Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 20-188
Cow position: chr21:38628206-38628036 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 23-356
Cow position: chr21:19237538-19237214 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 23-791
Cow position: chr21:44861433-44862215 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 26-800
Cow position: chr21:20910290-20911058 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 124

Conread position: 28-370
Cow position: chr21:28944589-28944940 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 9

Conread position: 28-784
Cow position: chr21:12801961-12802725 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 146

Conread position: 28-787
Cow position: chr21:3047483-3046718 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 146

Conread position: 28-798
Cow position: chr21:21000231-21001015 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 215

Conread position: 29-800
Cow position: chr21:45781590-45782358 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 61

Conread position: 30-778
Cow position: chr21:1058624-1057851 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 132

Conread position: 30-800
Cow position: chr21:33316220-33316999 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 134

Conread position: 34-713
Cow position: chr21:28210998-28210326 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 140

Conread position: 34-785
Cow position: chr21:25813287-25814022 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 34-794
Cow position: chr21:3765627-3766397 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 35-795
Cow position: chr21:9862809-9863561 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 147

Conread position: 36-798
Cow position: chr21:471442-470658 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 407

Conread position: 37-800
Cow position: chr21:30354981-30354226 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 38-170
Cow position: chr21:2983984-2984115 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-248
Cow position: chr21:2709753-2709957 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 38-253
Cow position: chr21:23900000-23900208 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-255
Cow position: chr21:16696177-16695967 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 9

Conread position: 38-259
Cow position: chr21:28914556-28914768 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-265
Cow position: chr21:1179129-1179351 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr21:17539541-17539318 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr21:39224811-39225034 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-273
Cow position: chr21:39700269-39700499 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-280
Cow position: chr21:17411700-17411937 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr21:27036585-27036342 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr21:33245354-33245594 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-292
Cow position: chr21:23192711-23192961 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 9

Conread position: 38-319
Cow position: chr21:4473213-4473487 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr21:11353629-11353354 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-348
Cow position: chr21:38848663-38848965 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 9

Conread position: 38-361
Cow position: chr21:29955027-29954712 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-362
Cow position: chr21:20370502-20370186 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-377
Cow position: chr21:22100063-22100395 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 9

Conread position: 38-391
Cow position: chr21:42540413-42540764 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-399
Cow position: chr21:21910162-21909808 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-422
Cow position: chr21:167838-168212 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-428
Cow position: chr21:17144955-17144570 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-434
Cow position: chr21:18601467-18601090 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 9

Conread position: 38-494
Cow position: chr21:10075129-10075576 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-531
Cow position: chr21:30570943-30571429 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-531
Cow position: chr21:40479398-40478912 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-541
Cow position: chr21:48282-47782 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-551
Cow position: chr21:25738070-25738567 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-568
Cow position: chr21:7666249-7666786 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr21:7525254-7524722 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr21:10436976-10436459 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-570
Cow position: chr21:11292845-11292311 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-572
Cow position: chr21:19050680-19051213 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-611
Cow position: chr21:21103855-21103285 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-622
Cow position: chr21:452011-451433 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-657
Cow position: chr21:7038056-7038674 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-677
Cow position: chr21:39486138-39486774 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-687
Cow position: chr21:34181802-34181155 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-709
Cow position: chr21:3496370-3497039 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-709
Cow position: chr21:44761549-44762213 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr21:16575310-16575982 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr21:26628904-26628233 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-712
Cow position: chr21:18574651-18573987 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-787
Cow position: chr21:9209443-9208693 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-794
Cow position: chr21:4585543-4586306 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 38-799
Cow position: chr21:81877-81115 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr21:2514981-2514218 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr21:2877705-2878470 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr21:6623950-6623181 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 28

Conread position: 38-800
Cow position: chr21:6764895-6765658 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr21:7047050-7047813 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr21:10854395-10853632 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 38-800
Cow position: chr21:21027606-21026841 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 38-800
Cow position: chr21:25598801-25598040 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr21:26399648-26400397 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr21:27288113-27287346 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr21:27619383-27620133 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr21:33709363-33710132 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 39-788
Cow position: chr21:15584595-15585328 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 30

Conread position: 39-800
Cow position: chr21:4897845-4898597 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 127

Conread position: 40-540
Cow position: chr21:22856984-22856494 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 46

Conread position: 40-611
Cow position: chr21:29214349-29214917 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-615
Cow position: chr21:37517558-37518132 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-704
Cow position: chr21:13110990-13111650 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-709
Cow position: chr21:21216334-21217007 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-710
Cow position: chr21:38900580-38899920 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 40-755
Cow position: chr21:13089675-13090369 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 40-778
Cow position: chr21:7156516-7155774 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 84

Conread position: 40-778
Cow position: chr21:36892095-36892843 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-793
Cow position: chr21:4732410-4733157 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-794
Cow position: chr21:22718974-22719724 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 40-794
Cow position: chr21:30594945-30595717 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 40-798
Cow position: chr21:150283-149516 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-798
Cow position: chr21:19350725-19351492 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-798
Cow position: chr21:30965805-30966574 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:1196674-1195905 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:2904655-2905422 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chr21:3782907-3782140 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:5021275-5020513 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chr21:5641701-5642469 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr21:8070974-8071730 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 32

Conread position: 40-800
Cow position: chr21:10571407-10570654 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:11510073-11509308 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr21:12153940-12153190 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 134

Conread position: 40-800
Cow position: chr21:13300959-13300195 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 134

Conread position: 40-800
Cow position: chr21:16278518-16277769 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 40-800
Cow position: chr21:19626573-19627341 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:22856026-22855280 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 84

Conread position: 40-800
Cow position: chr21:23329205-23329976 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:23801314-23802064 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 31

Conread position: 40-800
Cow position: chr21:26756588-26757356 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:27147417-27148185 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr21:27376256-27375473 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:27607556-27608333 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:29424196-29423430 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 127

Conread position: 40-800
Cow position: chr21:33729240-33728475 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 119

Conread position: 40-800
Cow position: chr21:33831838-33832612 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 133

Conread position: 40-800
Cow position: chr21:34254475-34255211 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 112

Conread position: 40-800
Cow position: chr21:34685157-34684416 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 40-800
Cow position: chr21:34899547-34900307 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:36163156-36163922 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 119

Conread position: 40-800
Cow position: chr21:37299272-37298507 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 40-800
Cow position: chr21:37924320-37923554 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr21:41795587-41796354 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr21:42917930-42917160 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-800
Cow position: chr21:47649474-47648707 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 40-800
Cow position: chr21:47978404-47977634 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chr21:48531317-48530535 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 41-718
Cow position: chr21:45852-45161 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 41-783
Cow position: chr21:16889708-16890454 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 41-800
Cow position: chr21:1765396-1766146 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 129

Conread position: 41-800
Cow position: chr21:11143714-11144483 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 41-800
Cow position: chr21:26875727-26874959 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 42-791
Cow position: chr21:15545560-15546312 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 97

Conread position: 42-800
Cow position: chr21:31512136-31512903 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 104

Conread position: 44-793
Cow position: chr21:13735029-13735787 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-794
Cow position: chr21:4558942-4559697 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 44-800
Cow position: chr21:28477428-28476669 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 45-711
Cow position: chr21:4541067-4541713 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 47-800
Cow position: chr21:13303329-13302573 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 98

Conread position: 50-711
Cow position: chr21:39507844-39508504 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 38

Conread position: 50-786
Cow position: chr21:18818533-18819255 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 44

Conread position: 59-570
Cow position: chr21:2367128-2366630 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 86

Conread position: 59-800
Cow position: chr21:23341770-23341018 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 116

Conread position: 62-796
Cow position: chr21:44804475-44805196 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 139

Conread position: 63-791
Cow position: chr21:29253099-29253817 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 108

Conread position: 63-800
Cow position: chr21:48291246-48291984 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 150

Conread position: 66-711
Cow position: chr21:17208274-17207643 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 71-570
Cow position: chr21:26744183-26744680 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 93

Conread position: 72-767
Cow position: chr21:28989392-28988692 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 224

Conread position: 81-570
Cow position: chr21:28617366-28616891 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 91

Conread position: 81-794
Cow position: chr21:2293098-2293809 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 57

Conread position: 81-800
Cow position: chr21:48262899-48262183 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 96

Conread position: 90-798
Cow position: chr21:4098636-4097944 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 52

Conread position: 95-791
Cow position: chr21:38449932-38450612 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 77

Conread position: 96-800
Cow position: chr21:34141668-34142362 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 91

Conread position: 97-800
Cow position: chr21:4812256-4812971 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 75

Conread position: 105-650
Cow position: chr21:33350441-33349900 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 66

Conread position: 125-800
Cow position: chr21:29664947-29665604 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 129-800
Cow position: chr21:2767788-2768476 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 145-800
Cow position: chr21:21919522-21918859 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 79

Conread position: 173-800
Cow position: chr21:4718811-4719453 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 173-800
Cow position: chr21:33257566-33256923 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 133

Conread position: 173-800
Cow position: chr21:39469756-39470397 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 180-793
Cow position: chr21:5009471-5010097 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 150

Conread position: 181-800
Cow position: chr21:2537179-2537790 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 149

Conread position: 182-800
Cow position: chr21:32238338-32237706 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 120

Conread position: 183-800
Cow position: chr21:27065602-27066232 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 119

Conread position: 184-800
Cow position: chr21:18285796-18285173 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 195-800
Cow position: chr21:43403452-43404070 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 210-800
Cow position: chr21:29500503-29499905 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 92

Conread position: 215-800
Cow position: chr21:33964776-33965352 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 215-800
Cow position: chr21:40267472-40268043 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 87

Conread position: 216-800
Cow position: chr21:3253594-3252990 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 109

Conread position: 217-795
Cow position: chr21:78073-78660 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 218-800
Cow position: chr21:39418035-39417444 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 93

Conread position: 220-602
Cow position: chr21:16270056-16270431 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 21

Conread position: 221-794
Cow position: chr21:13315420-13314823 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 228-675
Cow position: chr21:743757-744194 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 103

Conread position: 231-800
Cow position: chr21:47168911-47168327 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 246-800
Cow position: chr21:4035362-4035895 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 249-800
Cow position: chr21:30627156-30627712 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 250-800
Cow position: chr21:28915046-28915608 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 250-800
Cow position: chr21:36505911-36506471 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 262-800
Cow position: chr21:33933996-33934538 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 263-800
Cow position: chr21:26633313-26633862 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 38

Conread position: 264-800
Cow position: chr21:35575721-35576237 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 45

Conread position: 281-799
Cow position: chr21:36376879-36376358 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 281-800
Cow position: chr21:36534315-36534841 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 290-798
Cow position: chr21:4192182-4191663 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 352
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 76, 33

Conread position: 302-800
Cow position: chr21:28598443-28597959 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 27

Conread position: 306-800
Cow position: chr21:21940702-21941190 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 12

Conread position: 307-791
Cow position: chr21:2420066-2419573 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 22

Conread position: 329-616
Cow position: chr21:12810050-12810331 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 30

Conread position: 331-668
Cow position: chr21:39764366-39764032 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 9

Conread position: 331-800
Cow position: chr21:30298331-30297846 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 263

Conread position: 331-800
Cow position: chr21:48273346-48273830 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 265

Conread position: 333-611
Cow position: chr21:33947557-33947834 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 337-788
Cow position: chr21:9010259-9010729 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 245

Conread position: 337-800
Cow position: chr21:46830719-46831199 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 251

Conread position: 345-770
Cow position: chr21:48196277-48195850 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 345-800
Cow position: chr21:22464027-22463558 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 127

Conread position: 348-629
Cow position: chr21:29015635-29015917 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 228

Conread position: 351-800
Cow position: chr21:648847-649312 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 351-800
Cow position: chr21:32773767-32773302 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 246

Conread position: 353-631
Cow position: chr21:28872628-28872356 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 168, 108

Conread position: 354-613
Cow position: chr21:42542883-42543151 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 224

Conread position: 355-765
Cow position: chr21:16768296-16768711 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 224

Conread position: 359-777
Cow position: chr21:48234495-48234925 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 94

Conread position: 359-800
Cow position: chr21:13199742-13199307 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 362-703
Cow position: chr21:42858427-42858768 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 82

Conread position: 372-787
Cow position: chr21:18786705-18787129 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 13

Conread position: 372-800
Cow position: chr21:33983463-33983908 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 209

Conread position: 373-609
Cow position: chr21:30894494-30894254 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 103

Conread position: 374-697
Cow position: chr21:29213654-29213342 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 7

Conread position: 374-708
Cow position: chr21:21411797-21412121 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 14

Conread position: 377-800
Cow position: chr21:9896149-9895729 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 388-713
Cow position: chr21:39074104-39074426 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 259, 184

Conread position: 391-800
Cow position: chr21:49655394-49655816 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 393-792
Cow position: chr21:20243813-20244225 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 85

Conread position: 396-791
Cow position: chr21:27342626-27343022 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 107

Conread position: 396-800
Cow position: chr21:46973960-46974363 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 11

Conread position: 403-800
Cow position: chr21:42460295-42460690 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 101

Conread position: 408-800
Cow position: chr21:38865838-38866245 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 188

Conread position: 409-800
Cow position: chr21:4722419-4722024 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 51, 55

Conread position: 418-800
Cow position: chr21:6965709-6966105 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 44

Conread position: 421-708
Cow position: chr21:20235975-20236266 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 66

Conread position: 421-799
Cow position: chr21:23500914-23501307 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 424-800
Cow position: chr21:20577645-20578022 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 49

Conread position: 424-800
Cow position: chr21:31276095-31275711 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 19

Conread position: 433-798
Cow position: chr21:44219426-44219048 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 135

Conread position: 434-710
Cow position: chr21:18979417-18979699 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 88, 164

Conread position: 434-800
Cow position: chr21:25190403-25190018 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 148

Conread position: 440-709
Cow position: chr21:42364677-42364403 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 6, 139

Conread position: 441-791
Cow position: chr21:37147037-37147408 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 101

Conread position: 447-800
Cow position: chr21:27033174-27032812 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 8, 133

Conread position: 448-800
Cow position: chr21:17144422-17144055 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 131

Conread position: 455-800
Cow position: chr21:47360447-47360802 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 457-800
Cow position: chr21:47532458-47532101 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 113

Conread position: 461-673
Cow position: chr21:28442172-28441946 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 127

Conread position: 462-800
Cow position: chr21:32396311-32396657 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 110

Conread position: 464-800
Cow position: chr21:30565463-30565121 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 115

Conread position: 474-787
Cow position: chr21:39059616-39059939 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 14, 124

Conread position: 491-800
Cow position: chr21:49647284-49647598 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 96

Conread position: 499-713
Cow position: chr21:23448927-23448712 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 75

Conread position: 502-710
Cow position: chr21:8126603-8126813 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 74

Conread position: 522-800
Cow position: chr21:4189195-4188903 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 99, 52

Conread position: 522-800
Cow position: chr21:34823829-34823543 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 67

Conread position: 523-787
Cow position: chr21:18791783-18792059 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 52

Conread position: 523-800
Cow position: chr21:31252639-31252354 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 49

Conread position: 523-800
Cow position: chr21:34657643-34657361 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 523-800
Cow position: chr21:37323150-37323433 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 50

Conread position: 523-800
Cow position: chr21:39400887-39400603 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 48

Conread position: 525-800
Cow position: chr21:13163061-13162801 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 48

Conread position: 526-800
Cow position: chr21:27263331-27263057 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 46

Conread position: 534-793
Cow position: chr21:25987055-25986790 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 535-800
Cow position: chr21:14534253-14533980 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 54

Conread position: 548-799
Cow position: chr21:26615257-26615516 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 65

Conread position: 548-800
Cow position: chr21:18846709-18846967 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 24

Conread position: 548-800
Cow position: chr21:32573608-32573347 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 24

Conread position: 550-800
Cow position: chr21:15274967-15274709 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 20

Conread position: 557-800
Cow position: chr21:27522211-27522455 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 85, 15

Conread position: 558-784
Cow position: chr21:28616874-28616649 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 70, 12

Conread position: 560-800
Cow position: chr21:30192948-30193193 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 82, 23

Conread position: 564-800
Cow position: chr21:14727300-14727054 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 584-800
Cow position: chr21:33420382-33420601 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 188

Conread position: 591-800
Cow position: chr21:11405293-11405513 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 591-800
Cow position: chr21:38027206-38026985 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 591-800
Cow position: chr21:39428989-39428769 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 593-785
Cow position: chr21:1284362-1284564 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 621-800
Cow position: chr21:19099004-19098817 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 146

Conread position: 623-787
Cow position: chr21:3804228-3804400 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 640-800
Cow position: chr21:8419589-8419424 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 647-800
Cow position: chr21:2664635-2664798 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 0

Show alignments to all cow chromosomes.