Cow genome map
| Conread name: | Liv1-LVR010001E10 |
| Conread position: | 1-223 |
| Cow position: | chr17:21714343-21714564 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 1-545 |
| Cow position: | chr17:253177-253773 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 419 |
| Conread position: | 1-609 |
| Cow position: | chr17:18124580-18123912 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 446 |
| Conread position: | 1-783 |
| Cow position: | chr17:24291996-24292830 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 1-803 |
| Cow position: | chr17:147290-148133 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 605 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 249 |
| Conread position: | 1-803 |
| Cow position: | chr17:29825605-29824742 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 654 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 1-806 |
| Cow position: | chr17:1655394-1654541 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 122 |
| Conread position: | 1-811 |
| Cow position: | chr17:452192-453074 (view UCSC Genome Browser custom track) |
| Alignm length: | 892 |
| Alignm identity: | 632 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 501 |
| Conread position: | 1-811 |
| Cow position: | chr17:1882626-1883472 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 595 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 1-811 |
| Cow position: | chr17:6262220-6263083 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 630 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 159 |
| Conread position: | 1-811 |
| Cow position: | chr17:15327643-15328509 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 631 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 1-811 |
| Cow position: | chr17:18100724-18099846 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 642 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-811 |
| Cow position: | chr17:20085419-20084582 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 622 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 213 |
| Conread position: | 1-811 |
| Cow position: | chr17:20094785-20093931 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 623 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 1-811 |
| Cow position: | chr17:22562505-22563372 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 643 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 303 |
| Conread position: | 2-348 |
| Cow position: | chr17:20233107-20233493 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 5, 100 |
| Conread position: | 7-811 |
| Cow position: | chr17:4481515-4480655 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 633 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 212 |
| Conread position: | 7-811 |
| Cow position: | chr17:16855732-16854870 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 467 |
| Conread position: | 24-505 |
| Cow position: | chr17:20092206-20091708 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 323 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 155, 46 |
| Conread position: | 26-148 |
| Cow position: | chr17:15373788-15373912 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 98-811 |
| Cow position: | chr17:17220827-17221541 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 118-457 |
| Cow position: | chr17:43453634-43453264 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 190-779 |
| Cow position: | chr17:21067078-21066476 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 207-809 |
| Cow position: | chr17:1569605-1568994 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 208-379 |
| Cow position: | chr17:13725344-13725166 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 211-354 |
| Cow position: | chr17:22504229-22504083 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 211-427 |
| Cow position: | chr17:11084811-11084589 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 211-528 |
| Cow position: | chr17:2582887-2583209 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 211-673 |
| Cow position: | chr17:22107038-22106545 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 211-793 |
| Cow position: | chr17:731885-731282 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 231 |
| Conread position: | 211-803 |
| Cow position: | chr17:15808579-15809207 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 211-808 |
| Cow position: | chr17:138212-138832 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 388 |
| Conread position: | 211-809 |
| Cow position: | chr17:1784947-1784314 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 411 |
| Conread position: | 211-809 |
| Cow position: | chr17:24027390-24026757 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 211-809 |
| Cow position: | chr17:38828519-38829107 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 307 |
| Conread position: | 211-810 |
| Cow position: | chr17:25738903-25739523 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 211-811 |
| Cow position: | chr17:6071137-6071769 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 211-811 |
| Cow position: | chr17:6122378-6123011 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 211-811 |
| Cow position: | chr17:14250503-14249878 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 49 |
| Conread position: | 211-811 |
| Cow position: | chr17:15438404-15439019 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 211-811 |
| Cow position: | chr17:40810349-40810979 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 226-804 |
| Cow position: | chr17:2150812-2151386 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 226-811 |
| Cow position: | chr17:2178488-2179071 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 168 |
| Conread position: | 226-811 |
| Cow position: | chr17:8204550-8205179 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 226-811 |
| Cow position: | chr17:14242447-14243054 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 215 |
| Conread position: | 226-811 |
| Cow position: | chr17:29949832-29950440 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 192 |
| Conread position: | 227-486 |
| Cow position: | chr17:14006002-14006272 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 177 |
| Conread position: | 227-503 |
| Cow position: | chr17:8211276-8211560 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 227-652 |
| Cow position: | chr17:11785501-11785952 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 227-761 |
| Cow position: | chr17:19215780-19215217 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 394 |
| Conread position: | 227-807 |
| Cow position: | chr17:19406676-19406088 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 227-809 |
| Cow position: | chr17:1312141-1311537 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 227-809 |
| Cow position: | chr17:15374027-15374620 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 385 |
| Conread position: | 227-809 |
| Cow position: | chr17:43991100-43991722 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 277 |
| Conread position: | 227-811 |
| Cow position: | chr17:183763-184375 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 227-811 |
| Cow position: | chr17:2078272-2078867 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 218 |
| Conread position: | 227-811 |
| Cow position: | chr17:2245441-2244844 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 190 |
| Conread position: | 227-811 |
| Cow position: | chr17:2264809-2265416 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 156 |
| Conread position: | 227-811 |
| Cow position: | chr17:2838646-2839250 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 421 |
| Conread position: | 227-811 |
| Cow position: | chr17:9752413-9753014 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 227-811 |
| Cow position: | chr17:14871294-14871911 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 227-811 |
| Cow position: | chr17:18591045-18591649 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 227-811 |
| Cow position: | chr17:21770294-21770908 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 227-811 |
| Cow position: | chr17:27792159-27791560 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 421 |
| Conread position: | 227-811 |
| Cow position: | chr17:29156001-29156601 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 227-811 |
| Cow position: | chr17:33290340-33289748 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 230-811 |
| Cow position: | chr17:4210547-4211157 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 230-811 |
| Cow position: | chr17:10842892-10843489 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 231-423 |
| Cow position: | chr17:18197495-18197689 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 119, 49 |
| Conread position: | 231-785 |
| Cow position: | chr17:10270726-10270151 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 245 |
| Conread position: | 231-809 |
| Cow position: | chr17:4062958-4063564 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 220 |
| Conread position: | 231-809 |
| Cow position: | chr17:4084691-4085293 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 231-811 |
| Cow position: | chr17:4569871-4570440 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 231-811 |
| Cow position: | chr17:24784814-24785418 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 208 |
| Conread position: | 233-799 |
| Cow position: | chr17:3314725-3315303 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 233-811 |
| Cow position: | chr17:27977742-27978332 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 212 |
| Conread position: | 234-811 |
| Cow position: | chr17:1457758-1457152 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 264 |
| Conread position: | 259-811 |
| Cow position: | chr17:16118796-16118237 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 275-811 |
| Cow position: | chr17:20214767-20215311 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 290-809 |
| Cow position: | chr17:5043906-5043369 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 325-809 |
| Cow position: | chr17:23722337-23722837 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 336 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 331-811 |
| Cow position: | chr17:145449-144978 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 332-811 |
| Cow position: | chr17:15117540-15118045 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 376-811 |
| Cow position: | chr17:21766668-21767121 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 389 |
| Conread position: | 385-811 |
| Cow position: | chr17:40281828-40282238 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 408-808 |
| Cow position: | chr17:51267-50875 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 58 |
| Conread position: | 412-783 |
| Cow position: | chr17:15229225-15228840 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 206 |
| Conread position: | 414-811 |
| Cow position: | chr17:11084315-11083907 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 139 |
| Conread position: | 415-809 |
| Cow position: | chr17:30412777-30413194 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 429-811 |
| Cow position: | chr17:34236425-34236023 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 431-785 |
| Cow position: | chr17:20033265-20033635 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 271 |
| Conread position: | 433-811 |
| Cow position: | chr17:29212462-29212860 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 287 |
| Conread position: | 450-811 |
| Cow position: | chr17:43471745-43471363 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 456-756 |
| Cow position: | chr17:18241849-18242167 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 64, 252 |
| Conread position: | 499-811 |
| Cow position: | chr17:18198268-18198582 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 515-811 |
| Cow position: | chr17:14006356-14006652 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 515-811 |
| Cow position: | chr17:15853663-15853963 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 515-811 |
| Cow position: | chr17:18777901-18777602 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 518-811 |
| Cow position: | chr17:8211994-8212284 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 519-811 |
| Cow position: | chr17:29079315-29079594 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 528-811 |
| Cow position: | chr17:20078725-20078449 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 171 |
| Conread position: | 539-811 |
| Cow position: | chr17:3305529-3305804 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 5 |
| Conread position: | 540-811 |
| Cow position: | chr17:14232751-14232476 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 542-810 |
| Cow position: | chr17:14213061-14212791 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 542-810 |
| Cow position: | chr17:17127961-17128232 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 542-811 |
| Cow position: | chr17:37415933-37415660 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 544-808 |
| Cow position: | chr17:43145403-43145139 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 112 |
| Conread position: | 544-811 |
| Cow position: | chr17:16903543-16903807 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 167 |
| Conread position: | 544-811 |
| Cow position: | chr17:17087062-17086794 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 546-804 |
| Cow position: | chr17:3237389-3237632 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 183, 50 |
| Conread position: | 546-811 |
| Cow position: | chr17:4635815-4635547 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 546-811 |
| Cow position: | chr17:8222665-8222933 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 546-811 |
| Cow position: | chr17:15351007-15351267 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 127 |
| Conread position: | 546-811 |
| Cow position: | chr17:16447518-16447254 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 143 |
| Conread position: | 547-807 |
| Cow position: | chr17:36266297-36266047 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 551-811 |
| Cow position: | chr17:31232644-31232898 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 552-811 |
| Cow position: | chr17:36790037-36790293 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 553-811 |
| Cow position: | chr17:254086-254325 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 555-811 |
| Cow position: | chr17:2698522-2698783 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 559-811 |
| Cow position: | chr17:2583367-2583620 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 573-811 |
| Cow position: | chr17:1672287-1672526 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 577-811 |
| Cow position: | chr17:11338158-11337937 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 79 |
| Conread position: | 581-811 |
| Cow position: | chr17:29471434-29471665 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 584-811 |
| Cow position: | chr17:44481844-44482076 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 590-809 |
| Cow position: | chr17:28024898-28024676 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 595-808 |
| Cow position: | chr17:13990245-13990041 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 596-811 |
| Cow position: | chr17:21666014-21666227 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 600-811 |
| Cow position: | chr17:18123657-18123448 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 603-809 |
| Cow position: | chr17:36816904-36817101 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 613-807 |
| Cow position: | chr17:45878661-45878856 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 620-810 |
| Cow position: | chr17:42247816-42247637 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 625-811 |
| Cow position: | chr17:38991792-38991980 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 644-811 |
| Cow position: | chr17:29041839-29041673 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 660-811 |
| Cow position: | chr17:5380032-5380179 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 661-811 |
| Cow position: | chr17:2201375-2201525 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-811 |
| Cow position: | chr17:8449801-8449939 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 671-811 |
| Cow position: | chr17:36747433-36747301 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 675-811 |
| Cow position: | chr17:22134289-22134424 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 679-811 |
| Cow position: | chr17:16505651-16505519 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 702-811 |
| Cow position: | chr17:18421504-18421613 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-811 |
| Cow position: | chr17:12290354-12290259 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 717-809 |
| Cow position: | chr17:42313018-42313110 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 733-807 |
| Cow position: | chr17:980035-979961 (view UCSC Genome Browser custom track) |
| Alignm length: | 75 |
| Alignm identity: | 71 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 733-811 |
| Cow position: | chr17:25551544-25551466 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 72 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.