-67863214 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 272

Conread position: 242-809
Cow position: chr11:2568204-2567618 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 172

Conread position: 255-811
Cow position: chr11:48981778-48982357 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 273-788
Cow position: chr11:48168560-48168029 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 137

Conread position: 279-811
Cow position: chr11:52462791-52463356 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 134

Conread position: 280-807
Cow position: chr11:84773678-84774228 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 135

Conread position: 295-811
Cow position: chr11:36931006-36930467 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 91

Conread position: 307-811
Cow position: chr11:59369459-59368968 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 311-811
Cow position: chr11:65281560-65282077 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 388

Conread position: 314-811
Cow position: chr11:57754658-57754153 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 5

Conread position: 331-810
Cow position: chr11:18921022-18920531 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 400

Conread position: 332-811
Cow position: chr11:67920763-67920271 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 23

Conread position: 342-811
Cow position: chr11:52846053-52846542 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 347-811
Cow position: chr11:39151180-39151664 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 87

Conread position: 349-811
Cow position: chr11:5482861-5482379 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 55

Conread position: 349-811
Cow position: chr11:58398916-58399399 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 101

Conread position: 360-811
Cow position: chr11:16230060-16229588 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 92

Conread position: 365-811
Cow position: chr11:33688420-33687982 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 128

Conread position: 384-811
Cow position: chr11:73513743-73513305 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 85

Conread position: 388-809
Cow position: chr11:33733955-33733518 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 54

Conread position: 389-811
Cow position: chr11:26068495-26068044 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 52

Conread position: 391-770
Cow position: chr11:29616670-29616282 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 272

Conread position: 392-811
Cow position: chr11:14260332-14259894 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 219

Conread position: 393-811
Cow position: chr11:48485447-48485007 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 122, 214

Conread position: 397-811
Cow position: chr11:44106307-44106749 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 320

Conread position: 408-811
Cow position: chr11:80789754-80789323 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 62

Conread position: 412-809
Cow position: chr11:21471281-21471690 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 60

Conread position: 412-811
Cow position: chr11:9432074-9432446 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 248, 29

Conread position: 412-811
Cow position: chr11:58805170-58804755 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 60

Conread position: 414-811
Cow position: chr11:9387984-9388404 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 415-811
Cow position: chr11:15995133-15995561 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 424-803
Cow position: chr11:40134150-40133764 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 185

Conread position: 428-810
Cow position: chr11:7719853-7719449 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 430-811
Cow position: chr11:73466535-73466143 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 36

Conread position: 433-811
Cow position: chr11:49936073-49935681 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 183

Conread position: 436-809
Cow position: chr11:40457846-40458241 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 438-809
Cow position: chr11:44875167-44875542 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 124

Conread position: 440-811
Cow position: chr11:41106714-41106327 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 225

Conread position: 441-811
Cow position: chr11:38600025-38599647 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 441-811
Cow position: chr11:81067424-81067804 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 264

Conread position: 442-808
Cow position: chr11:3795915-3796299 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 157

Conread position: 442-811
Cow position: chr11:1667303-1667688 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 186

Conread position: 444-807
Cow position: chr11:17980613-17980229 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 150

Conread position: 446-803
Cow position: chr11:10365709-10365337 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 186

Conread position: 447-811
Cow position: chr11:13087986-13087600 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 454-811
Cow position: chr11:25335828-25336206 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 185

Conread position: 507-811
Cow position: chr11:7328699-7329006 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 38

Conread position: 515-803
Cow position: chr11:15495156-15495447 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 515-811
Cow position: chr11:12077633-12077337 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 515-811
Cow position: chr11:27938377-27938677 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 31

Conread position: 515-811
Cow position: chr11:73137359-73137658 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 517-811
Cow position: chr11:17782256-17781963 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 519-811
Cow position: chr11:3238074-3238369 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 519-811
Cow position: chr11:16548177-16547883 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 520-808
Cow position: chr11:77746433-77746142 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 521-811
Cow position: chr11:59623820-59623526 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 190
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 23

Conread position: 530-771
Cow position: chr11:4675833-4675590 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 537-811
Cow position: chr11:80591149-80591424 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 228

Conread position: 541-807
Cow position: chr11:34297294-34297550 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 6, 54

Conread position: 542-803
Cow position: chr11:30255227-30255496 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 542-811
Cow position: chr11:17998139-17997867 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 189

Conread position: 542-811
Cow position: chr11:25759547-25759810 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 187

Conread position: 542-811
Cow position: chr11:43361919-43361652 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 21

Conread position: 542-811
Cow position: chr11:48427942-48428208 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 94

Conread position: 542-811
Cow position: chr11:74990414-74990687 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 544-809
Cow position: chr11:44915890-44915616 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 544-811
Cow position: chr11:5273777-5273507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 544-811
Cow position: chr11:9870298-9870567 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 119

Conread position: 544-811
Cow position: chr11:13062610-13062340 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 544-811
Cow position: chr11:21619939-21620208 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 16

Conread position: 544-811
Cow position: chr11:30790998-30790729 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 50

Conread position: 546-788
Cow position: chr11:18438747-18438991 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 546-809
Cow position: chr11:2548282-2548549 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 546-809
Cow position: chr11:63167699-63167456 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 546-810
Cow position: chr11:49411773-49411493 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 171

Conread position: 546-811
Cow position: chr11:35242070-35241802 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 546-811
Cow position: chr11:41094063-41093795 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 546-811
Cow position: chr11:63478650-63478918 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 547-774
Cow position: chr11:33319320-33319089 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 548-807
Cow position: chr11:38793387-38793642 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 108

Conread position: 548-811
Cow position: chr11:9154095-9153835 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 104

Conread position: 548-811
Cow position: chr11:10873397-10873647 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 130

Conread position: 548-811
Cow position: chr11:25864802-25864549 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 92

Conread position: 548-811
Cow position: chr11:52128010-52128276 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 551-811
Cow position: chr11:2069152-2069412 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 73

Conread position: 551-811
Cow position: chr11:19490343-19490609 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 51

Conread position: 552-808
Cow position: chr11:18105881-18105625 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 47

Conread position: 552-809
Cow position: chr11:65852352-65852092 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 554-811
Cow position: chr11:46781261-46781002 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 555-811
Cow position: chr11:77748876-77749131 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 35

Conread position: 556-811
Cow position: chr11:35426011-35425763 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 557-811
Cow position: chr11:7229171-7229427 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 7

Conread position: 559-809
Cow position: chr11:63507320-63507575 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 61, 143

Conread position: 567-811
Cow position: chr11:84532440-84532199 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 79, 37

Conread position: 568-811
Cow position: chr11:87155177-87154943 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 51

Conread position: 569-811
Cow position: chr11:23883169-23883414 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 570-811
Cow position: chr11:17832370-17832141 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 86

Conread position: 570-811
Cow position: chr11:66390184-66389940 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 572-811
Cow position: chr11:81317051-81316813 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 114

Conread position: 573-809
Cow position: chr11:67744214-67744447 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 22

Conread position: 573-811
Cow position: chr11:62009976-62009734 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 577-811
Cow position: chr11:38505401-38505164 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 577-811
Cow position: chr11:52515354-52515574 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 79

Conread position: 578-811
Cow position: chr11:30700325-30700561 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 582-811
Cow position: chr11:15988123-15988355 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 592-811
Cow position: chr11:8844022-8844246 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 592-811
Cow position: chr11:31836035-31836251 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 69

Conread position: 594-807
Cow position: chr11:12009927-12010142 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 19

Conread position: 598-811
Cow position: chr11:7704547-7704762 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 168

Conread position: 600-811
Cow position: chr11:56652386-56652176 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 101

Conread position: 600-811
Cow position: chr11:70030274-70030486 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 107

Conread position: 602-811
Cow position: chr11:26482427-26482637 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 602-811
Cow position: chr11:42517196-42517406 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 82

Conread position: 604-811
Cow position: chr11:30164429-30164639 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 608-811
Cow position: chr11:68130272-68130469 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 151

Conread position: 611-811
Cow position: chr11:45155883-45155680 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 614-811
Cow position: chr11:15128643-15128847 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 151

Conread position: 617-811
Cow position: chr11:31834391-31834194 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 619-811
Cow position: chr11:38069167-38069362 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 179

Conread position: 620-811
Cow position: chr11:21853378-21853184 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 621-811
Cow position: chr11:69403347-69403156 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 93

Conread position: 624-803
Cow position: chr11:32762329-32762511 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 644-811
Cow position: chr11:66899198-66899031 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 55

Conread position: 647-811
Cow position: chr11:38235867-38235703 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 159

Conread position: 647-811
Cow position: chr11:44870428-44870585 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 62

Conread position: 657-811
Cow position: chr11:3230237-3230387 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 659-810
Cow position: chr11:82346210-82346063 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 659-811
Cow position: chr11:21372166-21372014 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 128
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 659-811
Cow position: chr11:43917349-43917501 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 659-811
Cow position: chr11:47758071-47757921 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 659-811
Cow position: chr11:77034177-77034025 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 660-811
Cow position: chr11:12111843-12111994 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 662-808
Cow position: chr11:32956898-32956751 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 662-808
Cow position: chr11:32978084-32977937 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 666-811
Cow position: chr11:38638403-38638261 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 671-811
Cow position: chr11:70602350-70602216 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 671-811
Cow position: chr11:77236789-77236931 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 672-804
Cow position: chr11:53772610-53772738 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 673-811
Cow position: chr11:8498996-8499134 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 18

Conread position: 676-811
Cow position: chr11:42794009-42793869 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 119

Conread position: 676-811
Cow position: chr11:70424324-70424457 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 22

Conread position: 677-811
Cow position: chr11:63261274-63261140 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 679-811
Cow position: chr11:38842561-38842694 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 687-811
Cow position: chr11:2308856-2308981 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 692-811
Cow position: chr11:66859040-66858921 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 694-811
Cow position: chr11:64844022-64844139 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 58

Conread position: 704-811
Cow position: chr11:37345903-37346010 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 711-811
Cow position: chr11:37069280-37069183 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 717-811
Cow position: chr11:14650263-14650169 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 720-811
Cow position: chr11:64904063-64904154 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 721-811
Cow position: chr11:33687496-33687405 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 724-811
Cow position: chr11:9079354-9079267 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 733-809
Cow position: chr11:76370851-76370775 (view UCSC Genome Browser custom track)
Alignm length: 77
Alignm identity: 73
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.