Cow genome map

Conread name: Liv1-LVR010054B02

Conread position: 1-184
Cow position: chrX:15049281-15049096 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 1-236
Cow position: chrX:6654506-6654739 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 139, 28

Conread position: 1-534
Cow position: chrX:13058376-13057836 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 212

Conread position: 1-788
Cow position: chrX:39558552-39559341 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 179

Conread position: 3-188
Cow position: chrX:32012253-32012436 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 14

Conread position: 26-229
Cow position: chrX:37037618-37037415 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 9

Conread position: 27-521
Cow position: chrX:20734429-20733938 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 39

Conread position: 27-786
Cow position: chrX:28623979-28624746 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 38

Conread position: 28-170
Cow position: chrX:39071463-39071321 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 26

Conread position: 28-212
Cow position: chrX:33519359-33519181 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 19

Conread position: 28-800
Cow position: chrX:2292822-2293600 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 29

Conread position: 30-800
Cow position: chrX:13405513-13406286 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 120

Conread position: 30-800
Cow position: chrX:25281704-25282493 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 125

Conread position: 31-800
Cow position: chrX:20801554-20800789 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 34-642
Cow position: chrX:40279573-40278983 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 16

Conread position: 34-668
Cow position: chrX:38140259-38140896 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 34-800
Cow position: chrX:15139770-15140531 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 34-800
Cow position: chrX:39351869-39352610 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 273

Conread position: 36-570
Cow position: chrX:6835486-6836015 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 37-334
Cow position: chrX:31745726-31746017 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 38-168
Cow position: chrX:39174443-39174573 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-235
Cow position: chrX:19495190-19495381 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 38-236
Cow position: chrX:3078817-3079009 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 38-236
Cow position: chrX:43730422-43730613 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 9

Conread position: 38-237
Cow position: chrX:24102749-24102557 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-244
Cow position: chrX:46579085-46579285 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-248
Cow position: chrX:24809200-24809404 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-254
Cow position: chrX:13385177-13384967 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chrX:2945098-2945313 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 9

Conread position: 38-257
Cow position: chrX:11672551-11672338 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chrX:13396482-13396694 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 9

Conread position: 38-257
Cow position: chrX:13686487-13686275 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chrX:27627125-27626912 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-257
Cow position: chrX:42221798-42222011 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 9

Conread position: 38-258
Cow position: chrX:7742687-7742901 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 38-258
Cow position: chrX:17980365-17980151 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 9

Conread position: 38-262
Cow position: chrX:20320997-20321216 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 11

Conread position: 38-265
Cow position: chrX:6652302-6652523 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-265
Cow position: chrX:34413546-34413324 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 9

Conread position: 38-272
Cow position: chrX:38094755-38094985 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 9

Conread position: 38-273
Cow position: chrX:7311763-7311533 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 9

Conread position: 38-273
Cow position: chrX:11663948-11663718 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 40, 9

Conread position: 38-273
Cow position: chrX:28058025-28058254 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-297
Cow position: chrX:32094680-32094935 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-297
Cow position: chrX:37403253-37403507 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 9

Conread position: 38-307
Cow position: chrX:5599208-5599471 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 38-314
Cow position: chrX:3161246-3161514 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 223, 153

Conread position: 38-314
Cow position: chrX:22078097-22077827 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 9

Conread position: 38-316
Cow position: chrX:6195984-6196256 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 9

Conread position: 38-316
Cow position: chrX:14134245-14133974 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 38-316
Cow position: chrX:27749239-27749512 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 9

Conread position: 38-316
Cow position: chrX:42591495-42591222 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 9

Conread position: 38-319
Cow position: chrX:15531385-15531658 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 9

Conread position: 38-319
Cow position: chrX:25276729-25277005 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 9

Conread position: 38-319
Cow position: chrX:48423705-48423429 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 9

Conread position: 38-326
Cow position: chrX:24787946-24788224 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 9

Conread position: 38-353
Cow position: chrX:22522061-22522368 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-356
Cow position: chrX:14121982-14122291 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 9

Conread position: 38-358
Cow position: chrX:32144393-32144704 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 9

Conread position: 38-363
Cow position: chrX:14819482-14819167 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 38-367
Cow position: chrX:30940951-30940630 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-370
Cow position: chrX:31605454-31605130 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 9

Conread position: 38-371
Cow position: chrX:24280705-24280382 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 9

Conread position: 38-383
Cow position: chrX:24587684-24588022 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 9

Conread position: 38-395
Cow position: chrX:31814119-31814469 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 9

Conread position: 38-400
Cow position: chrX:19022539-19022894 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-404
Cow position: chrX:44168539-44168899 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 9

Conread position: 38-408
Cow position: chrX:22557271-22556908 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-414
Cow position: chrX:37764427-37764796 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-414
Cow position: chrX:37772664-37773033 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-419
Cow position: chrX:15120119-15120489 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 9

Conread position: 38-420
Cow position: chrX:11715692-11716067 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-426
Cow position: chrX:14407680-14408061 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 38-435
Cow position: chrX:8782514-8782124 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-435
Cow position: chrX:37133764-37134153 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-443
Cow position: chrX:3570221-3569814 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-444
Cow position: chrX:22608822-22609221 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-449
Cow position: chrX:30531262-30531661 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-449
Cow position: chrX:37061021-37061425 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-470
Cow position: chrX:28555665-28556091 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 38-485
Cow position: chrX:19774710-19775150 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-487
Cow position: chrX:9085563-9086005 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-487
Cow position: chrX:18078140-18078583 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-492
Cow position: chrX:32039073-32039519 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-493
Cow position: chrX:9018533-9018981 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-494
Cow position: chrX:18024809-18024361 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-510
Cow position: chrX:1975827-1976292 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-510
Cow position: chrX:30965871-30965406 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-511
Cow position: chrX:5408825-5408359 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-515
Cow position: chrX:1576493-1576963 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-518
Cow position: chrX:7486634-7486161 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-525
Cow position: chrX:30822354-30821874 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-530
Cow position: chrX:27498538-27498062 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-531
Cow position: chrX:11358295-11358781 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-541
Cow position: chrX:10922801-10923299 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-558
Cow position: chrX:5306369-5305851 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-565
Cow position: chrX:38051662-38052189 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-568
Cow position: chrX:7118874-7119404 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-570
Cow position: chrX:26617151-26617683 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-584
Cow position: chrX:32331401-32330855 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-605
Cow position: chrX:36794764-36794215 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-616
Cow position: chrX:15346199-15346774 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-624
Cow position: chrX:40826977-40827552 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 126

Conread position: 38-625
Cow position: chrX:40544838-40545436 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 38-631
Cow position: chrX:361683-362273 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chrX:18451309-18451899 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chrX:20877993-20878587 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-631
Cow position: chrX:30816499-30817089 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-657
Cow position: chrX:5892998-5892380 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-657
Cow position: chrX:24509637-24509019 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-670
Cow position: chrX:30825418-30824785 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-682
Cow position: chrX:37816358-37815718 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-688
Cow position: chrX:29169564-29170221 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 11

Conread position: 38-708
Cow position: chrX:8530310-8529641 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chrX:2160535-2159863 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chrX:5123591-5124261 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chrX:11949723-11950388 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chrX:15114441-15113770 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-711
Cow position: chrX:19109271-19109943 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-711
Cow position: chrX:28314195-28313523 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-734
Cow position: chrX:33764114-33763419 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-793
Cow position: chrX:30197067-30196305 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-798
Cow position: chrX:23038227-23038982 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-798
Cow position: chrX:24482601-24483360 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 38-799
Cow position: chrX:28752570-28753335 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:323685-322914 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:2048879-2048112 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 132

Conread position: 38-800
Cow position: chrX:2478857-2479628 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:2485861-2486632 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:4622184-4622953 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:4905219-4905987 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:5288917-5289684 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:5319948-5320714 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chrX:5646334-5647104 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:7551025-7551801 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:7573149-7572391 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:9012097-9011331 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 38-800
Cow position: chrX:10444644-10445415 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 15

Conread position: 38-800
Cow position: chrX:14598615-14597846 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:17055339-17054568 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 120

Conread position: 38-800
Cow position: chrX:17995229-17994462 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:18656035-18656805 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chrX:19473391-19474148 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:21344164-21343395 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 38-800
Cow position: chrX:21768574-21767800 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:22493777-22493034 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:26759799-26760568 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:27422511-27423271 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:27977059-27977832 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:29848861-29849623 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:30163468-30164236 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:30171940-30172706 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:30180156-30180924 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:30837143-30836387 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:35533621-35532855 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 38-800
Cow position: chrX:36534965-36535729 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:38151458-38150689 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 38-800
Cow position: chrX:39559882-39560659 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 39-800
Cow position: chrX:20653164-20652417 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 40-608
Cow position: chrX:5376139-5375567 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-641
Cow position: chrX:11082843-11083436 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 40-652
Cow position: chrX:30143515-30144127 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 40-662
Cow position: chrX:30139014-30139637 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-679
Cow position: chrX:24173399-24174031 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 40-697
Cow position: chrX:35388137-35388807 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 40-709
Cow position: chrX:2523960-2524632 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 40-711
Cow position: chrX:14162961-14162290 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 40-711
Cow position: chrX:35240634-35239970 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-767
Cow position: chrX:35937302-35938042 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 40-768
Cow position: chrX:4750609-4751330 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-788
Cow position: chrX:38331152-38330396 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-791
Cow position: chrX:44192673-44193427 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 40-792
Cow position: chrX:18223183-18222423 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-794
Cow position: chrX:14801047-14801812 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 123

Conread position: 40-794
Cow position: chrX:21593053-21592299 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 40-794
Cow position: chrX:26531728-26530979 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-794
Cow position: chrX:31260860-31261627 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 40-794
Cow position: chrX:41846764-41847522 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-796
Cow position: chrX:24169545-24170309 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 100

Conread position: 40-797
Cow position: chrX:38852926-38852166 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 40-798
Cow position: chrX:12360659-12359890 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 40-798
Cow position: chrX:28517954-28518718 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 64

Conread position: 40-798
Cow position: chrX:29841399-29842176 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-798
Cow position: chrX:30228341-30229111 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 40-799
Cow position: chrX:3464306-3465073 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-799
Cow position: chrX:7755671-7754907 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-799
Cow position: chrX:22613156-22612404 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:671239-671993 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:2559192-2559960 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 13

Conread position: 40-800
Cow position: chrX:3361589-3360821 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:3417369-3418136 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:3649039-3649819 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 40-800
Cow position: chrX:4343519-4342751 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chrX:5334050-5334813 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 125

Conread position: 40-800
Cow position: chrX:5353533-5354300 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-800
Cow position: chrX:5866916-5866146 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:6454465-6453697 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:7097227-7096459 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 40-800
Cow position: chrX:7277697-7276961 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 127

Conread position: 40-800
Cow position: chrX:8434437-8435199 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 110

Conread position: 40-800
Cow position: chrX:9128826-9128055 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:9168844-9169605 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:10528004-10528784 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:10866097-10866861 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 40-800
Cow position: chrX:11145568-11146334 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chrX:12145864-12145099 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 40-800
Cow position: chrX:14781575-14782345 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 40-800
Cow position: chrX:15620762-15621531 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:16279419-16278656 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 40-800
Cow position: chrX:16466070-16465307 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 40-800
Cow position: chrX:16703440-16702671 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 125

Conread position: 40-800
Cow position: chrX:16711724-16710956 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chrX:16853619-16854365 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:17892313-17891546 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:18949975-18950736 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:19399548-19398778 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:21227242-21226479 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 40-800
Cow position: chrX:21833655-21832886 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 40-800
Cow position: chrX:22811656-22810889 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:22888428-22887662 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:23135342-23134591 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 17

Conread position: 40-800
Cow position: chrX:23280776-23280027 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 114

Conread position: 40-800
Cow position: chrX:23341227-23341991 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-800
Cow position: chrX:23386769-23387533 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chrX:23396376-23395607 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chrX:23987014-23986250 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 81

Conread position: 40-800
Cow position: chrX:24467355-24468123 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:25288909-25289679 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:26275909-26275139 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:27095889-27095137 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:27318986-27318231 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 115

Conread position: 40-800
Cow position: chrX:27759477-27758709 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 40-800
Cow position: chrX:28588740-28587972 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 40-800
Cow position: chrX:29226246-29225478 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:29760469-29759690 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:29913109-29912341 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 40-800
Cow position: chrX:30052699-30053468 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:30199222-30199992 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:31202610-31201841 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:31729228-31728467 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:31978076-31978840 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 40-800
Cow position: chrX:34009520-34008775 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 284

Conread position: 40-800
Cow position: chrX:34222519-34221758 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 40-800
Cow position: chrX:34761836-34761066 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:35609756-35608994 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:36195862-36195096 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 40-800
Cow position: chrX:36730154-36729384 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:37852905-37852138 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 32

Conread position: 40-800
Cow position: chrX:38230497-38231267 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:39185943-39185173 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:39714319-39713551 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 40-800
Cow position: chrX:40224473-40225234 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 40-800
Cow position: chrX:41157081-41156312 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 40-800
Cow position: chrX:42733635-42732872 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 41-800
Cow position: chrX:7809234-7809992 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 291

Conread position: 42-708
Cow position: chrX:10415758-10416431 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 42-794
Cow position: chrX:34554498-34553764 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 50

Conread position: 42-800
Cow position: chrX:1055620-1056387 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 137

Conread position: 42-800
Cow position: chrX:24309355-24310099 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 42-800
Cow position: chrX:28632710-28633454 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 44-610
Cow position: chrX:6493498-6492936 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 44-710
Cow position: chrX:6544022-6543364 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 122

Conread position: 44-711
Cow position: chrX:18897885-18898551 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-785
Cow position: chrX:15259853-15260604 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 44-794
Cow position: chrX:30454856-30455610 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-796
Cow position: chrX:19930196-19929441 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 44-800
Cow position: chrX:5280087-5280852 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 44-800
Cow position: chrX:6372947-6372180 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 44-800
Cow position: chrX:6869797-6870564 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 44-800
Cow position: chrX:8641554-8640788 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 44-800
Cow position: chrX:24769094-24769856 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 44-800
Cow position: chrX:44054568-44053816 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 26

Conread position: 45-800
Cow position: chrX:23572035-23572817 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 121

Conread position: 48-800
Cow position: chrX:16359247-16360007 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 118

Conread position: 48-800
Cow position: chrX:21686382-21685619 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 48-800
Cow position: chrX:46297422-46296662 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 50-696
Cow position: chrX:20131120-20131765 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 133

Conread position: 50-719
Cow position: chrX:7806137-7805469 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 50-798
Cow position: chrX:16086364-16087121 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 50-800
Cow position: chrX:23927412-23928153 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 50-800
Cow position: chrX:27305686-27304929 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 53-783
Cow position: chrX:6765981-6766717 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 276

Conread position: 53-794
Cow position: chrX:33803259-33803980 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 53-795
Cow position: chrX:6043728-6044452 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 106

Conread position: 53-799
Cow position: chrX:17663155-17663913 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 54-682
Cow position: chrX:37489474-37488856 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 112

Conread position: 54-800
Cow position: chrX:41106253-41106980 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 110

Conread position: 56-629
Cow position: chrX:37781331-37781886 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 103

Conread position: 57-798
Cow position: chrX:41733434-41734181 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 128

Conread position: 57-800
Cow position: chrX:38961093-38961850 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 109

Conread position: 58-800
Cow position: chrX:26754877-26755639 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 108

Conread position: 59-800
Cow position: chrX:13928003-13928742 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 59-800
Cow position: chrX:18248092-18247357 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 59-800
Cow position: chrX:18487963-18488714 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 61-786
Cow position: chrX:34993926-34993193 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 230

Conread position: 62-677
Cow position: chrX:40788908-40788269 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 62-788
Cow position: chrX:34441699-34442416 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 62-791
Cow position: chrX:39939002-39939744 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 70-800
Cow position: chrX:27590295-27591023 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 94

Conread position: 71-754
Cow position: chrX:41526782-41527463 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 38

Conread position: 71-800
Cow position: chrX:2383191-2382466 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 71-800
Cow position: chrX:16039943-16040679 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 93

Conread position: 71-800
Cow position: chrX:20954263-20953533 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 99

Conread position: 72-791
Cow position: chrX:3210807-3211527 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 26

Conread position: 72-800
Cow position: chrX:6407082-6406355 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 101

Conread position: 81-795
Cow position: chrX:37831740-37832444 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 159

Conread position: 81-800
Cow position: chrX:6581661-6580935 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 83

Conread position: 81-800
Cow position: chrX:9641705-9642432 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 83

Conread position: 81-800
Cow position: chrX:25404631-25405370 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 42

Conread position: 82-798
Cow position: chrX:24174225-24174947 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 89

Conread position: 82-799
Cow position: chrX:11073479-11074182 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 174

Conread position: 86-713
Cow position: chrX:30355117-30354491 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 132

Conread position: 88-800
Cow position: chrX:27450310-27451045 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 256

Conread position: 89-656
Cow position: chrX:23521785-23522337 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 368
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 193, 12

Conread position: 89-800
Cow position: chrX:1793441-1794186 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 36

Conread position: 90-800
Cow position: chrX:37118623-37117909 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 160

Conread position: 92-569
Cow position: chrX:38999619-38999146 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 204

Conread position: 92-799
Cow position: chrX:4996331-4995617 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 69

Conread position: 93-800
Cow position: chrX:2580133-2579419 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 71

Conread position: 94-800
Cow position: chrX:18194404-18193690 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 78

Conread position: 94-800
Cow position: chrX:23451743-23452447 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 70

Conread position: 96-800
Cow position: chrX:28504048-28503336 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 68

Conread position: 108-800
Cow position: chrX:20021277-20020581 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 56

Conread position: 111-711
Cow position: chrX:866093-865494 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 53

Conread position: 113-800
Cow position: chrX:29907507-29908202 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 51

Conread position: 123-800
Cow position: chrX:17158140-17158807 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 125-800
Cow position: chrX:2648673-2649350 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 156

Conread position: 125-800
Cow position: chrX:24291975-24292663 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 192

Conread position: 126-798
Cow position: chrX:46999964-47000651 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 138

Conread position: 128-679
Cow position: chrX:8103626-8104151 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 16

Conread position: 128-794
Cow position: chrX:16782960-16782288 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 36

Conread position: 160-793
Cow position: chrX:22125212-22125848 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 163

Conread position: 166-800
Cow position: chrX:30060536-30059887 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 6

Conread position: 172-667
Cow position: chrX:5639295-5639784 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 158

Conread position: 172-799
Cow position: chrX:29083721-29083068 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 131

Conread position: 172-800
Cow position: chrX:10412330-10412975 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 67

Conread position: 173-570
Cow position: chrX:45465085-45464687 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 83

Conread position: 173-786
Cow position: chrX:5391933-5392561 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 130

Conread position: 173-800
Cow position: chrX:3081489-3082134 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 173-800
Cow position: chrX:39730498-39731137 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 177-669
Cow position: chrX:22871755-22871259 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 18

Conread position: 179-800
Cow position: chrX:15151049-15151663 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 110

Conread position: 181-794
Cow position: chrX:21255409-21254785 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 149

Conread position: 183-795
Cow position: chrX:2300510-2299891 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 183-800
Cow position: chrX:12179306-12178674 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 120

Conread position: 183-800
Cow position: chrX:18455151-18455770 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 137

Conread position: 185-800
Cow position: chrX:4482580-4481967 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 134

Conread position: 185-800
Cow position: chrX:37079890-37080515 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 117

Conread position: 186-800
Cow position: chrX:20998647-20999267 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 139

Conread position: 189-754
Cow position: chrX:16020760-16021329 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 53

Conread position: 191-800
Cow position: chrX:31496359-31495737 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 111

Conread position: 192-651
Cow position: chrX:7178273-7177828 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 62

Conread position: 202-760
Cow position: chrX:40365132-40365706 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 122

Conread position: 204-686
Cow position: chrX:30421537-30422012 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 128

Conread position: 205-800
Cow position: chrX:23022922-23022318 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 125

Conread position: 211-800
Cow position: chrX:11408732-11409334 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 90

Conread position: 215-711
Cow position: chrX:40384645-40384154 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 215-800
Cow position: chrX:2500033-2500630 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 60

Conread position: 215-800
Cow position: chrX:5331838-5332431 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 59

Conread position: 215-800
Cow position: chrX:21583041-21582443 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 215-800
Cow position: chrX:30089453-30090042 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 89

Conread position: 215-800
Cow position: chrX:40693141-40693732 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 49

Conread position: 216-800
Cow position: chrX:28879008-28879581 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 217-800
Cow position: chrX:11744863-11744270 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 39

Conread position: 219-640
Cow position: chrX:24923444-24923028 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 93

Conread position: 221-800
Cow position: chrX:14049601-14050193 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 224-793
Cow position: chrX:25451912-25451345 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 85

Conread position: 224-798
Cow position: chrX:27616394-27615816 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 89

Conread position: 224-800
Cow position: chrX:30165086-30165662 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 89

Conread position: 228-800
Cow position: chrX:1616653-1617233 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 228-800
Cow position: chrX:22578804-22579387 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 11

Conread position: 233-800
Cow position: chrX:32584351-32584930 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 69

Conread position: 236-800
Cow position: chrX:22564109-22564683 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 66

Conread position: 239-683
Cow position: chrX:16688843-16688394 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 240-800
Cow position: chrX:26441686-26442250 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 248-800
Cow position: chrX:24109042-24109604 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 250-794
Cow position: chrX:36840267-36839718 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 82

Conread position: 250-794
Cow position: chrX:39556230-39556781 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 75

Conread position: 250-800
Cow position: chrX:10438375-10438905 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 75

Conread position: 252-699
Cow position: chrX:38935988-38935532 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 72

Conread position: 255-794
Cow position: chrX:1947401-1947935 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 46

Conread position: 257-686
Cow position: chrX:19658053-19657620 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 44

Conread position: 261-800
Cow position: chrX:5248933-5248390 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 8

Conread position: 261-800
Cow position: chrX:42222236-42222769 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 60

Conread position: 284-800
Cow position: chrX:11975918-11976445 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 291-573
Cow position: chrX:2366184-2365899 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 84, 32

Conread position: 291-793
Cow position: chrX:35028763-35028273 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 27

Conread position: 291-800
Cow position: chrX:4299454-4299940 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 29

Conread position: 291-800
Cow position: chrX:37403714-37404229 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 294-800
Cow position: chrX:32644005-32643486 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 306-800
Cow position: chrX:2812975-2813483 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 311-800
Cow position: chrX:34095203-34094706 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 7

Conread position: 326-796
Cow position: chrX:29029194-29029696 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 337
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 25

Conread position: 331-800
Cow position: chrX:13031164-13031650 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 127

Conread position: 331-800
Cow position: chrX:20504131-20503643 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 353

Conread position: 331-800
Cow position: chrX:39548884-39548399 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 262

Conread position: 332-788
Cow position: chrX:17889394-17889841 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 182

Conread position: 332-800
Cow position: chrX:16035028-16035508 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 332-800
Cow position: chrX:22870295-22869819 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 42

Conread position: 336-800
Cow position: chrX:25848285-25847817 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 242

Conread position: 339-794
Cow position: chrX:40560068-40560534 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 101

Conread position: 339-798
Cow position: chrX:13178117-13178605 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 254

Conread position: 341-800
Cow position: chrX:32144793-32145255 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 230

Conread position: 343-609
Cow position: chrX:2146564-2146302 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 344-800
Cow position: chrX:27754901-27754428 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 221

Conread position: 345-800
Cow position: chrX:22076871-22077340 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 252

Conread position: 352-800
Cow position: chrX:14124782-14125244 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 238

Conread position: 353-615
Cow position: chrX:23696932-23697205 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 233

Conread position: 353-699
Cow position: chrX:38569942-38569591 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 65

Conread position: 354-800
Cow position: chrX:5841756-5841314 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 38

Conread position: 363-800
Cow position: chrX:1550418-1549965 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 59

Conread position: 364-800
Cow position: chrX:24588288-24588734 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 36

Conread position: 370-787
Cow position: chrX:30085866-30086287 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 372-633
Cow position: chrX:16517689-16517954 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 207

Conread position: 372-800
Cow position: chrX:2008262-2008698 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 173

Conread position: 372-800
Cow position: chrX:12465472-12465038 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 28

Conread position: 372-800
Cow position: chrX:16526232-16525790 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 69

Conread position: 373-800
Cow position: chrX:19609118-19608675 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 223

Conread position: 376-800
Cow position: chrX:30134914-30135342 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 40

Conread position: 378-794
Cow position: chrX:38227875-38228311 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 24

Conread position: 380-800
Cow position: chrX:12307322-12307762 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 220

Conread position: 380-800
Cow position: chrX:13206387-13205955 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 216

Conread position: 390-635
Cow position: chrX:11613934-11613680 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 194

Conread position: 390-708
Cow position: chrX:25204760-25204437 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 390-766
Cow position: chrX:23415270-23415661 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 98

Conread position: 390-800
Cow position: chrX:10059890-10059466 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 206

Conread position: 390-800
Cow position: chrX:29099840-29099419 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 5

Conread position: 393-788
Cow position: chrX:22819477-22819090 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 79

Conread position: 397-800
Cow position: chrX:40496160-40496580 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 81

Conread position: 398-800
Cow position: chrX:15977536-15977953 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 196

Conread position: 402-567
Cow position: chrX:23326412-23326577 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 20

Conread position: 402-616
Cow position: chrX:27446088-27445872 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 75

Conread position: 402-800
Cow position: chrX:24232291-24231884 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 98, 48

Conread position: 404-800
Cow position: chrX:29700543-29700941 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 13

Conread position: 413-800
Cow position: chrX:22538631-22539033 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 166

Conread position: 416-798
Cow position: chrX:24826403-24826010 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 160

Conread position: 416-800
Cow position: chrX:21415266-21414867 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 163

Conread position: 417-800
Cow position: chrX:8590979-8590580 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 418-800
Cow position: chrX:12346293-12345896 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 178

Conread position: 418-800
Cow position: chrX:40070213-40070603 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 162

Conread position: 421-708
Cow position: chrX:23032855-23032574 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 28

Conread position: 421-800
Cow position: chrX:11461602-11461993 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 102, 175

Conread position: 421-800
Cow position: chrX:21389972-21389578 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 109, 158

Conread position: 421-800
Cow position: chrX:21793985-21793590 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 175

Conread position: 421-800
Cow position: chrX:29915952-29916346 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 153

Conread position: 421-800
Cow position: chrX:35024449-35024069 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 422-800
Cow position: chrX:8482832-8482448 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 124

Conread position: 424-791
Cow position: chrX:16325138-16325521 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 426-796
Cow position: chrX:25146942-25146565 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 93, 15

Conread position: 427-800
Cow position: chrX:15121801-15122160 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 212, 34

Conread position: 427-800
Cow position: chrX:16808426-16808814 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 169

Conread position: 430-800
Cow position: chrX:11990766-11991151 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 95, 148

Conread position: 434-778
Cow position: chrX:37134256-37134611 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 96, 47

Conread position: 435-800
Cow position: chrX:28866637-28867015 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 55

Conread position: 436-794
Cow position: chrX:28557731-28557372 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 54

Conread position: 441-800
Cow position: chrX:33685505-33685131 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 155

Conread position: 442-800
Cow position: chrX:29892459-29892087 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 136

Conread position: 444-800
Cow position: chrX:33763509-33763145 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 128, 145

Conread position: 445-800
Cow position: chrX:26447449-26447092 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 75, 134

Conread position: 457-800
Cow position: chrX:619901-620264 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 62, 127

Conread position: 461-778
Cow position: chrX:21662390-21662064 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 118

Conread position: 462-800
Cow position: chrX:26230405-26230758 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 134

Conread position: 464-800
Cow position: chrX:21818130-21818455 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 86, 69

Conread position: 464-800
Cow position: chrX:25573695-25573352 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 112

Conread position: 468-800
Cow position: chrX:5361357-5361010 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 58, 128

Conread position: 472-631
Cow position: chrX:17743390-17743229 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 106

Conread position: 481-794
Cow position: chrX:28646945-28647264 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 162, 60

Conread position: 500-800
Cow position: chrX:43075190-43074883 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 504-787
Cow position: chrX:22308266-22308553 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 75

Conread position: 504-800
Cow position: chrX:8400253-8400549 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 75

Conread position: 509-800
Cow position: chrX:28058619-28058322 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 15

Conread position: 512-786
Cow position: chrX:28133392-28133114 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 125, 74

Conread position: 512-800
Cow position: chrX:4767987-4767696 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 61

Conread position: 513-793
Cow position: chrX:26437020-26436738 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 64

Conread position: 515-800
Cow position: chrX:730032-730324 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 74

Conread position: 520-794
Cow position: chrX:4407170-4406889 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 16

Conread position: 521-798
Cow position: chrX:21626408-21626696 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 177

Conread position: 522-793
Cow position: chrX:150758-150487 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 51

Conread position: 522-797
Cow position: chrX:32063885-32064165 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 56

Conread position: 522-800
Cow position: chrX:7485093-7484807 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 67

Conread position: 522-800
Cow position: chrX:16085372-16085658 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 67

Conread position: 522-800
Cow position: chrX:17290466-17290183 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 67

Conread position: 522-800
Cow position: chrX:18023706-18023992 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 67

Conread position: 522-800
Cow position: chrX:22838558-22838272 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 67

Conread position: 522-800
Cow position: chrX:30964700-30964986 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 67

Conread position: 523-698
Cow position: chrX:4130302-4130476 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 49

Conread position: 523-787
Cow position: chrX:24317108-24316835 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 53

Conread position: 523-788
Cow position: chrX:22118211-22118482 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 110, 32

Conread position: 523-791
Cow position: chrX:35287710-35287436 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 49

Conread position: 523-792
Cow position: chrX:28605811-28606077 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 198, 49

Conread position: 523-794
Cow position: chrX:45373822-45374101 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 53

Conread position: 523-800
Cow position: chrX:12290007-12289730 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 52

Conread position: 523-800
Cow position: chrX:15993729-15993445 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 42

Conread position: 523-800
Cow position: chrX:29288279-29287998 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 523-800
Cow position: chrX:29766285-29765996 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 59

Conread position: 524-800
Cow position: chrX:25817537-25817817 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 49

Conread position: 525-796
Cow position: chrX:6235571-6235844 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 51

Conread position: 525-800
Cow position: chrX:3144911-3144629 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 38

Conread position: 525-800
Cow position: chrX:31804170-31803889 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 169, 49

Conread position: 525-800
Cow position: chrX:33537858-33537584 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 187, 47

Conread position: 526-794
Cow position: chrX:20675151-20674874 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 532-800
Cow position: chrX:24346325-24346049 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 57

Conread position: 533-800
Cow position: chrX:20792411-20792139 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 177, 39

Conread position: 534-800
Cow position: chrX:3155311-3155581 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 146, 38

Conread position: 534-800
Cow position: chrX:26622548-26622808 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 99, 38

Conread position: 535-800
Cow position: chrX:40184345-40184073 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 6

Conread position: 545-796
Cow position: chrX:22809516-22809268 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 27

Conread position: 545-798
Cow position: chrX:47380237-47380502 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 27

Conread position: 545-800
Cow position: chrX:26618387-26618124 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 44

Conread position: 551-800
Cow position: chrX:39698018-39697766 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 31

Conread position: 554-793
Cow position: chrX:6655782-6656011 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 161, 18

Conread position: 582-792
Cow position: chrX:44874275-44874492 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 8

Conread position: 586-767
Cow position: chrX:23221818-23222009 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 591-800
Cow position: chrX:7120827-7120607 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 591-800
Cow position: chrX:9095862-9095643 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 29

Conread position: 591-800
Cow position: chrX:9763851-9764071 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 591-800
Cow position: chrX:16803647-16803867 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 591-800
Cow position: chrX:27498049-27497830 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 185

Conread position: 599-800
Cow position: chrX:32329420-32329209 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 83

Conread position: 601-793
Cow position: chrX:158820-158617 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 56

Conread position: 602-800
Cow position: chrX:5375068-5375277 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 604-800
Cow position: chrX:9261614-9261414 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 73

Conread position: 621-800
Cow position: chrX:40827921-40828106 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 627-800
Cow position: chrX:24321444-24321628 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 631-800
Cow position: chrX:12996732-12996910 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 643-794
Cow position: chrX:20742019-20741859 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 645-794
Cow position: chrX:21750081-21750236 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 653-800
Cow position: chrX:28765952-28766108 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Show alignments to all cow chromosomes.