Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 1-704
Cow position: chr9:33658734-33659425 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 28

Conread position: 1-800
Cow position: chr9:13847629-13848450 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 19-705
Cow position: chr9:16981170-16981873 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 25-800
Cow position: chr9:34945141-34945922 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 26-570
Cow position: chr9:26281942-26281396 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 27-467
Cow position: chr9:34093141-34092688 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 30-455
Cow position: chr9:1950200-1950609 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 32-314
Cow position: chr9:32396229-32396509 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 15

Conread position: 32-784
Cow position: chr9:38546682-38547436 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 40

Conread position: 32-800
Cow position: chr9:21413169-21412404 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 34-800
Cow position: chr9:56165573-56166331 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 38

Conread position: 35-713
Cow position: chr9:27051017-27050340 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 290

Conread position: 36-708
Cow position: chr9:61846391-61845698 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 37

Conread position: 38-173
Cow position: chr9:27345151-27345017 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 9

Conread position: 38-231
Cow position: chr9:49279737-49279930 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-236
Cow position: chr9:32070915-32071107 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 9

Conread position: 38-248
Cow position: chr9:5429769-5429973 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-248
Cow position: chr9:18710298-18710502 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 9

Conread position: 38-248
Cow position: chr9:26462291-26462087 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 9

Conread position: 38-248
Cow position: chr9:47961513-47961309 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-254
Cow position: chr9:27040973-27040763 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-255
Cow position: chr9:31489329-31489121 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chr9:35375707-35375921 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chr9:42047780-42047993 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chr9:42049066-42049279 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-266
Cow position: chr9:1982045-1981822 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-269
Cow position: chr9:31124637-31124411 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 9

Conread position: 38-285
Cow position: chr9:18478034-18478276 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr9:19303403-19303160 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-286
Cow position: chr9:19593175-19592932 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-297
Cow position: chr9:62546289-62546543 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-304
Cow position: chr9:25996780-25997043 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 9

Conread position: 38-316
Cow position: chr9:9566837-9567110 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-316
Cow position: chr9:9681812-9682085 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr9:28244639-28244915 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr9:28292816-28293092 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chr9:54473420-54473696 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 9

Conread position: 38-328
Cow position: chr9:3004479-3004771 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-354
Cow position: chr9:26718938-26718630 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr9:7384878-7384568 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chr9:15843279-15842970 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 9

Conread position: 38-361
Cow position: chr9:29106891-29106575 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-362
Cow position: chr9:41145723-41146039 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 9

Conread position: 38-367
Cow position: chr9:42357341-42357662 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-370
Cow position: chr9:47799442-47799766 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 9

Conread position: 38-371
Cow position: chr9:22623289-22623614 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 9

Conread position: 38-379
Cow position: chr9:27993996-27994330 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-382
Cow position: chr9:17617438-17617100 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 9

Conread position: 38-382
Cow position: chr9:30334204-30334541 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-393
Cow position: chr9:18427014-18427364 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-410
Cow position: chr9:43225047-43225411 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-417
Cow position: chr9:12275239-12275612 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-417
Cow position: chr9:32236545-32236917 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-425
Cow position: chr9:54458272-54458647 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-436
Cow position: chr9:20092505-20092115 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-436
Cow position: chr9:31077392-31076994 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-444
Cow position: chr9:56529692-56530091 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-448
Cow position: chr9:49872586-49872990 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-449
Cow position: chr9:47088309-47087905 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-453
Cow position: chr9:34310320-34310736 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-453
Cow position: chr9:41313594-41313184 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 9

Conread position: 38-458
Cow position: chr9:25645218-25645642 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-458
Cow position: chr9:46874953-46875367 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-466
Cow position: chr9:11841298-11841717 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-479
Cow position: chr9:8525351-8525774 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-487
Cow position: chr9:58251832-58252287 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-502
Cow position: chr9:11057066-11057522 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-515
Cow position: chr9:2715224-2715690 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-515
Cow position: chr9:64017356-64017825 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-518
Cow position: chr9:46683251-46682782 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-530
Cow position: chr9:5268842-5269320 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 38-534
Cow position: chr9:36025243-36025732 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-541
Cow position: chr9:22732415-22732920 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-559
Cow position: chr9:22242810-22243331 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr9:26431308-26431839 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chr9:56530550-56531082 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-611
Cow position: chr9:29534681-29534111 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-625
Cow position: chr9:15670713-15670129 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr9:125656-126232 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr9:1296055-1296646 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr9:2393763-2394353 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chr9:31361311-31361901 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-698
Cow position: chr9:3057766-3058415 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-700
Cow position: chr9:59454037-59454696 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr9:13620135-13620807 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr9:30187566-30186896 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr9:50899790-50900446 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chr9:56177735-56177064 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-722
Cow position: chr9:10643076-10643765 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-724
Cow position: chr9:44517844-44518522 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 109

Conread position: 38-763
Cow position: chr9:12379307-12378577 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-793
Cow position: chr9:5886535-5887292 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-798
Cow position: chr9:2857705-2856938 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-798
Cow position: chr9:34237894-34238665 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:1838813-1838047 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:3996909-3997668 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 129

Conread position: 38-800
Cow position: chr9:4939632-4940407 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:6253425-6252660 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:6707048-6707826 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:6887441-6886687 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:7058192-7058958 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 38-800
Cow position: chr9:7830033-7830811 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:9016933-9016166 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr9:22656660-22655903 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:32973227-32972459 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr9:37157751-37158518 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:42571077-42570306 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chr9:46628172-46627403 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chr9:46666927-46667706 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr9:47045809-47045039 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chr9:47171918-47171145 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 40-570
Cow position: chr9:20393842-20393310 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 40-652
Cow position: chr9:2287333-2287944 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 122

Conread position: 40-653
Cow position: chr9:27314590-27313993 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 32

Conread position: 40-710
Cow position: chr9:51556849-51556158 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 58

Conread position: 40-719
Cow position: chr9:11155791-11156494 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 40-785
Cow position: chr9:22755076-22755817 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-791
Cow position: chr9:23422438-23421687 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 102

Conread position: 40-793
Cow position: chr9:3755986-3756731 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-794
Cow position: chr9:1100446-1099692 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-794
Cow position: chr9:28786202-28785442 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 40-794
Cow position: chr9:30281154-30281918 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 40-794
Cow position: chr9:54996483-54995733 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 40-796
Cow position: chr9:59432368-59431597 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 40-799
Cow position: chr9:29338746-29337999 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 40-800
Cow position: chr9:173913-174681 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr9:771388-772154 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 40-800
Cow position: chr9:776939-777721 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 130

Conread position: 40-800
Cow position: chr9:874513-873748 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 40-800
Cow position: chr9:1061834-1062604 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr9:1070423-1071192 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 40-800
Cow position: chr9:1520443-1519683 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-800
Cow position: chr9:2547838-2548603 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 40-800
Cow position: chr9:3062469-3061679 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 306

Conread position: 40-800
Cow position: chr9:3411054-3411802 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 132

Conread position: 40-800
Cow position: chr9:5628680-5627911 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:6366251-6365469 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 224

Conread position: 40-800
Cow position: chr9:9491075-9491850 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 40-800
Cow position: chr9:13471735-13472471 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-800
Cow position: chr9:17018616-17017846 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:17060496-17061265 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:19155426-19156200 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 40-800
Cow position: chr9:19546380-19545603 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr9:22802803-22803560 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-800
Cow position: chr9:24917426-24918196 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 107

Conread position: 40-800
Cow position: chr9:27038975-27038199 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:27781050-27781820 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:28682062-28681292 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr9:28773403-28774175 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 133

Conread position: 40-800
Cow position: chr9:30402134-30401374 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 137

Conread position: 40-800
Cow position: chr9:31416653-31417424 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 40-800
Cow position: chr9:34058772-34059541 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chr9:35564677-35565447 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:37173543-37174313 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr9:37254266-37253496 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:39302691-39303461 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:43494910-43494140 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:44515982-44516720 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 142

Conread position: 40-800
Cow position: chr9:50327563-50326789 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chr9:51177792-51178577 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 40-800
Cow position: chr9:54412769-54413517 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:59197704-59196948 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 26

Conread position: 40-800
Cow position: chr9:62817358-62818129 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chr9:64011373-64012137 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 41-711
Cow position: chr9:11477397-11478068 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 41-794
Cow position: chr9:10566504-10567267 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 42-640
Cow position: chr9:29184846-29184254 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 30

Conread position: 42-640
Cow position: chr9:59507361-59507953 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 129

Conread position: 42-796
Cow position: chr9:3932253-3933018 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 132

Conread position: 42-800
Cow position: chr9:3959339-3960091 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 190

Conread position: 42-800
Cow position: chr9:20942324-20941564 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 43-681
Cow position: chr9:35592272-35592920 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 291

Conread position: 43-800
Cow position: chr9:3076000-3075233 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 5

Conread position: 44-711
Cow position: chr9:10327092-10326423 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-788
Cow position: chr9:47882428-47883182 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 117

Conread position: 44-800
Cow position: chr9:1990692-1991460 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 123

Conread position: 44-800
Cow position: chr9:6763913-6764680 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-800
Cow position: chr9:7103373-7104139 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-800
Cow position: chr9:12284849-12285615 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-800
Cow position: chr9:13181768-13181011 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 45-631
Cow position: chr9:4192174-4191589 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 121

Conread position: 45-641
Cow position: chr9:26477843-26478441 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 21

Conread position: 45-800
Cow position: chr9:2863719-2864473 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 31

Conread position: 48-794
Cow position: chr9:26577567-26576799 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 48-798
Cow position: chr9:2223495-2222757 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 99

Conread position: 48-799
Cow position: chr9:40316975-40316229 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 126

Conread position: 48-800
Cow position: chr9:7006594-7005833 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 48-800
Cow position: chr9:9558274-9559032 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 111

Conread position: 48-800
Cow position: chr9:33844174-33843415 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 50-706
Cow position: chr9:22361308-22361956 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 125

Conread position: 50-781
Cow position: chr9:59541273-59540554 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 116

Conread position: 50-800
Cow position: chr9:18110578-18109794 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 50-800
Cow position: chr9:62668700-62669458 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 53-800
Cow position: chr9:217260-218024 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 72

Conread position: 53-800
Cow position: chr9:53531546-53530795 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 55-794
Cow position: chr9:2207826-2208571 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 55-800
Cow position: chr9:20989153-20988391 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 282

Conread position: 59-570
Cow position: chr9:52633205-52632698 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 123

Conread position: 59-790
Cow position: chr9:47263880-47263141 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 109

Conread position: 59-800
Cow position: chr9:59479015-59479756 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 62-788
Cow position: chr9:22443307-22442595 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 62-791
Cow position: chr9:18072318-18071583 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 99

Conread position: 62-800
Cow position: chr9:3807432-3806688 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 104

Conread position: 71-786
Cow position: chr9:52001290-52002004 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 75

Conread position: 71-800
Cow position: chr9:24997185-24996465 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 112

Conread position: 71-800
Cow position: chr9:28025649-28024911 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 93

Conread position: 76-800
Cow position: chr9:34553428-34554130 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 69

Conread position: 81-713
Cow position: chr9:5030113-5030742 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 195

Conread position: 81-800
Cow position: chr9:3216515-3217242 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 98

Conread position: 82-635
Cow position: chr9:7619692-7619150 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 354
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 91, 102

Conread position: 82-800
Cow position: chr9:9957371-9958092 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 39

Conread position: 82-800
Cow position: chr9:59495366-59496091 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 82

Conread position: 87-798
Cow position: chr9:51011320-51010655 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 77

Conread position: 88-786
Cow position: chr9:18243171-18243877 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 76

Conread position: 91-616
Cow position: chr9:23438494-23437980 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 32

Conread position: 91-800
Cow position: chr9:48794487-48795200 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 73

Conread position: 92-800
Cow position: chr9:46524403-46525114 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 87

Conread position: 97-710
Cow position: chr9:10857833-10857224 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 67

Conread position: 97-794
Cow position: chr9:30675872-30675173 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 62

Conread position: 97-800
Cow position: chr9:17634284-17633579 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 65

Conread position: 97-800
Cow position: chr9:44202278-44202988 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 102-800
Cow position: chr9:5058304-5058990 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 7

Conread position: 108-800
Cow position: chr9:56562542-56561843 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 456
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 76

Conread position: 117-800
Cow position: chr9:18831522-18830830 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 479

Conread position: 124-800
Cow position: chr9:18506053-18506732 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 40

Conread position: 127-800
Cow position: chr9:26087236-26087910 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 46

Conread position: 130-784
Cow position: chr9:5533154-5533823 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 130-800
Cow position: chr9:6979973-6979294 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 102

Conread position: 132-800
Cow position: chr9:34568412-34567740 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 149-800
Cow position: chr9:1405546-1404901 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 90

Conread position: 160-610
Cow position: chr9:25469414-25469879 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 183

Conread position: 160-799
Cow position: chr9:19079599-19078958 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 151

Conread position: 163-800
Cow position: chr9:8951312-8951941 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 142

Conread position: 163-800
Cow position: chr9:50776428-50775798 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 166-795
Cow position: chr9:46670656-46670028 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 14

Conread position: 167-785
Cow position: chr9:12847575-12848197 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 150

Conread position: 172-800
Cow position: chr9:14046396-14045765 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 31

Conread position: 173-800
Cow position: chr9:5451906-5452548 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 173-800
Cow position: chr9:31811305-31810669 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 173-800
Cow position: chr9:40142626-40143259 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 173-800
Cow position: chr9:50841180-50840524 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 174-798
Cow position: chr9:16179313-16178681 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 93

Conread position: 174-800
Cow position: chr9:42901717-42902343 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 136

Conread position: 178-800
Cow position: chr9:47110954-47110354 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 12

Conread position: 183-800
Cow position: chr9:12162324-12161687 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 151

Conread position: 184-800
Cow position: chr9:30440111-30439488 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 142

Conread position: 186-771
Cow position: chr9:8728057-8727475 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 117

Conread position: 191-797
Cow position: chr9:15215228-15214626 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 139

Conread position: 191-799
Cow position: chr9:23028329-23028936 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 195-800
Cow position: chr9:45877229-45876610 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 107

Conread position: 202-635
Cow position: chr9:20321337-20320902 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 202-800
Cow position: chr9:42868168-42868781 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 100

Conread position: 203-800
Cow position: chr9:2834292-2834908 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 206-800
Cow position: chr9:3052964-3052357 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 208-800
Cow position: chr9:49258811-49259414 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 94

Conread position: 209-800
Cow position: chr9:5431158-5430558 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 29

Conread position: 210-748
Cow position: chr9:18205755-18205226 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 120

Conread position: 215-798
Cow position: chr9:22570794-22570199 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 101

Conread position: 215-800
Cow position: chr9:1306659-1307260 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 115

Conread position: 215-800
Cow position: chr9:4673746-4673147 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 219-777
Cow position: chr9:37169147-37168583 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 80

Conread position: 221-800
Cow position: chr9:15052214-15052797 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 224-800
Cow position: chr9:34918287-34917711 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 78

Conread position: 227-800
Cow position: chr9:1640942-1640347 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 14

Conread position: 230-800
Cow position: chr9:55032178-55031597 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 72

Conread position: 233-658
Cow position: chr9:30804062-30803642 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 57

Conread position: 241-800
Cow position: chr9:34689869-34690438 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 249-800
Cow position: chr9:790664-791220 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 53

Conread position: 250-800
Cow position: chr9:33845656-33845110 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 254-800
Cow position: chr9:4284874-4284315 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 50

Conread position: 261-655
Cow position: chr9:12194814-12195211 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 64

Conread position: 264-800
Cow position: chr9:5007606-5007065 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 281-800
Cow position: chr9:18711116-18710585 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 294-794
Cow position: chr9:56861570-56862067 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 299-800
Cow position: chr9:35624919-35624406 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 331-713
Cow position: chr9:3730594-3730201 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 28

Conread position: 331-793
Cow position: chr9:24424099-24423621 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 266

Conread position: 331-795
Cow position: chr9:9516236-9515768 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 331-800
Cow position: chr9:43496711-43496226 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 266

Conread position: 334-789
Cow position: chr9:33067920-33068397 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 249

Conread position: 336-794
Cow position: chr9:1938472-1938935 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 237

Conread position: 337-800
Cow position: chr9:51692057-51692528 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 110

Conread position: 341-800
Cow position: chr9:64562760-64562303 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 141

Conread position: 347-800
Cow position: chr9:47006294-47005834 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 232

Conread position: 352-635
Cow position: chr9:25959119-25959405 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 226

Conread position: 352-782
Cow position: chr9:29106431-29105982 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 228

Conread position: 352-798
Cow position: chr9:199271-199718 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 244

Conread position: 353-705
Cow position: chr9:10665459-10665099 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 228

Conread position: 354-609
Cow position: chr9:17580157-17580417 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 226

Conread position: 354-800
Cow position: chr9:28703003-28702541 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 359-682
Cow position: chr9:20959344-20959014 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 63

Conread position: 359-708
Cow position: chr9:32141765-32141420 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 96

Conread position: 359-800
Cow position: chr9:2618236-2618705 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 221

Conread position: 359-800
Cow position: chr9:13313106-13312655 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 238

Conread position: 364-798
Cow position: chr9:37098135-37097700 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 364-800
Cow position: chr9:13493272-13492848 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 106

Conread position: 368-570
Cow position: chr9:61023415-61023626 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 372-754
Cow position: chr9:33999767-33999375 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 100

Conread position: 372-800
Cow position: chr9:2527811-2527379 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 285
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 157, 215

Conread position: 373-794
Cow position: chr9:49982031-49981601 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 207

Conread position: 373-797
Cow position: chr9:25974455-25974888 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 207

Conread position: 378-709
Cow position: chr9:17307336-17307000 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 204

Conread position: 379-718
Cow position: chr9:20578287-20577947 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 197

Conread position: 380-787
Cow position: chr9:30139087-30139506 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 83

Conread position: 391-800
Cow position: chr9:21461970-21461558 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 96

Conread position: 392-800
Cow position: chr9:6328899-6329315 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 26

Conread position: 393-800
Cow position: chr9:5524846-5525248 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 62

Conread position: 399-798
Cow position: chr9:5608274-5608671 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 403-800
Cow position: chr9:35068-35459 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 128, 21

Conread position: 404-798
Cow position: chr9:4305576-4305983 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 196

Conread position: 410-800
Cow position: chr9:59539398-59539004 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 55

Conread position: 413-679
Cow position: chr9:11410691-11410424 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 5

Conread position: 413-800
Cow position: chr9:8281780-8282176 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 41

Conread position: 421-657
Cow position: chr9:38346672-38346909 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 162

Conread position: 421-781
Cow position: chr9:21841091-21841453 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 165

Conread position: 421-788
Cow position: chr9:4127483-4127838 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 113

Conread position: 421-800
Cow position: chr9:5517661-5517275 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 106, 43

Conread position: 421-800
Cow position: chr9:28657571-28657960 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 158

Conread position: 422-703
Cow position: chr9:23043795-23044082 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 156

Conread position: 430-800
Cow position: chr9:32985846-32985470 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 154, 111

Conread position: 431-800
Cow position: chr9:17302504-17302886 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 148

Conread position: 431-800
Cow position: chr9:54459026-54459410 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 165

Conread position: 435-798
Cow position: chr9:8601436-8601795 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 106

Conread position: 444-791
Cow position: chr9:10678471-10678828 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 444-800
Cow position: chr9:2873938-2873566 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 137

Conread position: 447-800
Cow position: chr9:53777148-53776785 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 81, 30

Conread position: 450-794
Cow position: chr9:29300574-29300913 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 161, 71

Conread position: 450-800
Cow position: chr9:1850202-1850551 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 85

Conread position: 461-800
Cow position: chr9:11744249-11744595 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 29

Conread position: 462-626
Cow position: chr9:15950129-15949972 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 462-800
Cow position: chr9:13187649-13187296 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 134

Conread position: 463-795
Cow position: chr9:10671905-10672238 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 9

Conread position: 464-800
Cow position: chr9:52526594-52526243 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 469-794
Cow position: chr9:9623368-9623036 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 41

Conread position: 472-800
Cow position: chr9:41312606-41312949 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 124

Conread position: 482-800
Cow position: chr9:36088948-36088626 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 104

Conread position: 490-800
Cow position: chr9:3546233-3545919 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 87

Conread position: 508-800
Cow position: chr9:9199484-9199188 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 69

Conread position: 509-800
Cow position: chr9:25547764-25548062 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 134, 36

Conread position: 512-800
Cow position: chr9:33057172-33056875 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 80

Conread position: 513-800
Cow position: chr9:29787291-29787585 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 66

Conread position: 522-800
Cow position: chr9:382516-382797 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 50

Conread position: 522-800
Cow position: chr9:1259814-1259524 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 90

Conread position: 522-800
Cow position: chr9:2214517-2214231 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 117, 61

Conread position: 522-800
Cow position: chr9:9210521-9210235 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 67

Conread position: 522-800
Cow position: chr9:45792226-45791940 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 67

Conread position: 523-788
Cow position: chr9:52407946-52408224 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 50

Conread position: 523-800
Cow position: chr9:13220915-13220632 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 82, 49

Conread position: 523-800
Cow position: chr9:54997251-54996965 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 50

Conread position: 527-800
Cow position: chr9:55796733-55797012 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 45

Conread position: 533-799
Cow position: chr9:51160209-51159938 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 106, 39

Conread position: 533-800
Cow position: chr9:33478258-33477982 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 41

Conread position: 551-796
Cow position: chr9:8738291-8738550 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 560-791
Cow position: chr9:62443640-62443876 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 22

Conread position: 585-800
Cow position: chr9:39728292-39728518 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 36

Conread position: 588-800
Cow position: chr9:15987320-15987097 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 93

Conread position: 588-800
Cow position: chr9:22319100-22319323 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 71

Conread position: 591-800
Cow position: chr9:18539969-18539754 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 162

Conread position: 593-795
Cow position: chr9:388716-388502 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 595-800
Cow position: chr9:43856231-43856446 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 602-800
Cow position: chr9:4191579-4191373 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 12

Conread position: 602-800
Cow position: chr9:9872240-9872031 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 618-800
Cow position: chr9:64049553-64049366 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 157

Conread position: 619-800
Cow position: chr9:42216636-42216447 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 54

Conread position: 621-800
Cow position: chr9:10939996-10939816 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 102

Conread position: 640-798
Cow position: chr9:24725855-24725694 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 88

Conread position: 645-800
Cow position: chr9:17588393-17588230 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 49

Show alignments to all cow chromosomes.