Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 1-800
Cow position: chr19:2260367-2261149 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 28

Conread position: 28-357
Cow position: chr19:35064470-35064795 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 39

Conread position: 28-710
Cow position: chr19:42274139-42274828 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 220

Conread position: 28-793
Cow position: chr19:7492155-7491396 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 140

Conread position: 28-798
Cow position: chr19:28912598-28911827 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 28-800
Cow position: chr19:34986153-34985383 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 43

Conread position: 30-210
Cow position: chr19:10112549-10112368 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 119

Conread position: 33-713
Cow position: chr19:48218294-48218981 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 34-647
Cow position: chr19:29070979-29071581 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 34-795
Cow position: chr19:38396548-38397315 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 35-800
Cow position: chr19:46872960-46873731 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 36-234
Cow position: chr19:37654549-37654352 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 163, 0

Conread position: 36-570
Cow position: chr19:12613791-12614318 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 130

Conread position: 37-800
Cow position: chr19:42647331-42648090 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 35

Conread position: 38-170
Cow position: chr19:10752743-10752875 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-231
Cow position: chr19:28793917-28794104 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr19:46815458-46815235 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr19:49595098-49595320 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 40, 9

Conread position: 38-286
Cow position: chr19:33304351-33304108 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-292
Cow position: chr19:13211630-13211378 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-313
Cow position: chr19:18076828-18077098 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr19:32164479-32164751 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-348
Cow position: chr19:39959977-39960279 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr19:3106268-3106579 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr19:5731418-5731108 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 9

Conread position: 38-371
Cow position: chr19:888737-889061 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-394
Cow position: chr19:26979165-26979514 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-417
Cow position: chr19:3473242-3472870 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-428
Cow position: chr19:8010-7625 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-431
Cow position: chr19:434143-434526 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-431
Cow position: chr19:31783994-31783617 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-438
Cow position: chr19:4460681-4461072 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-448
Cow position: chr19:235680-236083 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-466
Cow position: chr19:42609445-42609022 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-471
Cow position: chr19:42156639-42156213 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-502
Cow position: chr19:30540329-30540786 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-509
Cow position: chr19:24358491-24358970 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-531
Cow position: chr19:23462888-23463371 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-541
Cow position: chr19:41223599-41224097 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr19:20108442-20107915 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr19:33932409-33932935 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 136

Conread position: 38-622
Cow position: chr19:35362495-35363076 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr19:35082293-35081703 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-679
Cow position: chr19:1168861-1169496 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-687
Cow position: chr19:5679587-5680235 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr19:26518272-26518939 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr19:30514978-30515650 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr19:52147378-52148034 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr19:54541929-54542600 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-778
Cow position: chr19:8205955-8206693 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr19:1152724-1151956 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 210

Conread position: 38-800
Cow position: chr19:1580848-1581615 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 38-800
Cow position: chr19:36352333-36351563 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr19:39181477-39182246 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 39-800
Cow position: chr19:29367593-29366822 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 127

Conread position: 40-195
Cow position: chr19:27104482-27104331 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 40-624
Cow position: chr19:158135-158710 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 31

Conread position: 40-631
Cow position: chr19:30518785-30518207 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 40-631
Cow position: chr19:32457374-32456787 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 40-634
Cow position: chr19:2821311-2820727 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 268

Conread position: 40-652
Cow position: chr19:15068261-15068861 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-682
Cow position: chr19:42240559-42241200 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 50

Conread position: 40-709
Cow position: chr19:19500629-19501297 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-709
Cow position: chr19:20433179-20433844 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-711
Cow position: chr19:30237767-30237102 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 110

Conread position: 40-794
Cow position: chr19:42400-41633 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 40-794
Cow position: chr19:37843732-37844480 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-794
Cow position: chr19:40848426-40849189 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chr19:129800-130550 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr19:208560-207794 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 40-800
Cow position: chr19:255059-255831 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 129

Conread position: 40-800
Cow position: chr19:345457-344680 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 40-800
Cow position: chr19:777580-776807 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chr19:3407244-3406474 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr19:4448266-4447508 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 25

Conread position: 40-800
Cow position: chr19:10614289-10613522 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr19:12208857-12209639 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 40-800
Cow position: chr19:12652939-12652164 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr19:23488818-23488055 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr19:24735201-24734437 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr19:29625099-29624330 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 40-800
Cow position: chr19:33118660-33119430 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr19:40790300-40791062 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-800
Cow position: chr19:43149644-43148875 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 40-800
Cow position: chr19:48534783-48534022 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 40-800
Cow position: chr19:55163593-55164363 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr19:55844058-55843298 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 41-787
Cow position: chr19:5043641-5044377 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 41-791
Cow position: chr19:33625632-33624875 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 55

Conread position: 41-800
Cow position: chr19:164087-164838 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 99

Conread position: 42-650
Cow position: chr19:15766834-15766237 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 82

Conread position: 42-794
Cow position: chr19:7473110-7472360 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 42-800
Cow position: chr19:39602409-39603176 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 44-710
Cow position: chr19:39751213-39750568 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 138

Conread position: 44-720
Cow position: chr19:50832846-50833521 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 81

Conread position: 44-800
Cow position: chr19:176551-175762 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 269

Conread position: 44-800
Cow position: chr19:930878-930113 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 48-800
Cow position: chr19:2589238-2588483 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 48-800
Cow position: chr19:5733539-5732789 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 92

Conread position: 51-570
Cow position: chr19:19928075-19928600 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 53-798
Cow position: chr19:28370554-28369817 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 54-713
Cow position: chr19:29627649-29628298 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 69-800
Cow position: chr19:9704153-9704892 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 253

Conread position: 72-800
Cow position: chr19:55217838-55217099 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 249

Conread position: 73-630
Cow position: chr19:30565582-30565024 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 65

Conread position: 81-711
Cow position: chr19:21201271-21200652 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 24

Conread position: 89-798
Cow position: chr19:30562304-30561586 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 233

Conread position: 97-800
Cow position: chr19:22513246-22512539 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 67

Conread position: 101-656
Cow position: chr19:7053656-7054200 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 67

Conread position: 130-800
Cow position: chr19:30937241-30937936 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 91

Conread position: 140-706
Cow position: chr19:14581241-14580676 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 91

Conread position: 141-800
Cow position: chr19:35982722-35982065 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 181

Conread position: 165-799
Cow position: chr19:35381155-35381779 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 12

Conread position: 173-800
Cow position: chr19:10196344-10195707 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 179-793
Cow position: chr19:40883603-40884223 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 60

Conread position: 192-711
Cow position: chr19:12777156-12776648 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 51

Conread position: 196-800
Cow position: chr19:28515914-28516531 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 108

Conread position: 210-800
Cow position: chr19:6614966-6614373 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 386
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 89

Conread position: 211-678
Cow position: chr19:3032442-3032913 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 108

Conread position: 214-800
Cow position: chr19:33877310-33876710 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 215-632
Cow position: chr19:29365417-29365008 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 215-800
Cow position: chr19:28597263-28596670 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 95

Conread position: 215-800
Cow position: chr19:28794442-28795031 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 95

Conread position: 217-630
Cow position: chr19:25095198-25094777 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 91

Conread position: 223-800
Cow position: chr19:40248664-40248071 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 100

Conread position: 228-800
Cow position: chr19:42580448-42581021 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 75

Conread position: 239-800
Cow position: chr19:3086658-3086087 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 71

Conread position: 239-800
Cow position: chr19:40015724-40016292 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 71

Conread position: 239-800
Cow position: chr19:52465422-52465986 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 84

Conread position: 240-799
Cow position: chr19:52834867-52834292 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 84

Conread position: 241-709
Cow position: chr19:35835455-35835002 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 302
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 85

Conread position: 246-798
Cow position: chr19:33945428-33944863 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 246-800
Cow position: chr19:44839337-44839875 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 250-616
Cow position: chr19:31762280-31762659 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 80

Conread position: 252-800
Cow position: chr19:41204371-41204933 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 50

Conread position: 271-795
Cow position: chr19:12600868-12601400 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 41

Conread position: 276-631
Cow position: chr19:12551271-12551622 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 294-800
Cow position: chr19:48626868-48626353 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 306-800
Cow position: chr19:14158206-14157708 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 315-800
Cow position: chr19:16316426-16316913 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 5

Conread position: 326-711
Cow position: chr19:15797204-15796816 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 250

Conread position: 330-570
Cow position: chr19:32618098-32617860 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 98

Conread position: 330-800
Cow position: chr19:9099399-9098906 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 331-717
Cow position: chr19:44216070-44216464 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 251

Conread position: 332-800
Cow position: chr19:373919-374420 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 335
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 27

Conread position: 335-800
Cow position: chr19:7065431-7064977 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 337-800
Cow position: chr19:3177232-3176755 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 339-798
Cow position: chr19:35843617-35843150 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 72

Conread position: 341-626
Cow position: chr19:9542934-9543227 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 242

Conread position: 342-798
Cow position: chr19:17883703-17883261 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 306
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 31, 45

Conread position: 342-800
Cow position: chr19:20671838-20672301 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 344-795
Cow position: chr19:35782627-35783099 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 346-708
Cow position: chr19:39077197-39076841 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 194

Conread position: 363-800
Cow position: chr19:27612747-27613209 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 101

Conread position: 364-800
Cow position: chr19:9098182-9098634 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 100

Conread position: 364-800
Cow position: chr19:29394088-29393636 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 233

Conread position: 364-800
Cow position: chr19:35781622-35781170 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 231

Conread position: 372-800
Cow position: chr19:30037170-30037613 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 224

Conread position: 376-800
Cow position: chr19:51504801-51504382 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 146, 200

Conread position: 379-799
Cow position: chr19:20612064-20611629 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 200

Conread position: 392-800
Cow position: chr19:32140714-32140291 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 70

Conread position: 393-796
Cow position: chr19:32952537-32952119 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 111

Conread position: 393-800
Cow position: chr19:5902744-5902321 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 204

Conread position: 394-682
Cow position: chr19:35171188-35171470 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 71

Conread position: 395-791
Cow position: chr19:46821561-46821157 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 41

Conread position: 405-788
Cow position: chr19:39697178-39696790 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 72

Conread position: 406-652
Cow position: chr19:736045-736297 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 173

Conread position: 410-800
Cow position: chr19:7078955-7078550 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 186

Conread position: 413-800
Cow position: chr19:402920-402533 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 78, 140

Conread position: 416-800
Cow position: chr19:4389267-4388877 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 163

Conread position: 421-570
Cow position: chr19:38390044-38389889 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 45

Conread position: 421-743
Cow position: chr19:30473460-30473787 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 421-775
Cow position: chr19:743034-743388 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 96, 35

Conread position: 421-800
Cow position: chr19:435648-436044 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 158

Conread position: 421-800
Cow position: chr19:2269616-2270007 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 424-800
Cow position: chr19:6784-6398 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 39

Conread position: 430-717
Cow position: chr19:3085003-3085285 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 141, 23

Conread position: 431-800
Cow position: chr19:20403957-20403578 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 144

Conread position: 436-800
Cow position: chr19:19389507-19389128 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 160

Conread position: 441-800
Cow position: chr19:33528515-33528141 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 155

Conread position: 447-794
Cow position: chr19:2019103-2019463 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 138

Conread position: 448-717
Cow position: chr19:39726457-39726192 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 71, 87

Conread position: 454-798
Cow position: chr19:4599665-4599312 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 128

Conread position: 455-800
Cow position: chr19:39394855-39394495 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 124

Conread position: 462-800
Cow position: chr19:405795-405441 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 64, 119

Conread position: 465-788
Cow position: chr19:3221747-3221418 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 39

Conread position: 496-642
Cow position: chr19:39665529-39665671 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 496-772
Cow position: chr19:51775318-51775608 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 80

Conread position: 521-800
Cow position: chr19:1293931-1293644 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 123, 67

Conread position: 522-794
Cow position: chr19:799946-799677 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 50

Conread position: 522-800
Cow position: chr19:14156528-14156809 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 50

Conread position: 523-799
Cow position: chr19:42867044-42866760 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 49

Conread position: 523-800
Cow position: chr19:1663646-1663366 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 192, 49

Conread position: 523-800
Cow position: chr19:37653741-37653469 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 119, 60

Conread position: 523-800
Cow position: chr19:45464712-45464428 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 67

Conread position: 524-800
Cow position: chr19:7345597-7345328 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 50

Conread position: 525-661
Cow position: chr19:42725588-42725458 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 526-788
Cow position: chr19:15720311-15720567 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 61

Conread position: 526-800
Cow position: chr19:43511186-43510903 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 46

Conread position: 534-798
Cow position: chr19:36395754-36395482 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 586-776
Cow position: chr19:50020444-50020644 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 118

Conread position: 586-800
Cow position: chr19:444419-444641 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 586-800
Cow position: chr19:48478081-48477863 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 122

Conread position: 591-794
Cow position: chr19:9118324-9118110 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 594-794
Cow position: chr19:39339559-39339768 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 119, 0

Conread position: 595-800
Cow position: chr19:55378403-55378189 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 173

Conread position: 602-800
Cow position: chr19:22391720-22391511 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 605-800
Cow position: chr19:5026692-5026898 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 609-794
Cow position: chr19:267600-267406 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 647-800
Cow position: chr19:730538-730697 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.