Cow genome map

Conread name: Liv1-LVR010001E10

Conread position: 1-141
Cow position: chr6:65896500-65896359 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 1-149
Cow position: chr6:3685340-3685493 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 1-162
Cow position: chr6:41676389-41676550 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 74

Conread position: 1-176
Cow position: chr6:42266185-42266363 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 1-328
Cow position: chr6:3573234-3573587 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-463
Cow position: chr6:1796214-1795712 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 48

Conread position: 1-503
Cow position: chr6:2377153-2377700 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-678
Cow position: chr6:50720560-50721289 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 48

Conread position: 1-708
Cow position: chr6:40159053-40158294 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 134

Conread position: 1-711
Cow position: chr6:14840313-14841057 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 26

Conread position: 1-769
Cow position: chr6:38874209-38873377 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 455

Conread position: 1-785
Cow position: chr6:14927910-14928759 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-809
Cow position: chr6:3273027-3272158 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 38

Conread position: 1-809
Cow position: chr6:12628368-12629220 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 68

Conread position: 1-809
Cow position: chr6:41230948-41231812 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 138

Conread position: 1-810
Cow position: chr6:55238144-55239015 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 688

Conread position: 1-811
Cow position: chr6:3151678-3152541 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 808

Conread position: 1-811
Cow position: chr6:10235660-10236521 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 36

Conread position: 1-811
Cow position: chr6:16767385-16766516 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 423

Conread position: 1-811
Cow position: chr6:21833197-21832335 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 118

Conread position: 1-811
Cow position: chr6:28001932-28001070 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 732

Conread position: 1-811
Cow position: chr6:37387031-37387892 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 430

Conread position: 1-811
Cow position: chr6:40277523-40278379 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 1-811
Cow position: chr6:51149390-51150268 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-811
Cow position: chr6:53936177-53935312 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 623

Conread position: 1-811
Cow position: chr6:65820133-65819256 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 751

Conread position: 2-811
Cow position: chr6:35417467-35416647 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 125

Conread position: 3-147
Cow position: chr6:58030367-58030513 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 7-811
Cow position: chr6:50570656-50571517 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 379

Conread position: 10-811
Cow position: chr6:47040740-47039884 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 763

Conread position: 24-707
Cow position: chr6:8536821-8536073 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 283

Conread position: 38-811
Cow position: chr6:16704237-16703412 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 31

Conread position: 51-811
Cow position: chr6:38989273-38988499 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 117

Conread position: 64-767
Cow position: chr6:9734440-9733689 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 51

Conread position: 162-415
Cow position: chr6:705514-705775 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 5

Conread position: 175-811
Cow position: chr6:16419020-16418356 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 191-771
Cow position: chr6:65929928-65930544 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 15

Conread position: 207-811
Cow position: chr6:60875992-60876622 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 443

Conread position: 208-771
Cow position: chr6:28488871-28488292 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 100

Conread position: 208-811
Cow position: chr6:50636984-50637595 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 227

Conread position: 211-401
Cow position: chr6:66562224-66562421 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 211-429
Cow position: chr6:27527289-27527065 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 82, 0

Conread position: 211-455
Cow position: chr6:39435224-39434968 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 211-595
Cow position: chr6:8756120-8755710 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 211-610
Cow position: chr6:43778216-43778640 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 414

Conread position: 211-640
Cow position: chr6:62577485-62577030 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 211-652
Cow position: chr6:52696335-52696797 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 192

Conread position: 211-707
Cow position: chr6:43790881-43790354 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 211-707
Cow position: chr6:48875634-48875118 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 275

Conread position: 211-804
Cow position: chr6:25790999-25790382 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 498

Conread position: 211-809
Cow position: chr6:20450665-20451284 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 196

Conread position: 211-810
Cow position: chr6:39331833-39331208 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 177

Conread position: 211-811
Cow position: chr6:328662-328037 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 211-811
Cow position: chr6:478248-478876 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 181

Conread position: 211-811
Cow position: chr6:1536407-1537031 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 211-811
Cow position: chr6:3886809-3886179 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 432

Conread position: 211-811
Cow position: chr6:8204877-8205513 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 279

Conread position: 211-811
Cow position: chr6:16592665-16593276 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 258

Conread position: 211-811
Cow position: chr6:17121085-17121715 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 304

Conread position: 211-811
Cow position: chr6:19713534-19712919 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 211-811
Cow position: chr6:24241988-24242613 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 371

Conread position: 211-811
Cow position: chr6:26772424-26771796 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 577

Conread position: 211-811
Cow position: chr6:27475111-27475732 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 501

Conread position: 211-811
Cow position: chr6:30270206-30269576 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 211-811
Cow position: chr6:34493374-34494001 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 211-811
Cow position: chr6:34504825-34504195 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 211-811
Cow position: chr6:34844015-34843387 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 116

Conread position: 211-811
Cow position: chr6:36530981-36531600 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 96

Conread position: 211-811
Cow position: chr6:41192018-41192651 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 617

Conread position: 211-811
Cow position: chr6:44018131-44017502 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 209

Conread position: 211-811
Cow position: chr6:51717243-51717880 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 260

Conread position: 211-811
Cow position: chr6:51732779-51733407 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 470

Conread position: 211-811
Cow position: chr6:64719018-64719644 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 212-811
Cow position: chr6:37385853-37386473 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 17

Conread position: 215-685
Cow position: chr6:34129158-34129657 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 252

Conread position: 226-455
Cow position: chr6:64425208-64425444 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 45, 98

Conread position: 226-498
Cow position: chr6:28171615-28171895 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 226-785
Cow position: chr6:182831-182245 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 480

Conread position: 226-790
Cow position: chr6:916755-917348 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 226-791
Cow position: chr6:41408118-41408710 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 507

Conread position: 226-808
Cow position: chr6:40974898-40975491 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 483

Conread position: 226-811
Cow position: chr6:3485686-3485093 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 251

Conread position: 226-811
Cow position: chr6:11722483-11721882 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 213

Conread position: 226-811
Cow position: chr6:15138454-15137847 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 245

Conread position: 226-811
Cow position: chr6:25358169-25357541 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 226-811
Cow position: chr6:28103152-28102543 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 363

Conread position: 226-811
Cow position: chr6:35874000-35873403 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 174

Conread position: 226-811
Cow position: chr6:39999744-39999133 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 482

Conread position: 226-811
Cow position: chr6:50486062-50485458 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 391

Conread position: 226-811
Cow position: chr6:55539557-55538945 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 112

Conread position: 227-360
Cow position: chr6:13979476-13979612 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 227-401
Cow position: chr6:46296986-46297167 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 227-427
Cow position: chr6:40759163-40759365 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 70, 158

Conread position: 227-503
Cow position: chr6:21711274-21711557 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 227-533
Cow position: chr6:18986729-18987046 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 45, 108

Conread position: 227-594
Cow position: chr6:41389739-41389350 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 340

Conread position: 227-627
Cow position: chr6:45591261-45591687 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-653
Cow position: chr6:11829913-11829465 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 88

Conread position: 227-677
Cow position: chr6:24584652-24584187 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 227-739
Cow position: chr6:2581131-2581655 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 227-785
Cow position: chr6:43087879-43087298 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 390

Conread position: 227-808
Cow position: chr6:11019370-11019981 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-808
Cow position: chr6:15924876-15924276 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 228

Conread position: 227-809
Cow position: chr6:4904261-4903677 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 227-811
Cow position: chr6:2367519-2366936 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 117

Conread position: 227-811
Cow position: chr6:6120266-6119667 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 232

Conread position: 227-811
Cow position: chr6:7138627-7138016 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 530

Conread position: 227-811
Cow position: chr6:7467938-7467325 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 585

Conread position: 227-811
Cow position: chr6:9738545-9737928 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 394

Conread position: 227-811
Cow position: chr6:10043928-10044541 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-811
Cow position: chr6:10611537-10612157 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 225

Conread position: 227-811
Cow position: chr6:10651072-10650468 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 62

Conread position: 227-811
Cow position: chr6:11354450-11353847 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 216

Conread position: 227-811
Cow position: chr6:11870218-11869608 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 178

Conread position: 227-811
Cow position: chr6:13308672-13308072 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 333

Conread position: 227-811
Cow position: chr6:16050577-16049967 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 472

Conread position: 227-811
Cow position: chr6:19104196-19103582 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 227-811
Cow position: chr6:28064704-28065316 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 555

Conread position: 227-811
Cow position: chr6:28160131-28160735 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 227-811
Cow position: chr6:39912038-39912648 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 369

Conread position: 227-811
Cow position: chr6:39956781-39957392 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 402
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 129, 10

Conread position: 227-811
Cow position: chr6:41676651-41677255 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 65

Conread position: 227-811
Cow position: chr6:42266449-42267054 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 421

Conread position: 227-811
Cow position: chr6:43620444-43621057 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-811
Cow position: chr6:44147235-44146621 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 227-811
Cow position: chr6:44950748-44950132 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 525

Conread position: 227-811
Cow position: chr6:51867708-51868313 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 417

Conread position: 227-811
Cow position: chr6:53462439-53461853 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 151

Conread position: 227-811
Cow position: chr6:56452382-56451769 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 227-811
Cow position: chr6:59618779-59619402 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 227-811
Cow position: chr6:68029890-68030505 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 228-811
Cow position: chr6:5947062-5946449 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 230-811
Cow position: chr6:33465678-33466283 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 294

Conread position: 230-811
Cow position: chr6:53810333-53810913 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 58

Conread position: 231-424
Cow position: chr6:52194252-52194052 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 41, 116

Conread position: 231-785
Cow position: chr6:28550360-28549756 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 287

Conread position: 231-810
Cow position: chr6:43330694-43330098 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 385
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 134

Conread position: 231-811
Cow position: chr6:26668307-26667698 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 233-811
Cow position: chr6:43186823-43187435 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 242-809
Cow position: chr6:20553513-20552919 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 533

Conread position: 242-811
Cow position: chr6:34074587-34075193 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 243-544
Cow position: chr6:57472683-57472982 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 59

Conread position: 247-811
Cow position: chr6:11289723-11289141 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 489

Conread position: 249-808
Cow position: chr6:11168241-11168830 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 237

Conread position: 252-811
Cow position: chr6:33950411-33949833 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 221

Conread position: 270-811
Cow position: chr6:31010052-31009495 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 336

Conread position: 273-811
Cow position: chr6:55474066-55474632 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 226

Conread position: 276-811
Cow position: chr6:52249737-52249188 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 169

Conread position: 277-811
Cow position: chr6:59596026-59596567 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 170

Conread position: 288-811
Cow position: chr6:15276464-15275914 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 224

Conread position: 292-811
Cow position: chr6:46947600-46948142 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 296-811
Cow position: chr6:67553022-67553558 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 311-811
Cow position: chr6:14143833-14144344 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 189

Conread position: 311-811
Cow position: chr6:53543678-53543157 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 311-811
Cow position: chr6:65875481-65874958 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 64

Conread position: 313-811
Cow position: chr6:40550896-40550374 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 132

Conread position: 318-803
Cow position: chr6:14950859-14950334 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 318-811
Cow position: chr6:50121120-50120604 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 292

Conread position: 329-811
Cow position: chr6:3119717-3119211 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 28

Conread position: 329-811
Cow position: chr6:3573615-3574112 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 69

Conread position: 331-773
Cow position: chr6:57181640-57182102 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 269

Conread position: 331-809
Cow position: chr6:530060-529568 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 54

Conread position: 337-809
Cow position: chr6:58605356-58605851 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 377

Conread position: 337-811
Cow position: chr6:24632418-24631920 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 342-811
Cow position: chr6:6182872-6182393 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 349-809
Cow position: chr6:10571052-10570565 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 325
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 172, 73

Conread position: 349-811
Cow position: chr6:22044166-22043683 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 430

Conread position: 349-811
Cow position: chr6:30317099-30316615 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 31

Conread position: 349-811
Cow position: chr6:60332185-60332669 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 352-811
Cow position: chr6:58030625-58031103 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 291

Conread position: 368-811
Cow position: chr6:32419814-32420274 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 54

Conread position: 376-811
Cow position: chr6:1498070-1498524 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 113

Conread position: 388-805
Cow position: chr6:33508146-33508560 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 215

Conread position: 389-809
Cow position: chr6:705887-706322 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 168

Conread position: 390-786
Cow position: chr6:4388619-4389042 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 390-809
Cow position: chr6:55945542-55945101 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 296
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 129, 191

Conread position: 406-811
Cow position: chr6:8634401-8633988 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 54

Conread position: 408-792
Cow position: chr6:55042220-55041820 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 104, 42

Conread position: 408-803
Cow position: chr6:6595324-6595743 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 412-775
Cow position: chr6:16699111-16699481 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 253

Conread position: 414-809
Cow position: chr6:618323-618736 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 168

Conread position: 416-811
Cow position: chr6:65848453-65848043 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 50

Conread position: 423-811
Cow position: chr6:33983739-33984141 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 425-811
Cow position: chr6:27527041-27526637 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 192

Conread position: 438-810
Cow position: chr6:47171013-47171387 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 171

Conread position: 441-809
Cow position: chr6:58016293-58016673 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 441-811
Cow position: chr6:2089217-2089600 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 201

Conread position: 441-811
Cow position: chr6:47150035-47149646 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 155

Conread position: 441-811
Cow position: chr6:47573736-47574116 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 53, 31

Conread position: 442-745
Cow position: chr6:40759965-40760281 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 74, 167

Conread position: 443-811
Cow position: chr6:45736880-45736542 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 443-811
Cow position: chr6:50113626-50114006 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 448-807
Cow position: chr6:16674645-16675002 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 112, 15

Conread position: 449-809
Cow position: chr6:727678-727301 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 141

Conread position: 451-811
Cow position: chr6:38438550-38438932 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 455-792
Cow position: chr6:65892920-65892566 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 507-808
Cow position: chr6:49761482-49761787 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 511-809
Cow position: chr6:46633142-46633442 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 34

Conread position: 515-811
Cow position: chr6:452236-451937 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 515-811
Cow position: chr6:21711733-21712032 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 515-811
Cow position: chr6:23880029-23879730 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 519-808
Cow position: chr6:18987175-18987453 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 25

Conread position: 519-811
Cow position: chr6:224476-224180 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 246

Conread position: 519-811
Cow position: chr6:17556640-17556347 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 25

Conread position: 528-811
Cow position: chr6:28844616-28844341 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 18

Conread position: 537-811
Cow position: chr6:1834045-1834321 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 539-811
Cow position: chr6:6944888-6944622 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 80

Conread position: 542-811
Cow position: chr6:1796680-1796951 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 160

Conread position: 542-811
Cow position: chr6:18804005-18803733 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 78

Conread position: 542-811
Cow position: chr6:46764349-46764080 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 186

Conread position: 544-809
Cow position: chr6:62001284-62001020 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 20

Conread position: 544-810
Cow position: chr6:40813421-40813686 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 243

Conread position: 544-811
Cow position: chr6:2087578-2087849 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 181

Conread position: 544-811
Cow position: chr6:13591369-13591638 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 102, 130

Conread position: 544-811
Cow position: chr6:17049429-17049699 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 544-811
Cow position: chr6:19441262-19441536 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 128

Conread position: 544-811
Cow position: chr6:29085319-29085056 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 101, 151

Conread position: 546-808
Cow position: chr6:14897238-14897503 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 216

Conread position: 546-808
Cow position: chr6:39136560-39136827 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 546-808
Cow position: chr6:43797849-43797578 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 546-809
Cow position: chr6:11639141-11638882 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 94

Conread position: 546-809
Cow position: chr6:57856827-57857094 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 546-810
Cow position: chr6:28481394-28481653 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 40

Conread position: 546-811
Cow position: chr6:2186724-2186456 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 546-811
Cow position: chr6:2618508-2618240 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 546-811
Cow position: chr6:10598062-10598327 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 546-811
Cow position: chr6:10694771-10695048 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 546-811
Cow position: chr6:12926631-12926899 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 129

Conread position: 546-811
Cow position: chr6:16410118-16410381 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 546-811
Cow position: chr6:28171969-28172233 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 153

Conread position: 546-811
Cow position: chr6:34405359-34405627 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 546-811
Cow position: chr6:35704463-35704191 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 162

Conread position: 548-811
Cow position: chr6:6459174-6459434 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 131

Conread position: 550-811
Cow position: chr6:46284037-46283773 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 55

Conread position: 551-808
Cow position: chr6:13314966-13314713 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 191

Conread position: 552-807
Cow position: chr6:16624840-16625102 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 94, 149

Conread position: 552-811
Cow position: chr6:4274133-4274395 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 210

Conread position: 553-811
Cow position: chr6:24624073-24623817 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 106

Conread position: 554-803
Cow position: chr6:43585419-43585173 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 35

Conread position: 554-808
Cow position: chr6:27534737-27534469 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 554-811
Cow position: chr6:10681060-10681310 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 133

Conread position: 554-811
Cow position: chr6:15181231-15181483 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 21

Conread position: 555-809
Cow position: chr6:24126520-24126271 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 19

Conread position: 556-808
Cow position: chr6:42988732-42988482 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 126

Conread position: 556-811
Cow position: chr6:52557563-52557325 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 54

Conread position: 558-750
Cow position: chr6:28112986-28112791 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 43

Conread position: 558-809
Cow position: chr6:14264184-14263932 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 564-811
Cow position: chr6:25180106-25179859 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 148

Conread position: 565-811
Cow position: chr6:19718662-19718911 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 565-811
Cow position: chr6:55593147-55593396 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 568-811
Cow position: chr6:65909408-65909653 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 78, 38

Conread position: 572-809
Cow position: chr6:67098318-67098552 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 38

Conread position: 572-811
Cow position: chr6:29484064-29484304 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 27, 133

Conread position: 572-811
Cow position: chr6:58595322-58595083 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 74, 209

Conread position: 576-808
Cow position: chr6:62960991-62961225 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 47

Conread position: 577-811
Cow position: chr6:41531678-41531919 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 168

Conread position: 585-811
Cow position: chr6:17150077-17149841 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 61, 0

Conread position: 585-811
Cow position: chr6:56925829-56926059 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 588-788
Cow position: chr6:16221028-16220829 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 80

Conread position: 588-811
Cow position: chr6:43778808-43779020 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 58, 6

Conread position: 590-811
Cow position: chr6:29688967-29689182 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 91

Conread position: 591-811
Cow position: chr6:19044317-19044532 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 105

Conread position: 594-811
Cow position: chr6:21588090-21588310 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 599-811
Cow position: chr6:1263279-1263482 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 25

Conread position: 599-811
Cow position: chr6:48947544-48947331 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 47, 31

Conread position: 600-811
Cow position: chr6:55903201-55903415 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 601-800
Cow position: chr6:33300778-33300980 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 602-811
Cow position: chr6:4467751-4467949 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 48, 98

Conread position: 602-811
Cow position: chr6:6471819-6471610 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 99

Conread position: 602-811
Cow position: chr6:8754340-8754129 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 84

Conread position: 602-811
Cow position: chr6:45666813-45666604 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 66

Conread position: 602-811
Cow position: chr6:45792848-45793059 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 24

Conread position: 611-810
Cow position: chr6:12738591-12738792 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 616-811
Cow position: chr6:18963214-18963019 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 73

Conread position: 618-810
Cow position: chr6:54472515-54472321 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 88

Conread position: 624-811
Cow position: chr6:40251661-40251473 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 62

Conread position: 627-811
Cow position: chr6:12388315-12388136 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 67

Conread position: 633-811
Cow position: chr6:7215942-7216121 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 635-808
Cow position: chr6:1818616-1818440 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 637-811
Cow position: chr6:5096650-5096483 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 644-811
Cow position: chr6:2111241-2111074 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 16, 116

Conread position: 644-811
Cow position: chr6:17344358-17344525 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 40

Conread position: 644-811
Cow position: chr6:46225804-46225636 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 644-811
Cow position: chr6:57383574-57383742 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 659-811
Cow position: chr6:7448669-7448821 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 126
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 659-811
Cow position: chr6:12099688-12099830 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 659-811
Cow position: chr6:18912560-18912408 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 659-811
Cow position: chr6:20268138-20267988 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 659-811
Cow position: chr6:27887086-27887238 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 660-811
Cow position: chr6:44510265-44510413 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 664-790
Cow position: chr6:10605158-10605033 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 666-811
Cow position: chr6:50801457-50801314 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 55

Conread position: 671-801
Cow position: chr6:54887405-54887276 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 671-811
Cow position: chr6:1109193-1109334 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 677-811
Cow position: chr6:65860568-65860700 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 689-811
Cow position: chr6:3445837-3445715 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 695-811
Cow position: chr6:63041119-63041003 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 732-811
Cow position: chr6:10266880-10266801 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 72
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 733-809
Cow position: chr6:43790120-43790044 (view UCSC Genome Browser custom track)
Alignm length: 77
Alignm identity: 72
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 733-811
Cow position: chr6:1245673-1245595 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 74
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 734-811
Cow position: chr6:52696833-52696910 (view UCSC Genome Browser custom track)
Alignm length: 78
Alignm identity: 72
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 740-811
Cow position: chr6:61632388-61632459 (view UCSC Genome Browser custom track)
Alignm length: 72
Alignm identity: 70
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.