Cow genome map

Conread name: Liv1-LVRM10001H11

Conread position: 1-128
Cow position: chr1:82556303-82556427 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-298
Cow position: chr1:61012422-61012125 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 131

Conread position: 1-379
Cow position: chr1:81355594-81355968 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 206

Conread position: 2-212
Cow position: chr1:19226949-19227157 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 173, 143

Conread position: 2-222
Cow position: chr1:7023229-7023008 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 146, 136

Conread position: 2-234
Cow position: chr1:20104374-20104144 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 173, 146

Conread position: 2-243
Cow position: chr1:78838903-78838665 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 2-330
Cow position: chr1:98461394-98461074 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 125, 138

Conread position: 2-344
Cow position: chr1:49433156-49433494 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 173, 128

Conread position: 2-373
Cow position: chr1:39068848-39069210 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 145

Conread position: 2-375
Cow position: chr1:41252302-41252664 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 62

Conread position: 2-375
Cow position: chr1:54478437-54478061 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 275

Conread position: 2-378
Cow position: chr1:53398083-53397720 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 125

Conread position: 3-221
Cow position: chr1:65028641-65028418 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 3-249
Cow position: chr1:89230124-89230367 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 142, 58

Conread position: 3-272
Cow position: chr1:3882352-3882627 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 149, 0

Conread position: 3-313
Cow position: chr1:24542463-24542781 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 115, 258

Conread position: 3-332
Cow position: chr1:49317389-49317731 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 133, 140

Conread position: 3-368
Cow position: chr1:3720337-3720680 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 172, 29

Conread position: 3-376
Cow position: chr1:82936490-82936844 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 3-376
Cow position: chr1:101714224-101713854 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 57

Conread position: 3-378
Cow position: chr1:81568921-81569300 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 159

Conread position: 3-378
Cow position: chr1:81613496-81613121 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 154

Conread position: 3-379
Cow position: chr1:22729163-22728783 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 376

Conread position: 4-378
Cow position: chr1:635299-634927 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 9

Conread position: 4-381
Cow position: chr1:45288765-45289140 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 144

Conread position: 5-134
Cow position: chr1:41027179-41027051 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 5-163
Cow position: chr1:46143357-46143515 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 128, 59

Conread position: 5-163
Cow position: chr1:81481277-81481437 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 5-167
Cow position: chr1:77232473-77232630 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 5-168
Cow position: chr1:79146714-79146879 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 139, 47

Conread position: 5-174
Cow position: chr1:79004076-79003910 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 143, 27

Conread position: 5-222
Cow position: chr1:23998831-23999033 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 5-246
Cow position: chr1:18780224-18780470 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 79, 103

Conread position: 5-248
Cow position: chr1:85549973-85550216 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 141

Conread position: 5-248
Cow position: chr1:89449005-89448759 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 143, 0

Conread position: 5-257
Cow position: chr1:91023362-91023615 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 86

Conread position: 5-262
Cow position: chr1:64572620-64572361 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 135, 0

Conread position: 5-264
Cow position: chr1:17196522-17196783 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 231

Conread position: 5-267
Cow position: chr1:97090431-97090167 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 132, 125

Conread position: 5-270
Cow position: chr1:78097032-78096776 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 171

Conread position: 5-272
Cow position: chr1:45553138-45553393 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 65

Conread position: 5-278
Cow position: chr1:12978787-12978512 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 125, 140

Conread position: 5-278
Cow position: chr1:88913424-88913149 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 137, 50

Conread position: 5-278
Cow position: chr1:101632232-101632508 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 143, 130

Conread position: 5-290
Cow position: chr1:89388449-89388155 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 178

Conread position: 5-293
Cow position: chr1:24581681-24581399 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 110, 82

Conread position: 5-294
Cow position: chr1:90621400-90621695 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 158

Conread position: 5-306
Cow position: chr1:83072546-83072251 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 171

Conread position: 5-307
Cow position: chr1:58754692-58754978 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 142, 60

Conread position: 5-308
Cow position: chr1:96276946-96277249 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 66

Conread position: 5-317
Cow position: chr1:12464559-12464867 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 142, 127

Conread position: 5-317
Cow position: chr1:62036907-62036597 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 135

Conread position: 5-319
Cow position: chr1:42175832-42175517 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 104

Conread position: 5-322
Cow position: chr1:100393058-100393373 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 122

Conread position: 5-323
Cow position: chr1:62291596-62291895 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 170, 58

Conread position: 5-337
Cow position: chr1:98031027-98030691 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 13

Conread position: 5-343
Cow position: chr1:55705138-55705483 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 5-343
Cow position: chr1:89381380-89381049 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 138, 112

Conread position: 5-346
Cow position: chr1:43388947-43389280 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 59

Conread position: 5-354
Cow position: chr1:51445991-51445639 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 93

Conread position: 5-358
Cow position: chr1:56618550-56618921 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 174, 38

Conread position: 5-360
Cow position: chr1:84811834-84812183 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 5-361
Cow position: chr1:70538716-70538356 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 5-364
Cow position: chr1:50930874-50931219 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 59

Conread position: 5-365
Cow position: chr1:5135605-5135942 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 144, 98

Conread position: 5-365
Cow position: chr1:70380038-70380397 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 98

Conread position: 5-365
Cow position: chr1:71253451-71253806 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 54

Conread position: 5-366
Cow position: chr1:3923695-3924046 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 127

Conread position: 5-366
Cow position: chr1:92197558-92197208 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 136, 59

Conread position: 5-367
Cow position: chr1:47233373-47233728 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 126

Conread position: 5-368
Cow position: chr1:70435103-70434738 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 85

Conread position: 5-370
Cow position: chr1:45555470-45555106 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 7

Conread position: 5-372
Cow position: chr1:4291269-4290900 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 59

Conread position: 5-374
Cow position: chr1:61885018-61884655 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 126

Conread position: 5-374
Cow position: chr1:68817694-68818056 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 59

Conread position: 5-375
Cow position: chr1:196900-197263 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 180

Conread position: 5-375
Cow position: chr1:22827263-22826909 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 163

Conread position: 5-375
Cow position: chr1:37321897-37322267 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 59

Conread position: 5-375
Cow position: chr1:39509953-39510303 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 237, 139

Conread position: 5-375
Cow position: chr1:43505634-43505262 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 258

Conread position: 5-375
Cow position: chr1:44125533-44125898 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 120, 59

Conread position: 5-375
Cow position: chr1:48105331-48105695 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 46

Conread position: 5-375
Cow position: chr1:71295187-71295569 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 329

Conread position: 5-375
Cow position: chr1:75744967-75744597 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 259

Conread position: 5-375
Cow position: chr1:85774562-85774198 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 128

Conread position: 5-376
Cow position: chr1:29935282-29935641 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 98

Conread position: 5-376
Cow position: chr1:42887172-42887523 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 5-376
Cow position: chr1:61005458-61005828 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 50

Conread position: 5-377
Cow position: chr1:62964371-62964016 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 5-377
Cow position: chr1:79844570-79844206 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 125

Conread position: 5-377
Cow position: chr1:85029059-85028698 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 137

Conread position: 5-377
Cow position: chr1:89341875-89342252 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 254

Conread position: 5-377
Cow position: chr1:93499725-93499359 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 5-377
Cow position: chr1:95499391-95499758 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 97

Conread position: 5-378
Cow position: chr1:10778668-10778310 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 127

Conread position: 5-378
Cow position: chr1:13637558-13637931 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 263

Conread position: 5-378
Cow position: chr1:24132958-24133319 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 59

Conread position: 5-378
Cow position: chr1:25383773-25383395 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 98

Conread position: 5-378
Cow position: chr1:35162515-35162140 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 147

Conread position: 5-378
Cow position: chr1:41056783-41056420 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 124

Conread position: 5-378
Cow position: chr1:52039741-52039373 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 58

Conread position: 5-378
Cow position: chr1:54206711-54207080 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 65

Conread position: 5-378
Cow position: chr1:56225574-56225213 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 247

Conread position: 5-378
Cow position: chr1:61741863-61742232 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 5-378
Cow position: chr1:63434701-63435067 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 128

Conread position: 5-378
Cow position: chr1:64678800-64678433 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 5-378
Cow position: chr1:73960805-73960436 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 36

Conread position: 5-378
Cow position: chr1:81290611-81290254 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 61

Conread position: 5-378
Cow position: chr1:88652741-88652367 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 157

Conread position: 5-378
Cow position: chr1:89350070-89349713 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 238

Conread position: 5-378
Cow position: chr1:89509816-89510196 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 141

Conread position: 5-378
Cow position: chr1:97954363-97954712 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 287, 126

Conread position: 5-378
Cow position: chr1:98551824-98551453 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 7

Conread position: 5-378
Cow position: chr1:99642264-99642634 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 132, 99

Conread position: 5-379
Cow position: chr1:8720-8357 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 128, 141

Conread position: 5-379
Cow position: chr1:22730839-22730497 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 5-379
Cow position: chr1:72304284-72304636 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 5-379
Cow position: chr1:82884290-82884650 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 5-379
Cow position: chr1:84255872-84255488 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 5-379
Cow position: chr1:95177042-95176670 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 13

Conread position: 5-381
Cow position: chr1:57575659-57576029 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 128

Conread position: 6-222
Cow position: chr1:10716600-10716390 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 133, 58

Conread position: 6-332
Cow position: chr1:93044121-93043807 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 78

Conread position: 6-354
Cow position: chr1:71078856-71079193 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 132

Conread position: 6-358
Cow position: chr1:56635202-56634852 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 109

Conread position: 6-364
Cow position: chr1:81563849-81563483 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 117

Conread position: 7-263
Cow position: chr1:41115616-41115868 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 52

Conread position: 7-276
Cow position: chr1:86110641-86110898 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 168, 54

Conread position: 7-375
Cow position: chr1:67821120-67821471 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 97

Conread position: 7-378
Cow position: chr1:68253698-68253327 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 246

Conread position: 7-381
Cow position: chr1:100706229-100705865 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 168, 57

Conread position: 10-270
Cow position: chr1:80311544-80311310 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 11-348
Cow position: chr1:70227593-70227936 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 118

Conread position: 11-365
Cow position: chr1:14379448-14379781 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 76

Conread position: 11-378
Cow position: chr1:73545810-73546179 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 104

Conread position: 11-379
Cow position: chr1:40600143-40599787 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 7

Conread position: 17-282
Cow position: chr1:69127073-69127335 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 122

Conread position: 17-313
Cow position: chr1:84905970-84906267 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 187

Conread position: 17-333
Cow position: chr1:85867682-85867375 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 158, 111

Conread position: 17-341
Cow position: chr1:7186881-7186560 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 120

Conread position: 17-350
Cow position: chr1:4539329-4539675 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 153

Conread position: 17-378
Cow position: chr1:61735342-61735703 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 147

Conread position: 17-378
Cow position: chr1:70297371-70297004 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 113, 182

Conread position: 17-378
Cow position: chr1:78092130-78091768 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 253

Conread position: 17-378
Cow position: chr1:92436897-92437255 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 47

Conread position: 17-381
Cow position: chr1:91816678-91817040 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 182

Conread position: 18-263
Cow position: chr1:86682468-86682716 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 127, 112

Conread position: 18-263
Cow position: chr1:87197912-87197674 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 124, 154

Conread position: 18-336
Cow position: chr1:3166984-3167295 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 44

Conread position: 18-356
Cow position: chr1:41697147-41696815 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 42

Conread position: 18-364
Cow position: chr1:10633138-10632803 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 161, 114

Conread position: 18-365
Cow position: chr1:78811130-78810785 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 85

Conread position: 19-378
Cow position: chr1:51981313-51980963 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 118

Conread position: 20-274
Cow position: chr1:49077241-49077507 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 110

Conread position: 22-375
Cow position: chr1:1981025-1981371 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 180

Conread position: 23-221
Cow position: chr1:61542832-61543029 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 47

Conread position: 23-241
Cow position: chr1:79640201-79640421 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 125, 199

Conread position: 23-263
Cow position: chr1:43703496-43703254 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 107

Conread position: 23-265
Cow position: chr1:42545692-42545939 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 110, 234

Conread position: 23-269
Cow position: chr1:101946627-101946866 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 158, 109

Conread position: 23-273
Cow position: chr1:93554923-93554680 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 194, 123

Conread position: 23-293
Cow position: chr1:20667655-20667921 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 109, 124

Conread position: 23-298
Cow position: chr1:75933353-75933088 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 38

Conread position: 23-330
Cow position: chr1:34771416-34771720 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 123, 113

Conread position: 23-333
Cow position: chr1:11729262-11728958 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 158, 109

Conread position: 23-333
Cow position: chr1:26702120-26702427 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 46

Conread position: 23-345
Cow position: chr1:59519002-59518670 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 39

Conread position: 23-347
Cow position: chr1:97611573-97611886 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 191, 146

Conread position: 23-361
Cow position: chr1:52995112-52994777 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 171

Conread position: 23-365
Cow position: chr1:95215103-95215437 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 105

Conread position: 23-366
Cow position: chr1:78857242-78857575 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 113

Conread position: 23-372
Cow position: chr1:90868354-90868694 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 124

Conread position: 23-373
Cow position: chr1:72011726-72012062 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 152, 104

Conread position: 23-374
Cow position: chr1:37309432-37309764 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 107, 128

Conread position: 23-374
Cow position: chr1:81868642-81868987 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 109, 123

Conread position: 23-375
Cow position: chr1:52435359-52435009 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 115

Conread position: 23-375
Cow position: chr1:83748029-83747682 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 111, 41

Conread position: 23-376
Cow position: chr1:39418024-39418380 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 103, 114

Conread position: 23-378
Cow position: chr1:101634799-101634437 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 80

Conread position: 23-379
Cow position: chr1:72285981-72286314 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 24-309
Cow position: chr1:6788197-6788485 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 105

Conread position: 24-323
Cow position: chr1:90976002-90976292 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 106

Conread position: 24-347
Cow position: chr1:10942008-10942325 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 108, 142

Conread position: 24-347
Cow position: chr1:10964378-10964061 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 108, 142

Conread position: 24-359
Cow position: chr1:44507059-44506722 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 244

Conread position: 24-367
Cow position: chr1:5023676-5023993 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 318, 109

Conread position: 24-372
Cow position: chr1:69539777-69539441 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 157, 106

Conread position: 24-375
Cow position: chr1:26688387-26688737 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 227
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 104, 18

Conread position: 24-378
Cow position: chr1:69264894-69264558 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 126, 65

Conread position: 25-277
Cow position: chr1:74927970-74927713 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 158

Conread position: 25-288
Cow position: chr1:7748299-7748038 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 5, 90

Conread position: 25-288
Cow position: chr1:7752465-7752204 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 90

Conread position: 25-299
Cow position: chr1:484381-484651 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 122

Conread position: 25-309
Cow position: chr1:21955287-21955569 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 79

Conread position: 25-343
Cow position: chr1:16961924-16962244 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 5, 121

Conread position: 25-343
Cow position: chr1:89076547-89076865 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 5, 90

Conread position: 25-344
Cow position: chr1:64804016-64804338 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 140

Conread position: 25-373
Cow position: chr1:31934593-31934254 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 5, 105

Conread position: 25-375
Cow position: chr1:22836488-22836141 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 158

Conread position: 25-376
Cow position: chr1:874740-874381 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 112

Conread position: 25-376
Cow position: chr1:4374251-4374600 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 108

Conread position: 25-378
Cow position: chr1:1878106-1877763 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 100

Conread position: 25-381
Cow position: chr1:21577895-21577538 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 120

Conread position: 26-272
Cow position: chr1:85647696-85647944 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 106

Conread position: 26-298
Cow position: chr1:92369822-92369544 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 26-360
Cow position: chr1:83582849-83583186 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 120

Conread position: 26-375
Cow position: chr1:20384539-20384882 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 55

Conread position: 29-180
Cow position: chr1:80584511-80584361 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 29-287
Cow position: chr1:57297563-57297296 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 101, 246

Conread position: 29-314
Cow position: chr1:63138922-63138638 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 146, 101

Conread position: 29-324
Cow position: chr1:99512184-99512463 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 187, 114

Conread position: 29-349
Cow position: chr1:55230057-55229749 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 189, 99

Conread position: 29-359
Cow position: chr1:6077972-6077649 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 50

Conread position: 29-361
Cow position: chr1:53520992-53520659 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 116

Conread position: 29-362
Cow position: chr1:56477673-56477347 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 108, 189

Conread position: 29-364
Cow position: chr1:36932235-36931909 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 63

Conread position: 29-372
Cow position: chr1:38277947-38278303 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 91, 123

Conread position: 29-372
Cow position: chr1:46693573-46693914 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 134

Conread position: 29-377
Cow position: chr1:72068754-72069090 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 97, 225

Conread position: 29-378
Cow position: chr1:80336168-80336514 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 188, 100

Conread position: 29-378
Cow position: chr1:89835332-89834971 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 19

Conread position: 29-378
Cow position: chr1:94875593-94875942 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 107

Conread position: 29-379
Cow position: chr1:81228252-81228596 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 144

Conread position: 29-381
Cow position: chr1:63595973-63596328 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 101

Conread position: 30-254
Cow position: chr1:8128887-8129111 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 104

Conread position: 30-331
Cow position: chr1:26178731-26179032 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 145

Conread position: 30-361
Cow position: chr1:92963475-92963151 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 72

Conread position: 30-372
Cow position: chr1:91800520-91800866 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 31

Conread position: 30-378
Cow position: chr1:20205107-20204761 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 31-173
Cow position: chr1:61560644-61560789 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 32-309
Cow position: chr1:89498031-89497770 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 23

Conread position: 34-248
Cow position: chr1:92996815-92997037 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 95, 127

Conread position: 35-265
Cow position: chr1:33409550-33409783 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 95, 82

Conread position: 35-290
Cow position: chr1:95179029-95178774 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 94

Conread position: 35-346
Cow position: chr1:3429434-3429741 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 80, 144

Conread position: 35-376
Cow position: chr1:11772010-11772343 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 144, 93

Conread position: 36-246
Cow position: chr1:101860416-101860625 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 28

Conread position: 36-251
Cow position: chr1:87440541-87440327 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 9

Conread position: 36-273
Cow position: chr1:77683426-77683194 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 78

Conread position: 36-375
Cow position: chr1:74822521-74822190 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 37-229
Cow position: chr1:261409-261598 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 27

Conread position: 37-361
Cow position: chr1:7350621-7350291 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 37-375
Cow position: chr1:80900193-80899847 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 311

Conread position: 37-378
Cow position: chr1:11226173-11226509 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 92

Conread position: 38-278
Cow position: chr1:57420659-57420895 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 141, 76

Conread position: 38-302
Cow position: chr1:42398119-42398385 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 232

Conread position: 38-309
Cow position: chr1:57945802-57946082 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 38-317
Cow position: chr1:86279485-86279211 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 80, 62

Conread position: 38-332
Cow position: chr1:70422376-70422082 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 131, 74

Conread position: 38-365
Cow position: chr1:42360358-42360015 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 138

Conread position: 38-375
Cow position: chr1:48581201-48580869 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 141, 100

Conread position: 38-377
Cow position: chr1:47658417-47658092 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 119, 105

Conread position: 38-378
Cow position: chr1:34300479-34300812 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 93

Conread position: 38-378
Cow position: chr1:53374505-53374171 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 111

Conread position: 38-378
Cow position: chr1:96365733-96365410 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 262, 26

Conread position: 38-378
Cow position: chr1:101916238-101915905 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 137, 95

Conread position: 38-379
Cow position: chr1:12222535-12222870 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 131, 91

Conread position: 38-379
Cow position: chr1:33996852-33997177 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 39-378
Cow position: chr1:42256431-42256774 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 94

Conread position: 40-358
Cow position: chr1:88618666-88618348 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 207

Conread position: 40-378
Cow position: chr1:101822443-101822760 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 135, 21

Conread position: 41-372
Cow position: chr1:54258636-54258309 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 137

Conread position: 48-378
Cow position: chr1:60907439-60907097 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 99, 0

Conread position: 49-353
Cow position: chr1:26729779-26729489 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 80

Conread position: 52-378
Cow position: chr1:44155308-44154998 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 27, 116

Conread position: 52-378
Cow position: chr1:83083066-83082741 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 220

Conread position: 53-274
Cow position: chr1:89508606-89508392 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 83

Conread position: 54-378
Cow position: chr1:99136374-99136694 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 46

Conread position: 63-378
Cow position: chr1:43379977-43380293 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 138

Conread position: 66-290
Cow position: chr1:80631743-80631522 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 85

Conread position: 69-248
Cow position: chr1:40069277-40069104 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 74

Conread position: 72-299
Cow position: chr1:99039317-99039538 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 30

Conread position: 72-374
Cow position: chr1:12870971-12871267 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 89

Conread position: 72-374
Cow position: chr1:57635500-57635207 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 107, 166

Conread position: 72-376
Cow position: chr1:22448543-22448846 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 71, 186

Conread position: 72-378
Cow position: chr1:52329480-52329792 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 188

Conread position: 72-378
Cow position: chr1:95017491-95017777 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 73-379
Cow position: chr1:76222651-76222956 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 131

Conread position: 77-374
Cow position: chr1:57263959-57264246 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 176

Conread position: 84-361
Cow position: chr1:29671495-29671771 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 103

Conread position: 84-378
Cow position: chr1:80870141-80869842 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 61

Conread position: 86-378
Cow position: chr1:666390-666096 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 89, 177

Conread position: 87-374
Cow position: chr1:63905451-63905732 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 94, 58

Conread position: 88-266
Cow position: chr1:85826369-85826190 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 165

Conread position: 89-319
Cow position: chr1:84170497-84170282 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 90-379
Cow position: chr1:77099527-77099805 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 88

Conread position: 91-378
Cow position: chr1:71946351-71946634 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 138

Conread position: 93-378
Cow position: chr1:33811941-33811670 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 33

Conread position: 94-375
Cow position: chr1:12595885-12596164 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 38

Conread position: 95-365
Cow position: chr1:57900726-57900992 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 37

Conread position: 105-301
Cow position: chr1:89083110-89082920 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 76, 32

Conread position: 118-306
Cow position: chr1:102113115-102113301 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 12

Conread position: 120-275
Cow position: chr1:31960215-31960059 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 13

Conread position: 124-371
Cow position: chr1:44165072-44164822 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 43

Conread position: 151-378
Cow position: chr1:21093052-21092827 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 100

Conread position: 180-332
Cow position: chr1:14981191-14981337 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 180-354
Cow position: chr1:30504401-30504231 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 180-374
Cow position: chr1:31414031-31414221 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 183, 69

Conread position: 180-378
Cow position: chr1:55686287-55686483 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 184-348
Cow position: chr1:99543123-99543283 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 185-324
Cow position: chr1:99792740-99792601 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 124
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.