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Cow genome map

           
Conread name:
           
Liv1-LVRM10001H11
        

               
Conread position:
               
2-167
               

               
Cow position:
               
chr16:11134878-11135045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
139, 130
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr16:34220289-34220093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr16:21761867-21762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
146, 101
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr16:41578329-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 121
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr16:54709937-54710172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr16:3047239-3047550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr16:42444259-42443935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 127
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr16:13195237-13195585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr16:16597660-16597304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 122
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr16:26372848-26373210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr16:14754220-14754586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr16:7076015-7075652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr16:23738284-23737916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 161
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr16:7499153-7498799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
169, 60
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr16:9985290-9985659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 127
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr16:27659643-27660030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr16:9553159-9552992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr16:9905191-9904955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
172, 6
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr16:39401914-39402151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr16:15504419-15504750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 14
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:18757737-18758070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 100
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr16:48340592-48340957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 220
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr16:50417594-50417960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
5-111
               

               
Cow position:
               
chr16:34204964-34205070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-128
               

               
Cow position:
               
chr16:32893728-32893605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-134
               

               
Cow position:
               
chr16:21370090-21370216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr16:17291922-17292061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr16:40700637-40700808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr16:3114639-3114454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 125
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr16:21040127-21039929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
132, 159
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr16:19052735-19052535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr16:40514382-40514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
170, 127
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr16:45122135-45121930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
174, 128
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr16:11940137-11939928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 106
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr16:17903545-17903766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr16:54226500-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr16:22207178-22206958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr16:34753860-34754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr16:8738165-8737936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr16:12320321-12320065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
143, 165
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr16:33198339-33198591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:25387073-25386819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 69
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr16:20069932-20069658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
101, 97
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr16:7550067-7549797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr16:3304123-3303862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr16:31078991-31079272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 170
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr16:31348666-31348942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr16:47964719-47964998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
164, 124
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr16:5836685-5836404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr16:17945621-17945338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
139, 211
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr16:17289047-17288754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 267
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr16:6344342-6344630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 55
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr16:24855639-24855344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr16:41696992-41697289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 124
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr16:45678078-45677774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 170
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr16:27160764-27161068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 159
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr16:8068723-8069030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr16:39172048-39172377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr16:45676763-45677069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
178, 65
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr16:52170155-52169848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 107
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr16:22773079-22772744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 152
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr16:14125236-14124931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
170, 19
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr16:31117515-31117846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr16:48190913-48191231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 19
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr16:25839720-25839382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 299
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr16:11806772-11806435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr16:33704905-33704547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr16:19408428-19408765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
176, 122
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:8933328-8933673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:11615145-11615482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:26649529-26649887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 337
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:40562332-40561972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 142
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr16:23472849-23472493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 133
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr16:56231927-56231565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 122
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr16:48398154-48398509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 178
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr16:5257096-5256738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 174
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr16:37669637-37669994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 254
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr16:13306772-13307130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr16:47518946-47518582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr16:53086241-53086591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr16:570820-571185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr16:5636684-5636321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr16:4626291-4626663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 342
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr16:4857002-4857359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr16:48494454-48494825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 211
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr16:48956898-48956534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr16:50688621-50688257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr16:3634216-3633843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
113, 166
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr16:33646115-33645744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 163
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:7136245-7136621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 264
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:7505184-7504829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:9973399-9973773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 129
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:13689766-13689392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 247
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:25170493-25170120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 234
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:39474052-39474409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 125
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:42078748-42079110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:47820667-47820300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:48095665-48096034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 125
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:51501029-51500661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
160, 50
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:6379025-6379384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 59
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:15960190-15960566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 127
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:18353858-18354223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:19643989-19643623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 165
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:22804498-22804853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 107
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:35188349-35187982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr16:52834788-52835153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 171
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr16:48006393-48006769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 121
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr16:46433226-46433515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 214
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr16:54579265-54578901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr16:13990074-13989715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 123
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr16:29655424-29655054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
208, 146
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr16:17282756-17282483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 57
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chr16:45554541-45554238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr16:5363999-5363638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr16:30715602-30715221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
9-148
               

               
Cow position:
               
chr16:17460264-17460124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr16:11105650-11105323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr16:45610082-45609712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
11-365
               

               
Cow position:
               
chr16:3246111-3246450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 121
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr16:53428353-53427986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr16:50873076-50873426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
12-365
               

               
Cow position:
               
chr16:5096038-5095708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
16-167
               

               
Cow position:
               
chr16:30305726-30305877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
17-199
               

               
Cow position:
               
chr16:4970973-4970788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
120, 113
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr16:19047346-19047575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr16:6887362-6887633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
17-306
               

               
Cow position:
               
chr16:16552649-16552363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
93, 150
               

               
Conread position:
               
17-341
               

               
Cow position:
               
chr16:39695395-39695711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr16:601033-600695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
17-358
               

               
Cow position:
               
chr16:9729283-9728953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
201, 140
               

               
Conread position:
               
17-375
               

               
Cow position:
               
chr16:44744045-44744400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 254
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr16:31978098-31978459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr16:46752183-46752550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
130, 183
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr16:54298556-54298209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
145, 125
               

               
Conread position:
               
17-379
               

               
Cow position:
               
chr16:675578-675222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
121, 152
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr16:591724-592007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr16:12060503-12060201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr16:47643501-47643200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 140
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr16:8812008-8812323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr16:238354-238007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
18-365
               

               
Cow position:
               
chr16:39513989-39514337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr16:39394656-39394312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 115
               

               
Conread position:
               
18-375
               

               
Cow position:
               
chr16:11791097-11790745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 46
               

               
Conread position:
               
18-376
               

               
Cow position:
               
chr16:31122163-31122519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
19-313
               

               
Cow position:
               
chr16:55784666-55784967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
22-375
               

               
Cow position:
               
chr16:8366745-8367093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
23-274
               

               
Cow position:
               
chr16:14974462-14974703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
23-297
               

               
Cow position:
               
chr16:41530218-41530481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
23-298
               

               
Cow position:
               
chr16:424731-425006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 109
               

               
Conread position:
               
23-311
               

               
Cow position:
               
chr16:4275658-4275950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
23-313
               

               
Cow position:
               
chr16:11957496-11957790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 257
               

               
Conread position:
               
23-317
               

               
Cow position:
               
chr16:53830510-53830799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 82
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr16:43105434-43105738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr16:50289234-50288932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
125, 242
               

               
Conread position:
               
23-345
               

               
Cow position:
               
chr16:49229686-49230006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
117, 144
               

               
Conread position:
               
23-346
               

               
Cow position:
               
chr16:36203536-36203854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
23-358
               

               
Cow position:
               
chr16:42340278-42339951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
23-368
               

               
Cow position:
               
chr16:46552876-46552560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
23-371
               

               
Cow position:
               
chr16:11102739-11103090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 266
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr16:12633966-12633637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
148, 122
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr16:45139748-45139403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr16:820332-819980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 230
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr16:4399817-4399450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr16:33226457-33226803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
24-275
               

               
Cow position:
               
chr16:52133436-52133687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 114
               

               
Conread position:
               
24-326
               

               
Cow position:
               
chr16:8322901-8323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
24-332
               

               
Cow position:
               
chr16:20633795-20634103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
24-341
               

               
Cow position:
               
chr16:5896499-5896185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
24-353
               

               
Cow position:
               
chr16:32327739-32327406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 142
               

               
Conread position:
               
24-375
               

               
Cow position:
               
chr16:8315112-8315441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
24-376
               

               
Cow position:
               
chr16:13611373-13611714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr16:18141246-18141600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr16:53508904-53509259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
24-379
               

               
Cow position:
               
chr16:18402768-18402424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 229
               

               
Conread position:
               
25-298
               

               
Cow position:
               
chr16:20205542-20205261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr16:45457043-45456756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 105
               

               
Conread position:
               
25-340
               

               
Cow position:
               
chr16:26676605-26676923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
25-358
               

               
Cow position:
               
chr16:38905153-38905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
25-361
               

               
Cow position:
               
chr16:35623170-35623504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
25-372
               

               
Cow position:
               
chr16:17745917-17745569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 198
               

               
Conread position:
               
25-375
               

               
Cow position:
               
chr16:17143014-17142670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 113
               

               
Conread position:
               
25-375
               

               
Cow position:
               
chr16:53891706-53892048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr16:16236044-16236399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 125
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr16:23871569-23871923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
26-173
               

               
Cow position:
               
chr16:29527908-29527755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
26-355
               

               
Cow position:
               
chr16:29557552-29557879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 38
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr16:29608588-29608247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
27-273
               

               
Cow position:
               
chr16:50521556-50521308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
28-380
               

               
Cow position:
               
chr16:9933235-9932881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr16:48146584-48146789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
29-319
               

               
Cow position:
               
chr16:594148-594441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
118, 96
               

               
Conread position:
               
29-347
               

               
Cow position:
               
chr16:10148358-10148041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 237
               

               
Conread position:
               
29-357
               

               
Cow position:
               
chr16:13969294-13969629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chr16:13752056-13752377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 98
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr16:4059432-4059094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 213
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr16:3289084-3288762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr16:21450923-21450577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 219
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr16:52790130-52789791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr16:4902664-4902329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
118, 187
               

               
Conread position:
               
30-258
               

               
Cow position:
               
chr16:32970005-32970233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
30-363
               

               
Cow position:
               
chr16:43661525-43661197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
35-291
               

               
Cow position:
               
chr16:8076432-8076692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
35-326
               

               
Cow position:
               
chr16:10032709-10032409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
146, 241
               

               
Conread position:
               
35-352
               

               
Cow position:
               
chr16:46175982-46176284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
35-357
               

               
Cow position:
               
chr16:5654569-5654259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr16:35195543-35195869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr16:30290378-30290045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
131, 85
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr16:32587274-32586928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr16:34168656-34168324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
36-261
               

               
Cow position:
               
chr16:29712488-29712262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
36-319
               

               
Cow position:
               
chr16:22860700-22860971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
36-359
               

               
Cow position:
               
chr16:8279723-8280041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
36-366
               

               
Cow position:
               
chr16:37452545-37452875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 232
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr16:41752508-41752840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
36-375
               

               
Cow position:
               
chr16:52889342-52889678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr16:23729855-23730207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 310
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr16:13232881-13233182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 213
               

               
Conread position:
               
38-236
               

               
Cow position:
               
chr16:33267780-33267583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
38-290
               

               
Cow position:
               
chr16:38119383-38119632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
38-299
               

               
Cow position:
               
chr16:54084103-54083842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 228
               

               
Conread position:
               
38-312
               

               
Cow position:
               
chr16:38787327-38787055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 95
               

               
Conread position:
               
38-322
               

               
Cow position:
               
chr16:8065821-8066096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 105
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr16:52636317-52636604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
178, 107
               

               
Conread position:
               
38-346
               

               
Cow position:
               
chr16:56082298-56082599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
38-354
               

               
Cow position:
               
chr16:689442-689134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
112, 94
               

               
Conread position:
               
38-354
               

               
Cow position:
               
chr16:45702905-45703223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
38-365
               

               
Cow position:
               
chr16:24023230-24023557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
137, 93
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr16:49169314-49169647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 236
               

               
Conread position:
               
38-374
               

               
Cow position:
               
chr16:16548680-16548348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 102
               

               
Conread position:
               
38-377
               

               
Cow position:
               
chr16:4971960-4972295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 100
               

               
Conread position:
               
38-377
               

               
Cow position:
               
chr16:4981310-4981641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 218
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr16:1548811-1549145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 108
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr16:37380337-37379996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 194
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr16:39646612-39646289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr16:42217623-42217961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 115
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr16:35243515-35243182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 88
               

               
Conread position:
               
39-328
               

               
Cow position:
               
chr16:28694795-28694520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 81
               

               
Conread position:
               
40-307
               

               
Cow position:
               
chr16:52275064-52275330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 228
               

               
Conread position:
               
40-378
               

               
Cow position:
               
chr16:13698580-13698237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr16:10650824-10651057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
42-357
               

               
Cow position:
               
chr16:23058373-23058686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
94, 102
               

               
Conread position:
               
43-343
               

               
Cow position:
               
chr16:1725012-1725309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
43-374
               

               
Cow position:
               
chr16:14106704-14106379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 89
               

               
Conread position:
               
44-346
               

               
Cow position:
               
chr16:45047573-45047862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
51-261
               

               
Cow position:
               
chr16:8239813-8240023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
52-374
               

               
Cow position:
               
chr16:42092334-42092643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
72-295
               

               
Cow position:
               
chr16:53037600-53037812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
73-378
               

               
Cow position:
               
chr16:24148193-24147884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 271
               

               
Conread position:
               
81-347
               

               
Cow position:
               
chr16:35168756-35168485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
87-377
               

               
Cow position:
               
chr16:16424592-16424874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
90-371
               

               
Cow position:
               
chr16:39417105-39417373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr16:47620392-47620131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
105-376
               

               
Cow position:
               
chr16:15808968-15808707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
105-378
               

               
Cow position:
               
chr16:14028629-14028892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr16:23810888-23810679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
153-376
               

               
Cow position:
               
chr16:28267061-28267279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
180-348
               

               
Cow position:
               
chr16:33235208-33235376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-372
               

               
Cow position:
               
chr16:25484288-25484103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               
Show alignments to all cow chromosomes.