Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 1-360
Cow position: chr22:13235312-13234962 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 16

Conread position: 1-607
Cow position: chr22:25743187-25743772 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 2-798
Cow position: chr22:36208705-36207901 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 38

Conread position: 21-800
Cow position: chr22:32894882-32894102 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 152

Conread position: 28-148
Cow position: chr22:34750389-34750265 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 28-257
Cow position: chr22:23854688-23854466 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 199, 137

Conread position: 28-411
Cow position: chr22:30111217-30110842 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 64

Conread position: 28-570
Cow position: chr22:27791187-27790646 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 295

Conread position: 28-799
Cow position: chr22:30963854-30963096 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 37

Conread position: 29-800
Cow position: chr22:14154964-14155758 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 151

Conread position: 30-666
Cow position: chr22:19712428-19713052 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 32-800
Cow position: chr22:13210347-13209576 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 45

Conread position: 34-711
Cow position: chr22:1592000-1591327 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 34-800
Cow position: chr22:19139738-19140511 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 132

Conread position: 35-765
Cow position: chr22:39038403-39039154 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 201

Conread position: 35-800
Cow position: chr22:41271244-41272008 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 113

Conread position: 36-156
Cow position: chr22:12572943-12572821 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 36-259
Cow position: chr22:33952457-33952666 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 11

Conread position: 36-794
Cow position: chr22:3807657-3806887 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 280

Conread position: 38-228
Cow position: chr22:1610016-1610199 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 9

Conread position: 38-239
Cow position: chr22:14824819-14825015 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-240
Cow position: chr22:32407337-32407533 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-248
Cow position: chr22:44382570-44382366 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-256
Cow position: chr22:11678801-11679013 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 9

Conread position: 38-259
Cow position: chr22:3432855-3433070 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-265
Cow position: chr22:16883491-16883710 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-267
Cow position: chr22:33196092-33196316 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-285
Cow position: chr22:3027821-3027579 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-285
Cow position: chr22:44490566-44490324 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr22:45365862-45365619 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 9

Conread position: 38-288
Cow position: chr22:12974871-12975116 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 9

Conread position: 38-292
Cow position: chr22:15397902-15398153 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-304
Cow position: chr22:12889682-12889941 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 13

Conread position: 38-319
Cow position: chr22:2669185-2668909 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr22:13329255-13329565 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr22:25645790-25646100 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 9

Conread position: 38-363
Cow position: chr22:26799577-26799897 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-377
Cow position: chr22:9969108-9969440 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 9

Conread position: 38-380
Cow position: chr22:6130448-6130783 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-392
Cow position: chr22:23802943-23803292 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-395
Cow position: chr22:15729854-15729504 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-395
Cow position: chr22:39255139-39254790 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-411
Cow position: chr22:21330706-21331070 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-414
Cow position: chr22:6623842-6623473 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-419
Cow position: chr22:35640138-35639764 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-428
Cow position: chr22:299766-299383 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-428
Cow position: chr22:27337201-27337585 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-438
Cow position: chr22:27285399-27285006 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-439
Cow position: chr22:42933748-42934150 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 38-446
Cow position: chr22:4537967-4537566 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-452
Cow position: chr22:29624381-29623974 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-470
Cow position: chr22:6755207-6755634 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-470
Cow position: chr22:6756568-6756996 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-472
Cow position: chr22:32709649-32710076 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-477
Cow position: chr22:42923119-42923551 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-479
Cow position: chr22:3809030-3808596 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-479
Cow position: chr22:26184420-26184861 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 38-485
Cow position: chr22:31375931-31375490 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-515
Cow position: chr22:10596493-10596023 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-518
Cow position: chr22:37031666-37032139 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-555
Cow position: chr22:36857613-36858127 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-566
Cow position: chr22:4930379-4930907 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-568
Cow position: chr22:13326023-13326548 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr22:5313181-5312649 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr22:5640263-5640795 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr22:556373-556953 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 38-631
Cow position: chr22:22563633-22563043 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-662
Cow position: chr22:22279053-22278433 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-666
Cow position: chr22:7303531-7304164 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-699
Cow position: chr22:11642969-11643627 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr22:11231334-11232001 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr22:28996346-28997017 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 38-711
Cow position: chr22:43279518-43280191 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 9

Conread position: 38-718
Cow position: chr22:46566011-46566691 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-718
Cow position: chr22:46582695-46583375 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-786
Cow position: chr22:14808218-14807462 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-798
Cow position: chr22:19599840-19600606 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-798
Cow position: chr22:39464576-39465345 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 38-799
Cow position: chr22:9270163-9269393 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr22:10906242-10907011 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr22:17324539-17325308 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr22:20569078-20569847 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr22:25337116-25336345 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr22:31316505-31315737 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 38-800
Cow position: chr22:31330911-31331678 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr22:33950997-33951758 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr22:44099104-44099875 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 39-800
Cow position: chr22:38439417-38440174 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 40-570
Cow position: chr22:2070711-2070176 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 40-570
Cow position: chr22:6285768-6286300 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-570
Cow position: chr22:46568149-46568690 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 40-625
Cow position: chr22:29582717-29583270 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 139

Conread position: 40-627
Cow position: chr22:7436347-7435776 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 40-632
Cow position: chr22:22160461-22159889 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 40-690
Cow position: chr22:28144144-28144786 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 128

Conread position: 40-691
Cow position: chr22:3942022-3941369 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 123

Conread position: 40-711
Cow position: chr22:29553213-29553891 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 31

Conread position: 40-713
Cow position: chr22:33798044-33798716 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 40-720
Cow position: chr22:8418208-8417533 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 40-734
Cow position: chr22:15174300-15173609 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-781
Cow position: chr22:33094301-33093551 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 40-785
Cow position: chr22:13553317-13552565 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-791
Cow position: chr22:6924985-6924245 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 40-791
Cow position: chr22:33901335-33902100 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-792
Cow position: chr22:8877011-8876242 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 133

Conread position: 40-794
Cow position: chr22:10161705-10160928 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 40-794
Cow position: chr22:15012728-15013489 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-794
Cow position: chr22:18233828-18233074 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 30

Conread position: 40-796
Cow position: chr22:13017041-13017802 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 54

Conread position: 40-798
Cow position: chr22:30514995-30514239 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 93

Conread position: 40-799
Cow position: chr22:15307998-15308768 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-799
Cow position: chr22:40828103-40828873 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-799
Cow position: chr22:41845608-41846370 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chr22:541099-540328 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-800
Cow position: chr22:3269880-3270633 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 99

Conread position: 40-800
Cow position: chr22:3274395-3275163 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 40-800
Cow position: chr22:6340614-6339848 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 126

Conread position: 40-800
Cow position: chr22:8775757-8776524 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr22:10550839-10550060 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr22:11753691-11754448 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 40-800
Cow position: chr22:11837461-11838225 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr22:16203755-16202993 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr22:19823161-19822385 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 40-800
Cow position: chr22:20236611-20237380 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 40-800
Cow position: chr22:21192252-21193008 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 40-800
Cow position: chr22:22108003-22107237 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr22:29464846-29464085 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-800
Cow position: chr22:29855811-29855043 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr22:30674775-30675533 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 121

Conread position: 40-800
Cow position: chr22:32811249-32812017 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 40-800
Cow position: chr22:32944412-32943642 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr22:35909522-35910294 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chr22:36555188-36555954 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 133

Conread position: 40-800
Cow position: chr22:37289893-37290648 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 125

Conread position: 40-800
Cow position: chr22:37535363-37536137 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 81

Conread position: 40-800
Cow position: chr22:39903345-39902575 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr22:43261829-43261059 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 143

Conread position: 40-800
Cow position: chr22:44365246-44366016 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chr22:44463271-44462492 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 41-797
Cow position: chr22:8733583-8734339 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 41-800
Cow position: chr22:12224945-12225702 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 42-779
Cow position: chr22:39472638-39473397 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 42-800
Cow position: chr22:5316184-5315434 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 43-794
Cow position: chr22:32221399-32220660 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 110

Conread position: 44-693
Cow position: chr22:39696047-39695400 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 44-780
Cow position: chr22:22048241-22048986 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-791
Cow position: chr22:34606127-34605387 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 124

Conread position: 44-795
Cow position: chr22:26244304-26243572 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 44-800
Cow position: chr22:18807286-18808038 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 44-800
Cow position: chr22:29398040-29397278 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 118

Conread position: 44-800
Cow position: chr22:34172410-34171644 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 45-761
Cow position: chr22:23581848-23582581 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 281

Conread position: 45-800
Cow position: chr22:28786068-28785313 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 48-798
Cow position: chr22:1162-419 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 42

Conread position: 48-799
Cow position: chr22:8773051-8773811 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 50-706
Cow position: chr22:30176648-30176009 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 50-779
Cow position: chr22:9284788-9285527 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 116

Conread position: 50-800
Cow position: chr22:5016034-5015281 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 50-800
Cow position: chr22:27306022-27306770 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 53-800
Cow position: chr22:17070430-17069710 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 28

Conread position: 53-800
Cow position: chr22:41407518-41408267 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 59-800
Cow position: chr22:32952188-32951434 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 279

Conread position: 61-713
Cow position: chr22:41388338-41387699 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 168

Conread position: 61-800
Cow position: chr22:37324198-37323463 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 63-728
Cow position: chr22:46528433-46527754 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 70-800
Cow position: chr22:32210533-32209805 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 94

Conread position: 70-800
Cow position: chr22:33201203-33200475 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 87

Conread position: 71-753
Cow position: chr22:5928974-5929653 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 61

Conread position: 72-800
Cow position: chr22:26166868-26167594 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 100

Conread position: 81-632
Cow position: chr22:26658706-26658139 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 220

Conread position: 81-656
Cow position: chr22:47906273-47905695 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 64

Conread position: 81-800
Cow position: chr22:12059899-12060614 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 463
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 21

Conread position: 81-800
Cow position: chr22:14816723-14817446 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 38

Conread position: 82-800
Cow position: chr22:32018636-32019365 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 118

Conread position: 85-796
Cow position: chr22:13769180-13768502 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 37

Conread position: 89-783
Cow position: chr22:1521563-1522263 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 75

Conread position: 90-794
Cow position: chr22:1036777-1036079 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 74

Conread position: 91-798
Cow position: chr22:15496240-15495576 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 80

Conread position: 92-800
Cow position: chr22:48271105-48271821 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 96-800
Cow position: chr22:3488430-3489142 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 68

Conread position: 100-656
Cow position: chr22:34750268-34749736 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 34

Conread position: 101-693
Cow position: chr22:5330901-5331468 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 71

Conread position: 106-800
Cow position: chr22:1027900-1027212 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 217

Conread position: 111-800
Cow position: chr22:30918955-30918284 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 94

Conread position: 133-570
Cow position: chr22:11922206-11922618 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 135-794
Cow position: chr22:15356867-15356211 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 46

Conread position: 139-700
Cow position: chr22:5623776-5624340 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 108

Conread position: 165-570
Cow position: chr22:13187101-13186715 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 76

Conread position: 172-711
Cow position: chr22:31593431-31593975 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 141

Conread position: 172-800
Cow position: chr22:10330957-10330354 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 91

Conread position: 172-800
Cow position: chr22:28130574-28129947 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 159

Conread position: 172-800
Cow position: chr22:36571714-36572344 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 122

Conread position: 173-800
Cow position: chr22:982158-981516 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 181-800
Cow position: chr22:14509699-14510323 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 143

Conread position: 184-651
Cow position: chr22:42976543-42976084 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 111

Conread position: 185-800
Cow position: chr22:10361733-10361119 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 47

Conread position: 185-800
Cow position: chr22:22607981-22607352 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 117

Conread position: 210-798
Cow position: chr22:26759762-26759161 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 124

Conread position: 215-631
Cow position: chr22:9277582-9277172 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 110

Conread position: 215-675
Cow position: chr22:40385713-40385276 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 303
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 89

Conread position: 217-800
Cow position: chr22:44924553-44925132 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 99

Conread position: 224-800
Cow position: chr22:36188822-36188245 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 78

Conread position: 228-800
Cow position: chr22:11305666-11305078 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 238-800
Cow position: chr22:34608236-34607683 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 239-800
Cow position: chr22:11987951-11988512 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 39

Conread position: 239-800
Cow position: chr22:23864577-23864008 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 250-711
Cow position: chr22:27385798-27386264 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 53

Conread position: 250-800
Cow position: chr22:3433205-3433769 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 252-800
Cow position: chr22:697688-697126 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 50

Conread position: 256-793
Cow position: chr22:35754945-35755492 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 73

Conread position: 256-800
Cow position: chr22:2415638-2415091 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 62

Conread position: 263-673
Cow position: chr22:322088-322494 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 38

Conread position: 263-793
Cow position: chr22:31645837-31645313 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 38

Conread position: 269-770
Cow position: chr22:20088100-20087592 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 269-800
Cow position: chr22:45845628-45845093 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 291-800
Cow position: chr22:35934253-35934774 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 294-794
Cow position: chr22:15858495-15857977 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 299-800
Cow position: chr22:10786175-10785681 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 306-800
Cow position: chr22:42777356-42776882 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 16

Conread position: 331-800
Cow position: chr22:304629-304164 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 61

Conread position: 342-800
Cow position: chr22:36503043-36503507 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 345-631
Cow position: chr22:34894211-34893923 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 28, 72

Conread position: 345-794
Cow position: chr22:8881796-8881346 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 346-788
Cow position: chr22:15920181-15920624 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 136

Conread position: 346-800
Cow position: chr22:38553880-38553430 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 162

Conread position: 347-780
Cow position: chr22:15057938-15057492 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 357

Conread position: 352-797
Cow position: chr22:46578052-46578507 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 352-800
Cow position: chr22:21593081-21592617 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 113

Conread position: 352-800
Cow position: chr22:44382382-44381919 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 244

Conread position: 353-791
Cow position: chr22:18188835-18188416 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 8, 65

Conread position: 354-794
Cow position: chr22:15953353-15953800 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 129

Conread position: 362-777
Cow position: chr22:15497637-15497212 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 73

Conread position: 362-800
Cow position: chr22:8340056-8339611 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 201

Conread position: 364-786
Cow position: chr22:13696284-13696714 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 36

Conread position: 365-800
Cow position: chr22:25968030-25968466 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 171

Conread position: 366-800
Cow position: chr22:1517397-1517848 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 214

Conread position: 374-787
Cow position: chr22:47957641-47958058 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 385-800
Cow position: chr22:29012786-29012357 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 390-800
Cow position: chr22:36357668-36357251 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 391-568
Cow position: chr22:13295940-13295764 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 86

Conread position: 397-794
Cow position: chr22:15942120-15942530 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 102

Conread position: 398-713
Cow position: chr22:33436573-33436883 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 134, 83

Conread position: 402-800
Cow position: chr22:45013377-45013779 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 75

Conread position: 404-796
Cow position: chr22:839075-839474 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 16

Conread position: 404-800
Cow position: chr22:41971950-41972346 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 176

Conread position: 408-800
Cow position: chr22:12868848-12869262 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 35

Conread position: 413-800
Cow position: chr22:19048185-19048577 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 140

Conread position: 414-800
Cow position: chr22:46033812-46033420 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 48

Conread position: 418-708
Cow position: chr22:15872378-15872086 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 65

Conread position: 421-781
Cow position: chr22:10314212-10313840 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 153

Conread position: 421-797
Cow position: chr22:34884267-34883881 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 221, 10

Conread position: 421-800
Cow position: chr22:26089648-26090042 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 175

Conread position: 423-641
Cow position: chr22:31212948-31212730 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 162

Conread position: 424-800
Cow position: chr22:39443439-39443811 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 37

Conread position: 424-800
Cow position: chr22:43045137-43045520 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 37

Conread position: 427-800
Cow position: chr22:34931497-34931885 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 138

Conread position: 430-794
Cow position: chr22:5836110-5835749 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 71

Conread position: 433-651
Cow position: chr22:30189882-30189667 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 79

Conread position: 435-800
Cow position: chr22:9728422-9728779 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 152, 101

Conread position: 445-800
Cow position: chr22:18603247-18603617 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 134

Conread position: 448-796
Cow position: chr22:24817204-24817566 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 146

Conread position: 454-791
Cow position: chr22:25340701-25340356 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 9

Conread position: 455-800
Cow position: chr22:15174518-15174878 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 141

Conread position: 457-796
Cow position: chr22:33113685-33113335 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 5

Conread position: 457-800
Cow position: chr22:29955651-29955997 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 82

Conread position: 462-800
Cow position: chr22:2389848-2390191 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 110

Conread position: 464-800
Cow position: chr22:3065258-3065605 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 466-769
Cow position: chr22:37032336-37032650 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 67, 108

Conread position: 466-800
Cow position: chr22:533634-533295 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 68

Conread position: 468-788
Cow position: chr22:13721200-13721525 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 111

Conread position: 481-800
Cow position: chr22:41946189-41946522 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 116

Conread position: 489-793
Cow position: chr22:1080407-1080093 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 16, 90

Conread position: 493-800
Cow position: chr22:21364075-21364392 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 41

Conread position: 493-800
Cow position: chr22:45543434-45543748 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 149, 82

Conread position: 496-800
Cow position: chr22:42994683-42994367 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 83

Conread position: 498-710
Cow position: chr22:21935363-21935576 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 77

Conread position: 499-788
Cow position: chr22:40386138-40385845 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 77

Conread position: 499-800
Cow position: chr22:9147900-9147593 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 5

Conread position: 502-793
Cow position: chr22:29062289-29061991 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 71

Conread position: 506-800
Cow position: chr22:6722072-6722380 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 68

Conread position: 522-800
Cow position: chr22:699421-699139 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 117, 58

Conread position: 522-800
Cow position: chr22:10577008-10577294 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 67

Conread position: 523-798
Cow position: chr22:13775968-13775695 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 57

Conread position: 523-799
Cow position: chr22:18122314-18122583 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 174, 49

Conread position: 523-800
Cow position: chr22:12625080-12625363 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 50

Conread position: 524-791
Cow position: chr22:31598787-31598507 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 109, 48

Conread position: 525-800
Cow position: chr22:43789204-43788922 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 118, 47

Conread position: 527-800
Cow position: chr22:27223364-27223643 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 47

Conread position: 533-800
Cow position: chr22:9371826-9371552 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 39

Conread position: 545-795
Cow position: chr22:288178-288433 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 83, 27

Conread position: 545-800
Cow position: chr22:26104682-26104945 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 27

Conread position: 569-800
Cow position: chr22:24186463-24186224 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 183

Conread position: 574-800
Cow position: chr22:33387345-33387573 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 52

Conread position: 581-800
Cow position: chr22:21756799-21756579 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 44

Conread position: 586-800
Cow position: chr22:36584215-36584435 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 84

Conread position: 589-800
Cow position: chr22:13185220-13185002 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 120

Conread position: 591-798
Cow position: chr22:34758647-34758866 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 591-800
Cow position: chr22:12968992-12969210 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 177

Conread position: 591-800
Cow position: chr22:36858132-36858342 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 48, 135

Conread position: 593-794
Cow position: chr22:15049367-15049170 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 112

Conread position: 593-800
Cow position: chr22:5312335-5312553 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 600-794
Cow position: chr22:6202067-6202266 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 173

Conread position: 609-800
Cow position: chr22:46568692-46568895 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 618-800
Cow position: chr22:18195081-18194892 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 171

Conread position: 627-800
Cow position: chr22:11698235-11698414 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 11

Conread position: 639-800
Cow position: chr22:1280295-1280456 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 42

Conread position: 643-800
Cow position: chr22:43236197-43236031 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 644-800
Cow position: chr22:42500007-42500172 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.