Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 2-316
Cow position: chr5:49479140-49478820 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 2-629
Cow position: chr5:40711649-40712267 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 53

Conread position: 3-784
Cow position: chr5:54089512-54088761 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 25-221
Cow position: chr5:1460666-1460857 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 142

Conread position: 28-140
Cow position: chr5:37714152-37714266 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 28-287
Cow position: chr5:48406801-48407061 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 0

Conread position: 28-309
Cow position: chr5:20808443-20808160 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 28-385
Cow position: chr5:54556984-54556628 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 9

Conread position: 28-570
Cow position: chr5:55195235-55194695 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 9

Conread position: 28-668
Cow position: chr5:36406957-36406321 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 28-800
Cow position: chr5:27491784-27490999 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 120

Conread position: 28-800
Cow position: chr5:43992080-43991306 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 286

Conread position: 30-795
Cow position: chr5:53835474-53834681 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 32-753
Cow position: chr5:1344105-1344824 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 109

Conread position: 33-316
Cow position: chr5:40531867-40532144 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 20

Conread position: 33-710
Cow position: chr5:39815507-39816177 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 59

Conread position: 34-800
Cow position: chr5:3500332-3501104 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 128

Conread position: 35-709
Cow position: chr5:279384-280055 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 12

Conread position: 36-762
Cow position: chr5:6670383-6671107 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 36-798
Cow position: chr5:11955715-11956470 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 56

Conread position: 38-236
Cow position: chr5:30274296-30274488 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-236
Cow position: chr5:52226477-52226669 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-244
Cow position: chr5:6528449-6528250 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 9

Conread position: 38-247
Cow position: chr5:38818722-38818925 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-251
Cow position: chr5:24614215-24614010 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-253
Cow position: chr5:76097696-76097904 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-255
Cow position: chr5:10482603-10482814 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chr5:4715968-4716181 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-265
Cow position: chr5:31687167-31686945 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr5:35455352-35455575 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr5:42871611-42871388 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-273
Cow position: chr5:34583522-34583752 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-273
Cow position: chr5:58441309-58441081 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-285
Cow position: chr5:54678790-54679032 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr5:3065874-3066117 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr5:34480201-34480444 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr5:61762972-61763215 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-288
Cow position: chr5:7007010-7007255 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-297
Cow position: chr5:13127734-13127988 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 9

Conread position: 38-303
Cow position: chr5:60897076-60897336 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-304
Cow position: chr5:18287435-18287176 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 9

Conread position: 38-312
Cow position: chr5:9056190-9056459 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr5:46628473-46628197 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-337
Cow position: chr5:4014985-4015279 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-347
Cow position: chr5:33870049-33870350 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-361
Cow position: chr5:6694212-6694527 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-361
Cow position: chr5:68377385-68377070 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-362
Cow position: chr5:9164862-9165180 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 34, 9

Conread position: 38-367
Cow position: chr5:30258937-30259258 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-371
Cow position: chr5:2262605-2262927 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 38-371
Cow position: chr5:33077739-33077414 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-377
Cow position: chr5:13453448-13453780 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 9

Conread position: 38-379
Cow position: chr5:57879661-57879327 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 9

Conread position: 38-382
Cow position: chr5:10250479-10250816 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 38-382
Cow position: chr5:40115984-40116321 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 9

Conread position: 38-391
Cow position: chr5:6584736-6585080 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 9

Conread position: 38-398
Cow position: chr5:59876969-59877322 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 9

Conread position: 38-406
Cow position: chr5:49970184-49970545 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-409
Cow position: chr5:45025367-45025737 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-414
Cow position: chr5:26074900-26075268 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-418
Cow position: chr5:29771287-29770913 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-428
Cow position: chr5:2427958-2428337 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-428
Cow position: chr5:46732568-46732949 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-428
Cow position: chr5:64844348-64844732 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-431
Cow position: chr5:37736454-37736070 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-439
Cow position: chr5:27461276-27461670 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-439
Cow position: chr5:47055155-47055549 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-468
Cow position: chr5:11988688-11989111 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-475
Cow position: chr5:37430722-37431152 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-477
Cow position: chr5:34612567-34612151 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-479
Cow position: chr5:5081251-5080818 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-487
Cow position: chr5:35543453-35543011 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-487
Cow position: chr5:46845279-46845721 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-514
Cow position: chr5:50622452-50622921 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-515
Cow position: chr5:19283716-19284178 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-531
Cow position: chr5:3228969-3229453 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-531
Cow position: chr5:48374457-48373971 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-557
Cow position: chr5:10417554-10418071 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-563
Cow position: chr5:46587271-46587789 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr5:351063-351596 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-570
Cow position: chr5:5814306-5814838 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr5:23881537-23882068 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr5:29633190-29633722 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr5:37609215-37609747 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr5:44380248-44379702 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 293

Conread position: 38-570
Cow position: chr5:59518222-59518754 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-616
Cow position: chr5:47589802-47590375 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-629
Cow position: chr5:11986390-11986974 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr5:10514914-10514324 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr5:11780074-11780677 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-633
Cow position: chr5:23641218-23641826 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 38

Conread position: 38-647
Cow position: chr5:45999252-45999869 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-661
Cow position: chr5:31119403-31120015 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-688
Cow position: chr5:68273055-68273704 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-689
Cow position: chr5:6734995-6735639 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 255
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 34, 9

Conread position: 38-695
Cow position: chr5:410926-411581 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-709
Cow position: chr5:53184705-53185379 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr5:43984876-43984206 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 119

Conread position: 38-718
Cow position: chr5:31285651-31284972 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-720
Cow position: chr5:29969402-29968719 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-785
Cow position: chr5:5924189-5924938 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-788
Cow position: chr5:75754329-75755081 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-794
Cow position: chr5:14635785-14636548 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-796
Cow position: chr5:26101513-26100761 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-797
Cow position: chr5:12134375-12133621 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-799
Cow position: chr5:29255420-29256187 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 38-799
Cow position: chr5:37380879-37380112 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:442520-443285 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:709357-710127 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:1058772-1059543 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:1383771-1383005 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr5:1394657-1395434 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr5:3545089-3544332 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:5107017-5106248 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:10772036-10772802 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:18557624-18558380 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:19978117-19978890 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:20107238-20108003 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:21188725-21187958 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 38-800
Cow position: chr5:30583120-30582350 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:34709561-34708793 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 11

Conread position: 38-800
Cow position: chr5:42283957-42283194 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:45179055-45179822 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:46667863-46667098 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 38-800
Cow position: chr5:47559767-47560537 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr5:49220703-49221469 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 125

Conread position: 38-800
Cow position: chr5:58246125-58245356 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:64778212-64778978 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr5:72857671-72856898 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 40-570
Cow position: chr5:35763059-35762552 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-570
Cow position: chr5:37758035-37758578 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 76

Conread position: 40-570
Cow position: chr5:70593211-70593740 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-693
Cow position: chr5:36723950-36724584 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 106

Conread position: 40-710
Cow position: chr5:39447763-39448423 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 40-713
Cow position: chr5:9675825-9676509 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 273

Conread position: 40-786
Cow position: chr5:34528330-34527615 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 40-793
Cow position: chr5:45705816-45705044 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 302

Conread position: 40-794
Cow position: chr5:28224224-28223470 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 86

Conread position: 40-794
Cow position: chr5:59082423-59083179 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-795
Cow position: chr5:14550817-14551573 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 40-798
Cow position: chr5:1338134-1338895 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 29

Conread position: 40-798
Cow position: chr5:2977599-2976812 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 284

Conread position: 40-798
Cow position: chr5:15760595-15761344 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 40-798
Cow position: chr5:29741767-29742531 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-800
Cow position: chr5:446288-445503 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:2918249-2917486 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:4753340-4754109 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chr5:6124369-6125138 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr5:6454870-6455639 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr5:10853045-10853808 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:11631191-11631961 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chr5:13806968-13807727 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:15677854-15677085 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-800
Cow position: chr5:17027867-17027101 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 139

Conread position: 40-800
Cow position: chr5:18118182-18118951 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 100

Conread position: 40-800
Cow position: chr5:21190011-21189245 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:25913532-25912744 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 289

Conread position: 40-800
Cow position: chr5:26053525-26052755 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:29635223-29634453 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:34682571-34683336 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 124

Conread position: 40-800
Cow position: chr5:36369198-36369968 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chr5:37626640-37625883 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:41547238-41547983 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 119

Conread position: 40-800
Cow position: chr5:41587068-41586298 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:41981170-41980440 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 40-800
Cow position: chr5:46780303-46779540 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 40-800
Cow position: chr5:46816318-46817078 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 40-800
Cow position: chr5:47343668-47342898 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:49116567-49117327 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 40-800
Cow position: chr5:49522497-49521728 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 40-800
Cow position: chr5:51165517-51166285 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:51747010-51746248 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 100

Conread position: 40-800
Cow position: chr5:52822415-52823183 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:53075076-53075846 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:54337692-54336926 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:54927133-54927895 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:54951324-54952098 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr5:55631858-55631088 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chr5:57335570-57336340 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chr5:57935345-57936098 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 40-800
Cow position: chr5:58770081-58770846 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 40-800
Cow position: chr5:59065238-59064468 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 40-800
Cow position: chr5:62436917-62436147 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 40-800
Cow position: chr5:64062121-64061352 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 41-785
Cow position: chr5:41392513-41391768 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 105

Conread position: 41-791
Cow position: chr5:4962599-4963354 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 125

Conread position: 41-800
Cow position: chr5:3790016-3789252 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 41-800
Cow position: chr5:25926643-25927414 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 41-800
Cow position: chr5:54929466-54930223 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 41-800
Cow position: chr5:62378156-62377390 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 57

Conread position: 42-710
Cow position: chr5:50599833-50599182 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 131

Conread position: 42-791
Cow position: chr5:59781992-59782729 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 124

Conread position: 42-794
Cow position: chr5:5938091-5937336 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 124

Conread position: 42-800
Cow position: chr5:31710084-31709324 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 139

Conread position: 42-800
Cow position: chr5:51502665-51501908 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 126

Conread position: 43-635
Cow position: chr5:72172801-72172202 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 119

Conread position: 43-800
Cow position: chr5:18127404-18126649 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 149

Conread position: 43-800
Cow position: chr5:32260700-32261454 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 62

Conread position: 44-768
Cow position: chr5:7498195-7498929 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 44-799
Cow position: chr5:19969267-19970007 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 44-800
Cow position: chr5:25927923-25928674 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 104

Conread position: 44-800
Cow position: chr5:31635213-31634462 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 104

Conread position: 44-800
Cow position: chr5:34192716-34191947 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 28

Conread position: 44-800
Cow position: chr5:55723319-55722553 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 45-800
Cow position: chr5:41410656-41411414 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 129

Conread position: 48-789
Cow position: chr5:7176084-7175333 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 114

Conread position: 48-800
Cow position: chr5:3971306-3970549 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 48-800
Cow position: chr5:39363657-39362896 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 118

Conread position: 48-800
Cow position: chr5:72045880-72046639 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 49-800
Cow position: chr5:15722535-15723292 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 50-631
Cow position: chr5:33189987-33189419 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 115

Conread position: 50-640
Cow position: chr5:32614272-32614853 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 388
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 67

Conread position: 53-686
Cow position: chr5:25495629-25496262 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 119

Conread position: 53-794
Cow position: chr5:31561012-31560274 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 53-800
Cow position: chr5:32697041-32697778 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 53-800
Cow position: chr5:40928247-40928996 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 228

Conread position: 54-705
Cow position: chr5:16909134-16909778 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 162

Conread position: 54-753
Cow position: chr5:14904301-14905000 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 55-611
Cow position: chr5:21547532-21548067 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 42

Conread position: 56-609
Cow position: chr5:70249908-70249358 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 168

Conread position: 56-800
Cow position: chr5:26467375-26466663 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 118

Conread position: 59-800
Cow position: chr5:21828606-21827844 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 59-800
Cow position: chr5:54623393-54622639 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 62-800
Cow position: chr5:56443028-56442283 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 62-800
Cow position: chr5:57613305-57614037 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 160

Conread position: 66-800
Cow position: chr5:49127479-49126733 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 258

Conread position: 70-779
Cow position: chr5:72007139-72007837 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 94

Conread position: 70-797
Cow position: chr5:7140346-7141073 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 80

Conread position: 78-787
Cow position: chr5:35207990-35207279 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 94

Conread position: 81-704
Cow position: chr5:28037834-28037222 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 92-794
Cow position: chr5:62159168-62159895 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 240

Conread position: 93-800
Cow position: chr5:73485150-73485875 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 71

Conread position: 102-800
Cow position: chr5:46625554-46626252 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 64

Conread position: 108-771
Cow position: chr5:42676969-42676300 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 109-800
Cow position: chr5:10541958-10542647 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 33

Conread position: 110-796
Cow position: chr5:46470035-46470716 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 125

Conread position: 111-799
Cow position: chr5:41228325-41229022 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 17

Conread position: 119-651
Cow position: chr5:27656574-27656041 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 204

Conread position: 127-795
Cow position: chr5:32964355-32965031 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 45

Conread position: 130-615
Cow position: chr5:34584491-34584965 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 130-800
Cow position: chr5:7553462-7552800 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 88

Conread position: 144-800
Cow position: chr5:57125698-57125042 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 149-800
Cow position: chr5:12728476-12729136 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 564, 0

Conread position: 152-800
Cow position: chr5:59771729-59771071 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 93

Conread position: 160-800
Cow position: chr5:6571577-6572219 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 85

Conread position: 164-615
Cow position: chr5:32339286-32339758 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 88

Conread position: 165-800
Cow position: chr5:3551054-3551679 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 46

Conread position: 166-635
Cow position: chr5:33471865-33472328 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 167-800
Cow position: chr5:6151160-6151808 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 171-783
Cow position: chr5:40357304-40357903 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 107

Conread position: 173-800
Cow position: chr5:66338508-66337888 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 125

Conread position: 190-625
Cow position: chr5:57987140-57986705 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 140

Conread position: 190-800
Cow position: chr5:18492054-18491430 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 36

Conread position: 192-800
Cow position: chr5:46677256-46676637 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 110

Conread position: 205-800
Cow position: chr5:44708738-44709346 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 98

Conread position: 211-794
Cow position: chr5:5681881-5682481 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 92

Conread position: 215-640
Cow position: chr5:27343668-27344103 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 215-640
Cow position: chr5:27346845-27346410 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 85

Conread position: 215-777
Cow position: chr5:23828582-23829139 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 74

Conread position: 215-800
Cow position: chr5:4388803-4388203 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 215-800
Cow position: chr5:5715464-5716051 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 215-800
Cow position: chr5:10839855-10840445 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 215-800
Cow position: chr5:10922468-10921869 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 215-800
Cow position: chr5:18250670-18250077 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 215-800
Cow position: chr5:27174323-27173733 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 215-800
Cow position: chr5:55832214-55832810 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 217-800
Cow position: chr5:54722270-54721680 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 104

Conread position: 221-800
Cow position: chr5:23647819-23648405 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 44

Conread position: 223-798
Cow position: chr5:58192530-58191944 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 79

Conread position: 226-651
Cow position: chr5:72345231-72345660 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 75

Conread position: 230-800
Cow position: chr5:8996418-8996982 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 40

Conread position: 241-800
Cow position: chr5:18404474-18405030 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 246-800
Cow position: chr5:4015280-4015848 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 250-800
Cow position: chr5:24299601-24299037 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 80

Conread position: 250-800
Cow position: chr5:41953721-41954267 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 73

Conread position: 252-771
Cow position: chr5:46797484-46796961 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 70

Conread position: 253-690
Cow position: chr5:32938039-32937599 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 57

Conread position: 256-788
Cow position: chr5:54693535-54694071 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 68

Conread position: 256-800
Cow position: chr5:70402436-70401906 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 65

Conread position: 260-624
Cow position: chr5:14141216-14140853 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 44

Conread position: 261-791
Cow position: chr5:46672180-46671643 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 41

Conread position: 261-800
Cow position: chr5:24102226-24101674 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 40

Conread position: 261-800
Cow position: chr5:48804894-48805427 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 269-709
Cow position: chr5:7042793-7042366 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 40

Conread position: 273-686
Cow position: chr5:47601327-47600915 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 56

Conread position: 279-787
Cow position: chr5:42744342-42743829 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 40

Conread position: 282-570
Cow position: chr5:7581557-7581844 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 41

Conread position: 289-800
Cow position: chr5:21524591-21524077 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 12

Conread position: 291-568
Cow position: chr5:44752777-44753062 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 40

Conread position: 291-678
Cow position: chr5:52645797-52646185 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 291-798
Cow position: chr5:18901866-18901360 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 291-800
Cow position: chr5:18702893-18703401 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 294-800
Cow position: chr5:48408914-48409419 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 331-570
Cow position: chr5:38831728-38831479 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 331-698
Cow position: chr5:46334293-46333922 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 252

Conread position: 331-800
Cow position: chr5:42044347-42043869 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 335-800
Cow position: chr5:63312017-63312494 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 55

Conread position: 337-800
Cow position: chr5:52829284-52829760 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 242

Conread position: 338-800
Cow position: chr5:22857132-22857610 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 338-800
Cow position: chr5:68337027-68337480 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 340-800
Cow position: chr5:27691482-27691013 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 340-800
Cow position: chr5:76098531-76099006 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 341-710
Cow position: chr5:13259073-13258713 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 341-787
Cow position: chr5:68593919-68593472 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 239

Conread position: 341-800
Cow position: chr5:34471446-34471916 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 84

Conread position: 342-777
Cow position: chr5:25920297-25920735 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 146

Conread position: 342-798
Cow position: chr5:49566061-49565598 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 61

Conread position: 345-800
Cow position: chr5:32754963-32755420 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 46

Conread position: 350-800
Cow position: chr5:41603765-41603305 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 362-675
Cow position: chr5:34637921-34637598 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 11, 222

Conread position: 364-800
Cow position: chr5:6695009-6694558 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 372-695
Cow position: chr5:54454948-54454634 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 39

Conread position: 372-800
Cow position: chr5:4348548-4348965 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 78

Conread position: 372-800
Cow position: chr5:29559055-29558621 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 46

Conread position: 372-800
Cow position: chr5:54785642-54786084 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 93

Conread position: 376-625
Cow position: chr5:28928325-28928576 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 149, 26

Conread position: 377-570
Cow position: chr5:20408598-20408799 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 0

Conread position: 377-710
Cow position: chr5:40827915-40828256 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 205

Conread position: 377-761
Cow position: chr5:45941534-45941928 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 204

Conread position: 377-800
Cow position: chr5:31917061-31916648 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 44

Conread position: 381-800
Cow position: chr5:3695789-3695377 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 382-800
Cow position: chr5:29122575-29122985 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 142, 84

Conread position: 385-630
Cow position: chr5:66112988-66113230 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 141, 30

Conread position: 386-800
Cow position: chr5:15855784-15856204 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 55

Conread position: 393-800
Cow position: chr5:24577883-24577460 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 204

Conread position: 394-800
Cow position: chr5:295706-295289 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 191

Conread position: 404-800
Cow position: chr5:10066115-10066526 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 180

Conread position: 404-800
Cow position: chr5:44617580-44617169 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 192

Conread position: 405-744
Cow position: chr5:18275880-18275555 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 10, 24

Conread position: 405-799
Cow position: chr5:4166058-4165656 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 50

Conread position: 413-800
Cow position: chr5:23845128-23845516 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 99

Conread position: 413-800
Cow position: chr5:67654751-67654350 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 48

Conread position: 416-800
Cow position: chr5:8178557-8178163 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 163

Conread position: 417-800
Cow position: chr5:26073366-26073762 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 26

Conread position: 418-800
Cow position: chr5:58199430-58199034 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 178

Conread position: 419-570
Cow position: chr5:33064535-33064688 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 68

Conread position: 419-800
Cow position: chr5:18667727-18667331 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 177

Conread position: 420-800
Cow position: chr5:12921815-12921422 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 105, 158

Conread position: 421-794
Cow position: chr5:46685219-46685585 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 91, 41

Conread position: 421-797
Cow position: chr5:64958365-64958751 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 13

Conread position: 421-800
Cow position: chr5:40896932-40897327 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 26

Conread position: 421-800
Cow position: chr5:46734861-46735252 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 49

Conread position: 421-800
Cow position: chr5:48065188-48065576 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 248
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 16

Conread position: 421-800
Cow position: chr5:51684202-51684597 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 155

Conread position: 422-798
Cow position: chr5:40270433-40270813 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 162

Conread position: 423-800
Cow position: chr5:18883200-18883583 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 105, 67

Conread position: 424-794
Cow position: chr5:38738441-38738058 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 161

Conread position: 424-800
Cow position: chr5:7396658-7396272 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 171

Conread position: 424-800
Cow position: chr5:37735790-37735400 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 155

Conread position: 425-784
Cow position: chr5:58461282-58461659 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 259
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 151

Conread position: 434-794
Cow position: chr5:41523583-41523969 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 28

Conread position: 435-800
Cow position: chr5:4434100-4434480 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 144

Conread position: 435-800
Cow position: chr5:54136233-54136614 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 162

Conread position: 436-800
Cow position: chr5:9002708-9003086 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 142

Conread position: 436-800
Cow position: chr5:75755982-75755609 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 150

Conread position: 441-792
Cow position: chr5:47855224-47854859 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 137

Conread position: 441-800
Cow position: chr5:16085408-16085785 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 142

Conread position: 446-800
Cow position: chr5:70607691-70607334 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 58, 133

Conread position: 449-800
Cow position: chr5:34523857-34524213 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 135, 44

Conread position: 450-800
Cow position: chr5:71456659-71457022 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 462-794
Cow position: chr5:32810653-32810996 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 120

Conread position: 462-798
Cow position: chr5:15455128-15454801 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 69

Conread position: 462-800
Cow position: chr5:12212911-12212557 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 132

Conread position: 462-800
Cow position: chr5:12337650-12337298 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 133

Conread position: 462-800
Cow position: chr5:41489046-41488694 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 133

Conread position: 462-800
Cow position: chr5:64844890-64845241 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 463-800
Cow position: chr5:27195686-27196036 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 66, 134

Conread position: 468-800
Cow position: chr5:6585082-6585429 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 125

Conread position: 474-794
Cow position: chr5:17645732-17646055 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 44

Conread position: 486-794
Cow position: chr5:48535190-48534887 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 87

Conread position: 490-710
Cow position: chr5:12558228-12558458 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 90

Conread position: 499-800
Cow position: chr5:14542961-14543277 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 80

Conread position: 509-800
Cow position: chr5:47361531-47361240 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 33

Conread position: 511-800
Cow position: chr5:4630081-4629792 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 61

Conread position: 512-800
Cow position: chr5:49132511-49132220 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 130, 60

Conread position: 522-798
Cow position: chr5:29222955-29223239 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 67

Conread position: 522-798
Cow position: chr5:57926837-57927110 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 29

Conread position: 523-761
Cow position: chr5:35180438-35180192 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 66

Conread position: 523-784
Cow position: chr5:54397218-54397480 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 119, 51

Conread position: 523-788
Cow position: chr5:16894842-16895110 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 50

Conread position: 523-800
Cow position: chr5:52605314-52605601 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 52

Conread position: 524-800
Cow position: chr5:31921366-31921086 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 48

Conread position: 524-800
Cow position: chr5:48574519-48574795 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 111, 48

Conread position: 525-713
Cow position: chr5:4328591-4328408 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 117, 58

Conread position: 533-800
Cow position: chr5:6180838-6180560 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 158, 39

Conread position: 534-770
Cow position: chr5:55088152-55087907 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 108, 38

Conread position: 534-787
Cow position: chr5:8529943-8529688 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 38

Conread position: 540-704
Cow position: chr5:3441630-3441467 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 33

Conread position: 545-800
Cow position: chr5:17387130-17387393 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 27

Conread position: 545-800
Cow position: chr5:24643587-24643846 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 27

Conread position: 546-800
Cow position: chr5:26134982-26135243 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 21

Conread position: 546-800
Cow position: chr5:33536897-33536641 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 167, 26

Conread position: 547-798
Cow position: chr5:29459177-29458942 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 548-800
Cow position: chr5:24159219-24158959 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 41

Conread position: 549-800
Cow position: chr5:36906779-36907038 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 23, 40

Conread position: 555-800
Cow position: chr5:24632762-24633015 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 34

Conread position: 583-798
Cow position: chr5:27613476-27613265 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 25

Conread position: 588-800
Cow position: chr5:14781984-14782203 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 178

Conread position: 591-781
Cow position: chr5:2704307-2704509 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 73

Conread position: 591-800
Cow position: chr5:29769304-29769084 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 594-786
Cow position: chr5:46650338-46650135 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 596-800
Cow position: chr5:38848346-38848561 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 600-800
Cow position: chr5:51293726-51293937 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 608-800
Cow position: chr5:25901252-25901450 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 31

Conread position: 614-800
Cow position: chr5:46587785-46587980 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 620-800
Cow position: chr5:45999961-46000148 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 66

Conread position: 626-798
Cow position: chr5:37608514-37608334 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 62

Conread position: 634-800
Cow position: chr5:47697006-47697182 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 643-800
Cow position: chr5:10299658-10299492 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 35

Conread position: 643-800
Cow position: chr5:13630304-13630470 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 645-788
Cow position: chr5:72345910-72346061 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 648-794
Cow position: chr5:69771247-69771091 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 653-794
Cow position: chr5:23642038-23642182 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 38

Conread position: 671-800
Cow position: chr5:50604192-50604330 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.