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Cow genome map

           
Conread name:
           
Liv1-LVR010001E10
        

               
Conread position:
               
1-165
               

               
Cow position:
               
chr28:5816174-5816338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr28:15685931-15686094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr28:8718451-8718093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr28:8381569-8382074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr28:1384913-1384363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
1-811
               

               
Cow position:
               
chr28:21379057-21379890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 168
               

               
Conread position:
               
1-811
               

               
Cow position:
               
chr28:23310793-23309939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
639
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 251
               

               
Conread position:
               
1-811
               

               
Cow position:
               
chr28:29037124-29036255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-811
               

               
Cow position:
               
chr28:30534541-30533663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
2-799
               

               
Cow position:
               
chr28:15604137-15605002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
639
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr28:6061313-6061618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
7-811
               

               
Cow position:
               
chr28:10771624-10772473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
618
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
9-810
               

               
Cow position:
               
chr28:3004979-3004122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
646
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
26-811
               

               
Cow position:
               
chr28:21362066-21362905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
33-811
               

               
Cow position:
               
chr28:26924079-26923232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
615
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 466
               

               
Conread position:
               
39-803
               

               
Cow position:
               
chr28:443966-444797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
609
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
55-175
               

               
Cow position:
               
chr28:2122212-2122334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
55-707
               

               
Cow position:
               
chr28:7829084-7829799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
58-811
               

               
Cow position:
               
chr28:14491936-14492709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
71-783
               

               
Cow position:
               
chr28:10643891-10643156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
73-811
               

               
Cow position:
               
chr28:16180968-16181765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
98-548
               

               
Cow position:
               
chr28:4958884-4958400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 201
               

               
Conread position:
               
170-811
               

               
Cow position:
               
chr28:26420268-26419604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
183-811
               

               
Cow position:
               
chr28:13606186-13606825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
185-811
               

               
Cow position:
               
chr28:28358042-28357387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 314
               

               
Conread position:
               
202-811
               

               
Cow position:
               
chr28:15352355-15351727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
204-625
               

               
Cow position:
               
chr28:5569132-5569572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
207-807
               

               
Cow position:
               
chr28:3189266-3188624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 6
               

               
Conread position:
               
208-811
               

               
Cow position:
               
chr28:13462729-13463360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 232
               

               
Conread position:
               
211-370
               

               
Cow position:
               
chr28:7743910-7744072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
211-528
               

               
Cow position:
               
chr28:12407445-12407121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
211-692
               

               
Cow position:
               
chr28:1215062-1214552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
211-695
               

               
Cow position:
               
chr28:15033310-15032797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
211-788
               

               
Cow position:
               
chr28:785434-786043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
211-793
               

               
Cow position:
               
chr28:28928604-28929211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 437
               

               
Conread position:
               
211-807
               

               
Cow position:
               
chr28:2644483-2645107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 571
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:5111950-5111326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 498
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:5210890-5211518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 589
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:5636819-5637447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 392
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:5748938-5748309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:5940254-5940883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:6959001-6959626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:7004795-7005424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:12649998-12650615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 450
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:17391183-17391830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:17664198-17663552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:18517376-18516749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:20935645-20935015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:22255430-22254803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 528
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:25069601-25070244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 233
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:29822956-29823582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 515
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:32786653-32786030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:33255090-33255718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:33639338-33639965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 417
               

               
Conread position:
               
211-811
               

               
Cow position:
               
chr28:34597015-34597641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 118
               

               
Conread position:
               
216-806
               

               
Cow position:
               
chr28:1507651-1508264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
223-707
               

               
Cow position:
               
chr28:12154622-12155134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 277
               

               
Conread position:
               
226-456
               

               
Cow position:
               
chr28:24488919-24489148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
226-763
               

               
Cow position:
               
chr28:2088356-2088922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 531
               

               
Conread position:
               
226-808
               

               
Cow position:
               
chr28:17600199-17599591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 168
               

               
Conread position:
               
226-811
               

               
Cow position:
               
chr28:1812176-1811587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 359
               

               
Conread position:
               
226-811
               

               
Cow position:
               
chr28:6536012-6535401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
226-811
               

               
Cow position:
               
chr28:24498833-24499451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 260
               

               
Conread position:
               
226-811
               

               
Cow position:
               
chr28:30097661-30098273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 473
               

               
Conread position:
               
227-431
               

               
Cow position:
               
chr28:34879633-34879848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 188
               

               
Conread position:
               
227-472
               

               
Cow position:
               
chr28:15686196-15686445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
227-580
               

               
Cow position:
               
chr28:12936627-12936247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
227-758
               

               
Cow position:
               
chr28:1196898-1197472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 165
               

               
Conread position:
               
227-770
               

               
Cow position:
               
chr28:13880307-13880883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 214
               

               
Conread position:
               
227-792
               

               
Cow position:
               
chr28:5571420-5572021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 104
               

               
Conread position:
               
227-808
               

               
Cow position:
               
chr28:22230545-22229939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 172
               

               
Conread position:
               
227-810
               

               
Cow position:
               
chr28:20967885-20967273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:482924-482312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 589
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:3645231-3645832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:5816436-5817018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:6474462-6473859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:6777220-6776606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:7021829-7021228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
85, 235
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:7335773-7336380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:9181654-9182266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 185
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:10302624-10303235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 192
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:11502446-11501825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 237
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:14511231-14511823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:14665932-14666542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:21896079-21896679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 182
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:23674607-23675210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:24621057-24620467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 325
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:24885645-24886257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 221
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:28441533-28442129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
227-811
               

               
Cow position:
               
chr28:28470807-28471421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 531
               

               
Conread position:
               
230-811
               

               
Cow position:
               
chr28:6230899-6230298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
231-808
               

               
Cow position:
               
chr28:3744760-3745357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 357
               

               
Conread position:
               
231-811
               

               
Cow position:
               
chr28:21568694-21569290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
232-811
               

               
Cow position:
               
chr28:25702122-25701545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
242-811
               

               
Cow position:
               
chr28:10480077-10479500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
243-802
               

               
Cow position:
               
chr28:17371779-17371256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
247-811
               

               
Cow position:
               
chr28:30966018-30966600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
251-811
               

               
Cow position:
               
chr28:29435978-29435410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 192
               

               
Conread position:
               
254-799
               

               
Cow position:
               
chr28:15588890-15589459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
255-808
               

               
Cow position:
               
chr28:10279666-10280237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 231
               

               
Conread position:
               
256-806
               

               
Cow position:
               
chr28:16041840-16041272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 190
               

               
Conread position:
               
260-811
               

               
Cow position:
               
chr28:25827293-25826722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
266-811
               

               
Cow position:
               
chr28:4213716-4214287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 234
               

               
Conread position:
               
280-811
               

               
Cow position:
               
chr28:34730572-34731129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 111
               

               
Conread position:
               
285-809
               

               
Cow position:
               
chr28:17603180-17602646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
303-811
               

               
Cow position:
               
chr28:12997548-12998074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
311-809
               

               
Cow position:
               
chr28:15600863-15600352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 225
               

               
Conread position:
               
313-811
               

               
Cow position:
               
chr28:8718079-8717556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
319-778
               

               
Cow position:
               
chr28:28184264-28184756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 312
               

               
Conread position:
               
327-811
               

               
Cow position:
               
chr28:4376501-4376020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 242
               

               
Conread position:
               
330-765
               

               
Cow position:
               
chr28:12047646-12047189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 285
               

               
Conread position:
               
337-811
               

               
Cow position:
               
chr28:23619865-23620350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 259
               

               
Conread position:
               
349-811
               

               
Cow position:
               
chr28:10294728-10295196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
382-809
               

               
Cow position:
               
chr28:601227-600788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
387-811
               

               
Cow position:
               
chr28:14149946-14150385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
408-811
               

               
Cow position:
               
chr28:7744075-7744494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 235
               

               
Conread position:
               
408-811
               

               
Cow position:
               
chr28:21768321-21767907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 322
               

               
Conread position:
               
412-811
               

               
Cow position:
               
chr28:10162222-10162622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
412-811
               

               
Cow position:
               
chr28:13522663-13523080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
426-809
               

               
Cow position:
               
chr28:17031100-17030702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
438-811
               

               
Cow position:
               
chr28:21104968-21104582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
466-811
               

               
Cow position:
               
chr28:25408660-25409032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 190
               

               
Conread position:
               
476-811
               

               
Cow position:
               
chr28:5116961-5117294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
493-811
               

               
Cow position:
               
chr28:30870137-30870469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
503-811
               

               
Cow position:
               
chr28:4958419-4958109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
507-811
               

               
Cow position:
               
chr28:34083179-34082875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
515-811
               

               
Cow position:
               
chr28:16597248-16597544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
528-809
               

               
Cow position:
               
chr28:28635214-28635499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
542-811
               

               
Cow position:
               
chr28:18140577-18140317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
544-804
               

               
Cow position:
               
chr28:15935751-15935490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 96
               

               
Conread position:
               
544-809
               

               
Cow position:
               
chr28:1384328-1384058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
544-809
               

               
Cow position:
               
chr28:15687428-15687689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
544-811
               

               
Cow position:
               
chr28:3462013-3462283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
544-811
               

               
Cow position:
               
chr28:7785095-7784825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
544-811
               

               
Cow position:
               
chr28:10473094-10473355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 156
               

               
Conread position:
               
544-811
               

               
Cow position:
               
chr28:11256759-11256490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
544-811
               

               
Cow position:
               
chr28:12407052-12406765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
544-811
               

               
Cow position:
               
chr28:23025501-23025769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
545-811
               

               
Cow position:
               
chr28:17761768-17762036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
546-754
               

               
Cow position:
               
chr28:23839149-23839354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
100, 140
               

               
Conread position:
               
546-788
               

               
Cow position:
               
chr28:5772551-5772791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
546-808
               

               
Cow position:
               
chr28:32301458-32301191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
546-811
               

               
Cow position:
               
chr28:3001727-3001462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 186
               

               
Conread position:
               
546-811
               

               
Cow position:
               
chr28:5804398-5804663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
102, 161
               

               
Conread position:
               
548-811
               

               
Cow position:
               
chr28:25847143-25847398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
549-811
               

               
Cow position:
               
chr28:23615275-23615541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
550-808
               

               
Cow position:
               
chr28:12166367-12166105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 152
               

               
Conread position:
               
553-804
               

               
Cow position:
               
chr28:13725072-13725323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
556-811
               

               
Cow position:
               
chr28:1944156-1943899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
560-811
               

               
Cow position:
               
chr28:24488242-24487990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 205
               

               
Conread position:
               
565-811
               

               
Cow position:
               
chr28:28723376-28723620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 197
               

               
Conread position:
               
570-808
               

               
Cow position:
               
chr28:10649769-10649527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
576-811
               

               
Cow position:
               
chr28:29807280-29807044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
577-809
               

               
Cow position:
               
chr28:12936114-12935879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 205
               

               
Conread position:
               
577-811
               

               
Cow position:
               
chr28:34200874-34200647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
580-811
               

               
Cow position:
               
chr28:10578935-10578699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
585-811
               

               
Cow position:
               
chr28:2223198-2222967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
587-811
               

               
Cow position:
               
chr28:12429378-12429602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
602-811
               

               
Cow position:
               
chr28:25828580-25828792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
606-811
               

               
Cow position:
               
chr28:29223096-29222888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
613-811
               

               
Cow position:
               
chr28:34879244-34879046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
614-803
               

               
Cow position:
               
chr28:16543502-16543313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
621-811
               

               
Cow position:
               
chr28:23543830-23544019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
627-811
               

               
Cow position:
               
chr28:23868448-23868635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
634-803
               

               
Cow position:
               
chr28:5336588-5336416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
644-809
               

               
Cow position:
               
chr28:5768180-5768345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
644-811
               

               
Cow position:
               
chr28:3652840-3652999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
644-811
               

               
Cow position:
               
chr28:19300285-19300447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
659-809
               

               
Cow position:
               
chr28:28340103-28340250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
660-808
               

               
Cow position:
               
chr28:15676882-15677029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
660-811
               

               
Cow position:
               
chr28:24997667-24997517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
660-811
               

               
Cow position:
               
chr28:26718198-26718358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
665-811
               

               
Cow position:
               
chr28:16212078-16211938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
681-811
               

               
Cow position:
               
chr28:17209703-17209579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
689-803
               

               
Cow position:
               
chr28:6319872-6319758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
733-811
               

               
Cow position:
               
chr28:17131817-17131739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
79
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.