Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 1-798
Cow position: chr18:43130168-43129380 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 25-299
Cow position: chr18:36346341-36346615 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 46, 113

Conread position: 28-731
Cow position: chr18:36477875-36477149 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 212

Conread position: 28-800
Cow position: chr18:36649450-36648693 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 116

Conread position: 35-800
Cow position: chr18:40694301-40693527 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 264

Conread position: 36-797
Cow position: chr18:17944577-17943803 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 125

Conread position: 37-794
Cow position: chr18:35058053-35057320 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 32

Conread position: 38-236
Cow position: chr18:52656903-52656711 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-244
Cow position: chr18:45901895-45902095 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-244
Cow position: chr18:54071773-54071973 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-251
Cow position: chr18:24547811-24548018 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chr18:43539175-43538962 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-259
Cow position: chr18:41072578-41072355 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 9

Conread position: 38-284
Cow position: chr18:22591414-22591655 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr18:28086873-28086630 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-295
Cow position: chr18:6322450-6322197 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-299
Cow position: chr18:32019808-32020064 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-299
Cow position: chr18:37314668-37314924 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-315
Cow position: chr18:4556674-4556946 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr18:17927855-17927579 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 9

Conread position: 38-348
Cow position: chr18:27798094-27798396 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr18:5185333-5185643 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 34, 9

Conread position: 38-377
Cow position: chr18:34050906-34051238 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 9

Conread position: 38-404
Cow position: chr18:22396369-22396729 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-404
Cow position: chr18:33907500-33907859 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 9

Conread position: 38-411
Cow position: chr18:1611473-1611107 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-432
Cow position: chr18:23687838-23688226 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-439
Cow position: chr18:42421694-42422088 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-447
Cow position: chr18:26485453-26485052 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-447
Cow position: chr18:31309833-31309431 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-469
Cow position: chr18:11251324-11251748 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-471
Cow position: chr18:26295068-26295485 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 10

Conread position: 38-475
Cow position: chr18:22181395-22181826 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-475
Cow position: chr18:31202087-31201657 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-482
Cow position: chr18:30406309-30406742 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-515
Cow position: chr18:43075973-43075502 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-518
Cow position: chr18:25005870-25006343 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-650
Cow position: chr18:42425630-42425026 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-690
Cow position: chr18:33616364-33617014 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-709
Cow position: chr18:7649705-7649041 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 38-709
Cow position: chr18:26306327-26305661 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr18:51579727-51580399 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr18:55436076-55436748 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-798
Cow position: chr18:37733749-37732979 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr18:602408-603176 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr18:6732915-6733675 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr18:12270205-12269441 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 121

Conread position: 38-800
Cow position: chr18:16462597-16463358 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr18:26242387-26243170 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr18:29079795-29079025 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 39-789
Cow position: chr18:11779376-11778638 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 7

Conread position: 40-570
Cow position: chr18:24293570-24293045 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 40-570
Cow position: chr18:35637871-35637343 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 40-603
Cow position: chr18:25003166-25003712 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 127

Conread position: 40-615
Cow position: chr18:30248415-30248978 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 119

Conread position: 40-652
Cow position: chr18:27799821-27800436 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 122

Conread position: 40-657
Cow position: chr18:51712998-51713621 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 40-659
Cow position: chr18:43638459-43637828 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 290

Conread position: 40-668
Cow position: chr18:27833368-27833998 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-711
Cow position: chr18:16641494-16640834 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 55

Conread position: 40-772
Cow position: chr18:42608617-42609360 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 40-775
Cow position: chr18:3190802-3190057 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-794
Cow position: chr18:13508018-13508769 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 40-794
Cow position: chr18:39002084-39002816 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 198

Conread position: 40-794
Cow position: chr18:45981551-45980796 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 40-798
Cow position: chr18:43473635-43472888 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 120

Conread position: 40-799
Cow position: chr18:43431056-43430295 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:5537028-5536260 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 40-800
Cow position: chr18:10292786-10292019 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr18:16094934-16094173 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 40-800
Cow position: chr18:16172560-16173325 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:17324421-17323668 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-800
Cow position: chr18:18214964-18215725 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:19356581-19355801 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chr18:19462338-19461568 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:23658848-23659606 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 40-800
Cow position: chr18:23803069-23802311 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 40-800
Cow position: chr18:24036793-24037558 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:25924434-25923674 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chr18:27540480-27539720 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr18:27990812-27990045 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 25

Conread position: 40-800
Cow position: chr18:28968231-28969001 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:30843830-30844616 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 276

Conread position: 40-800
Cow position: chr18:31139807-31139040 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:36512686-36511922 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 40-800
Cow position: chr18:40078154-40078881 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 494
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 222, 48

Conread position: 40-800
Cow position: chr18:40196169-40195401 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr18:51458787-51459553 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:51601609-51602377 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr18:52575161-52574403 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr18:52629200-52629970 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr18:54033753-54033006 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-800
Cow position: chr18:55555308-55554539 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 42-767
Cow position: chr18:90170-89467 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 42-800
Cow position: chr18:22790364-22791134 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 42-800
Cow position: chr18:33272654-33271925 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 123

Conread position: 42-800
Cow position: chr18:33523288-33522515 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 132

Conread position: 42-800
Cow position: chr18:35443321-35444080 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 124

Conread position: 44-794
Cow position: chr18:30876218-30876971 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 276

Conread position: 44-799
Cow position: chr18:38157498-38158253 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 44-800
Cow position: chr18:25355569-25354805 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 128

Conread position: 45-800
Cow position: chr18:29862556-29863316 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 121

Conread position: 49-800
Cow position: chr18:50092398-50093156 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 114

Conread position: 49-800
Cow position: chr18:51485637-51484879 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 50-636
Cow position: chr18:51679172-51679745 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 50-800
Cow position: chr18:26846119-26845388 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 50-800
Cow position: chr18:42079951-42080728 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 288

Conread position: 52-800
Cow position: chr18:49781243-49781991 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 179

Conread position: 53-631
Cow position: chr18:23044515-23043938 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 163

Conread position: 53-708
Cow position: chr18:41958577-41957915 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 440
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 116

Conread position: 54-800
Cow position: chr18:1144516-1145256 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 113

Conread position: 54-800
Cow position: chr18:17334698-17335452 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 54-800
Cow position: chr18:30231525-30232270 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 24

Conread position: 56-626
Cow position: chr18:51691773-51692348 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 118

Conread position: 63-800
Cow position: chr18:14127256-14127998 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 63-800
Cow position: chr18:48548842-48548128 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 60

Conread position: 71-800
Cow position: chr18:16390200-16390918 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 227

Conread position: 71-800
Cow position: chr18:50789750-50789013 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 112

Conread position: 73-639
Cow position: chr18:1494971-1494408 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 81-662
Cow position: chr18:9365558-9364985 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 91

Conread position: 89-717
Cow position: chr18:54058832-54059459 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 219

Conread position: 90-787
Cow position: chr18:33497967-33498669 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 14

Conread position: 96-711
Cow position: chr18:39494763-39494176 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 107

Conread position: 105-645
Cow position: chr18:14480111-14479585 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 106-800
Cow position: chr18:24620403-24619717 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 58

Conread position: 123-800
Cow position: chr18:36770566-36771244 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 46

Conread position: 127-794
Cow position: chr18:2852818-2853501 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 45

Conread position: 129-798
Cow position: chr18:21304478-21303791 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 112

Conread position: 151-766
Cow position: chr18:52656746-52656117 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 13

Conread position: 156-800
Cow position: chr18:38341601-38342223 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 142

Conread position: 166-695
Cow position: chr18:3892203-3892727 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 331
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 18

Conread position: 166-800
Cow position: chr18:33407227-33406596 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 144

Conread position: 171-794
Cow position: chr18:33608163-33607529 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 131

Conread position: 172-766
Cow position: chr18:36133682-36133106 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 173-770
Cow position: chr18:36121929-36122544 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 32

Conread position: 173-800
Cow position: chr18:40484926-40484288 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 67

Conread position: 190-800
Cow position: chr18:47745651-47745041 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 70

Conread position: 205-787
Cow position: chr18:42242443-42243042 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 108

Conread position: 205-800
Cow position: chr18:29797187-29797797 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 105

Conread position: 215-800
Cow position: chr18:10113876-10113303 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 105

Conread position: 215-800
Cow position: chr18:37509845-37509256 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 216-778
Cow position: chr18:33505128-33505691 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 366
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 136, 23

Conread position: 216-800
Cow position: chr18:30607582-30606984 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 86

Conread position: 217-709
Cow position: chr18:3081074-3081561 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 37

Conread position: 219-800
Cow position: chr18:14419861-14419265 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 221-800
Cow position: chr18:26335280-26335869 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 110

Conread position: 222-768
Cow position: chr18:20151475-20150929 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 82

Conread position: 224-800
Cow position: chr18:51690676-51690085 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 372

Conread position: 231-787
Cow position: chr18:52457672-52458233 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 365
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 93

Conread position: 235-796
Cow position: chr18:40341980-40342556 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 242-800
Cow position: chr18:28800989-28801556 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 243-800
Cow position: chr18:6103561-6104114 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 89

Conread position: 252-794
Cow position: chr18:15688830-15688317 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 25

Conread position: 256-800
Cow position: chr18:54047724-54047167 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 45

Conread position: 280-570
Cow position: chr18:27466994-27466701 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 41

Conread position: 281-800
Cow position: chr18:19310968-19310455 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 283-800
Cow position: chr18:41837272-41837802 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 291-798
Cow position: chr18:26844291-26844791 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 29

Conread position: 325-569
Cow position: chr18:43466575-43466326 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 16

Conread position: 325-798
Cow position: chr18:21175587-21175100 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 256

Conread position: 330-794
Cow position: chr18:12241583-12241136 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 331-630
Cow position: chr18:15324297-15324600 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 40, 19

Conread position: 335-800
Cow position: chr18:47985636-47985185 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 337-712
Cow position: chr18:4949926-4949542 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 261

Conread position: 337-784
Cow position: chr18:55137365-55137839 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 309
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 27

Conread position: 340-800
Cow position: chr18:37692520-37692999 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 241

Conread position: 350-800
Cow position: chr18:28927853-28928307 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 157

Conread position: 355-798
Cow position: chr18:4978121-4978567 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 123

Conread position: 362-670
Cow position: chr18:51487169-51487482 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 55

Conread position: 366-800
Cow position: chr18:36208651-36209086 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 154

Conread position: 367-800
Cow position: chr18:11870223-11869775 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 229

Conread position: 374-800
Cow position: chr18:44261783-44261356 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 41

Conread position: 394-800
Cow position: chr18:902730-902317 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 273
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 52

Conread position: 397-769
Cow position: chr18:46869847-46869475 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 114

Conread position: 398-708
Cow position: chr18:25200463-25200152 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 100, 112

Conread position: 403-794
Cow position: chr18:1022328-1022725 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 122

Conread position: 418-788
Cow position: chr18:51663845-51663475 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 221, 44

Conread position: 418-800
Cow position: chr18:970442-970063 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 37

Conread position: 419-663
Cow position: chr18:6425314-6425551 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 209, 99

Conread position: 421-798
Cow position: chr18:23701121-23701508 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 158

Conread position: 421-800
Cow position: chr18:10221008-10221396 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 160

Conread position: 431-713
Cow position: chr18:15485535-15485818 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 74

Conread position: 435-800
Cow position: chr18:32245659-32246028 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 91, 12

Conread position: 437-800
Cow position: chr18:23688838-23688460 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 142

Conread position: 445-683
Cow position: chr18:31563817-31564058 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 18, 132

Conread position: 450-709
Cow position: chr18:42466699-42466956 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 48

Conread position: 454-800
Cow position: chr18:16025005-16025371 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 128

Conread position: 465-799
Cow position: chr18:43284681-43285016 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 113

Conread position: 491-799
Cow position: chr18:16871847-16871550 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 155, 47

Conread position: 493-713
Cow position: chr18:24219092-24219308 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 149, 19

Conread position: 494-800
Cow position: chr18:29947055-29946746 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 10

Conread position: 499-786
Cow position: chr18:7930988-7931276 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 6

Conread position: 522-797
Cow position: chr18:28084623-28084338 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 14, 52

Conread position: 522-800
Cow position: chr18:32164357-32164643 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 67

Conread position: 522-800
Cow position: chr18:51654169-51653888 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 67

Conread position: 523-788
Cow position: chr18:33851104-33850830 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 523-795
Cow position: chr18:35293688-35293408 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 49

Conread position: 523-798
Cow position: chr18:36187820-36188100 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 51

Conread position: 523-800
Cow position: chr18:30035157-30035441 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 63

Conread position: 523-800
Cow position: chr18:33894104-33893833 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 51

Conread position: 523-800
Cow position: chr18:48501052-48500789 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 51

Conread position: 526-698
Cow position: chr18:21199532-21199705 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 47

Conread position: 533-800
Cow position: chr18:23716099-23716372 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 7, 40

Conread position: 533-800
Cow position: chr18:36776839-36776565 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 100, 39

Conread position: 545-787
Cow position: chr18:52479601-52479360 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 29

Conread position: 549-800
Cow position: chr18:12200994-12201243 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 166, 23

Conread position: 594-786
Cow position: chr18:56483161-56483361 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 26

Conread position: 605-800
Cow position: chr18:37582964-37583169 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 91

Conread position: 617-798
Cow position: chr18:14479564-14479374 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 43

Conread position: 626-800
Cow position: chr18:14965757-14965573 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 639-799
Cow position: chr18:32859565-32859733 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.