Cow genome map

Conread name: Liv1-LVRM10001H11

Conread position: 1-379
Cow position: chr18:12775715-12776077 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 143, 16

Conread position: 2-240
Cow position: chr18:48633845-48633623 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 2-318
Cow position: chr18:18592542-18592229 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 130

Conread position: 2-333
Cow position: chr18:42431542-42431866 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 176

Conread position: 2-361
Cow position: chr18:55787990-55787641 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 179, 50

Conread position: 2-369
Cow position: chr18:43283688-43284046 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 146, 25

Conread position: 2-374
Cow position: chr18:3158526-3158900 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 117

Conread position: 2-374
Cow position: chr18:25647179-25647548 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 49

Conread position: 2-378
Cow position: chr18:56166050-56165680 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 172, 79

Conread position: 3-221
Cow position: chr18:51594736-51594952 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 172, 129

Conread position: 4-374
Cow position: chr18:29356557-29356928 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 129

Conread position: 5-166
Cow position: chr18:32252102-32252264 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 121

Conread position: 5-167
Cow position: chr18:23630541-23630703 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 135, 59

Conread position: 5-173
Cow position: chr18:43796889-43797055 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 5-199
Cow position: chr18:31711495-31711694 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 182

Conread position: 5-199
Cow position: chr18:34834558-34834362 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 65

Conread position: 5-210
Cow position: chr18:25006427-25006628 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 178, 128

Conread position: 5-212
Cow position: chr18:2146513-2146726 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 171

Conread position: 5-222
Cow position: chr18:1571171-1571388 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 78

Conread position: 5-228
Cow position: chr18:20462628-20462851 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 129

Conread position: 5-232
Cow position: chr18:11578140-11577927 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 65

Conread position: 5-257
Cow position: chr18:51190533-51190777 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 146, 58

Conread position: 5-262
Cow position: chr18:8300083-8299822 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 139, 39

Conread position: 5-274
Cow position: chr18:18369295-18369566 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 79

Conread position: 5-289
Cow position: chr18:1954523-1954808 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 96

Conread position: 5-308
Cow position: chr18:10977145-10977444 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 5-318
Cow position: chr18:33008132-33007813 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 47

Conread position: 5-319
Cow position: chr18:47828884-47828585 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 170, 59

Conread position: 5-336
Cow position: chr18:11790987-11790678 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 59

Conread position: 5-342
Cow position: chr18:21768680-21768360 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 176, 82

Conread position: 5-345
Cow position: chr18:42432023-42432362 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 59

Conread position: 5-352
Cow position: chr18:30794492-30794157 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 59

Conread position: 5-356
Cow position: chr18:11691343-11691691 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 49

Conread position: 5-359
Cow position: chr18:25282488-25282839 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 59

Conread position: 5-365
Cow position: chr18:36230660-36231001 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 59

Conread position: 5-369
Cow position: chr18:50082191-50082540 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 125

Conread position: 5-370
Cow position: chr18:33299970-33299603 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 231

Conread position: 5-371
Cow position: chr18:12242340-12241994 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 143, 59

Conread position: 5-372
Cow position: chr18:22214554-22214189 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 146

Conread position: 5-374
Cow position: chr18:30341118-30341462 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 170, 76

Conread position: 5-374
Cow position: chr18:45903831-45904191 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 55

Conread position: 5-374
Cow position: chr18:51212249-51211883 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 47

Conread position: 5-375
Cow position: chr18:33159008-33158654 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 326, 88

Conread position: 5-376
Cow position: chr18:39875194-39875561 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 29

Conread position: 5-377
Cow position: chr18:44801823-44802185 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 178

Conread position: 5-377
Cow position: chr18:47512072-47511692 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 160

Conread position: 5-378
Cow position: chr18:3417224-3416869 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 5-378
Cow position: chr18:4884454-4884818 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 13

Conread position: 5-378
Cow position: chr18:6881289-6881641 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 5-378
Cow position: chr18:7952269-7951899 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 82

Conread position: 5-378
Cow position: chr18:9010774-9010429 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 169, 98

Conread position: 5-378
Cow position: chr18:9089765-9089402 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 59

Conread position: 5-378
Cow position: chr18:9365987-9365609 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 5-378
Cow position: chr18:9974262-9974628 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 122

Conread position: 5-378
Cow position: chr18:10656505-10656143 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 164

Conread position: 5-378
Cow position: chr18:19620008-19619644 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 121

Conread position: 5-378
Cow position: chr18:28101698-28101323 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 33

Conread position: 5-378
Cow position: chr18:35012251-35012609 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 0

Conread position: 5-378
Cow position: chr18:37002698-37002327 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 139

Conread position: 5-378
Cow position: chr18:45571078-45570718 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 25

Conread position: 5-378
Cow position: chr18:47183227-47183588 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 113

Conread position: 5-378
Cow position: chr18:49100302-49100675 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 261

Conread position: 5-378
Cow position: chr18:55000676-55001042 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 40

Conread position: 5-378
Cow position: chr18:55505470-55505098 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 45

Conread position: 5-379
Cow position: chr18:28657845-28658218 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 125

Conread position: 5-379
Cow position: chr18:29058435-29058799 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 5-381
Cow position: chr18:10954532-10954168 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 50

Conread position: 5-381
Cow position: chr18:11867406-11867045 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 153

Conread position: 5-381
Cow position: chr18:38687146-38686787 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 57

Conread position: 5-383
Cow position: chr18:11685048-11684684 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 131

Conread position: 6-131
Cow position: chr18:23505396-23505271 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-342
Cow position: chr18:24855779-24856114 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 121, 29

Conread position: 6-349
Cow position: chr18:15613795-15614122 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 161, 126

Conread position: 6-377
Cow position: chr18:37023485-37023858 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 336

Conread position: 7-211
Cow position: chr18:42751539-42751752 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 30, 25

Conread position: 7-308
Cow position: chr18:33896354-33896656 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 205

Conread position: 7-338
Cow position: chr18:48713615-48713287 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 73

Conread position: 7-361
Cow position: chr18:20641432-20641771 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 122

Conread position: 7-368
Cow position: chr18:11779717-11779373 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 0

Conread position: 7-376
Cow position: chr18:55119939-55119573 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 192

Conread position: 7-378
Cow position: chr18:10576175-10575809 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 176

Conread position: 13-176
Cow position: chr18:53038888-53038722 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 13-261
Cow position: chr18:5766467-5766225 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 137, 51

Conread position: 17-226
Cow position: chr18:19688078-19687864 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 117

Conread position: 17-373
Cow position: chr18:52637475-52637827 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 111

Conread position: 17-374
Cow position: chr18:46108334-46108677 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 101

Conread position: 18-222
Cow position: chr18:46135794-46135591 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 151

Conread position: 18-361
Cow position: chr18:5578360-5578018 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 52

Conread position: 18-378
Cow position: chr18:20126358-20126000 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 39

Conread position: 18-378
Cow position: chr18:21681920-21682271 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 112, 27

Conread position: 18-381
Cow position: chr18:19193312-19193654 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 38

Conread position: 22-375
Cow position: chr18:25206139-25206492 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 81

Conread position: 22-378
Cow position: chr18:55692865-55692519 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 127, 143

Conread position: 23-216
Cow position: chr18:49038510-49038316 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 167

Conread position: 23-232
Cow position: chr18:4556121-4556330 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 156, 47

Conread position: 23-332
Cow position: chr18:22411563-22411874 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 245

Conread position: 23-345
Cow position: chr18:29796380-29796696 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 158, 108

Conread position: 23-346
Cow position: chr18:46048800-46048490 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 156, 92

Conread position: 23-365
Cow position: chr18:21102728-21103049 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 41

Conread position: 23-365
Cow position: chr18:23766361-23766706 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 23-365
Cow position: chr18:38985747-38985397 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 23-365
Cow position: chr18:42479538-42479870 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 289

Conread position: 23-367
Cow position: chr18:31586327-31586656 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 69

Conread position: 23-369
Cow position: chr18:20174081-20174424 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 106, 122

Conread position: 23-378
Cow position: chr18:15025720-15025374 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 168, 41

Conread position: 23-378
Cow position: chr18:19273048-19273402 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 110, 182

Conread position: 23-378
Cow position: chr18:50637425-50637766 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 23-381
Cow position: chr18:19849709-19850052 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 63

Conread position: 25-275
Cow position: chr18:39623847-39623594 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 108

Conread position: 25-375
Cow position: chr18:7965278-7964931 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 105

Conread position: 25-375
Cow position: chr18:39662826-39662485 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 5, 121

Conread position: 25-378
Cow position: chr18:19646222-19645872 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 115

Conread position: 25-378
Cow position: chr18:22120838-22121183 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 108

Conread position: 25-378
Cow position: chr18:40759253-40758913 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 123

Conread position: 25-379
Cow position: chr18:51757140-51756794 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 121

Conread position: 26-251
Cow position: chr18:21740770-21740990 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 156, 99

Conread position: 26-259
Cow position: chr18:16686290-16686525 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 122, 106

Conread position: 26-370
Cow position: chr18:23476642-23476965 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 34

Conread position: 26-378
Cow position: chr18:13507695-13508032 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 21

Conread position: 28-376
Cow position: chr18:5487285-5486952 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 36

Conread position: 29-243
Cow position: chr18:50974252-50974468 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 112, 101

Conread position: 29-378
Cow position: chr18:4182145-4182493 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 100

Conread position: 29-378
Cow position: chr18:7359787-7359431 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 146, 131

Conread position: 29-378
Cow position: chr18:14586428-14586779 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 100

Conread position: 29-378
Cow position: chr18:15880802-15881160 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 225

Conread position: 29-378
Cow position: chr18:17005302-17004947 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 145

Conread position: 29-378
Cow position: chr18:29958122-29958449 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 30-272
Cow position: chr18:55806592-55806833 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 147, 105

Conread position: 30-278
Cow position: chr18:3193746-3193496 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 114, 94

Conread position: 30-324
Cow position: chr18:25984530-25984823 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 147, 51

Conread position: 30-376
Cow position: chr18:7650026-7649693 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 73

Conread position: 31-332
Cow position: chr18:12023597-12023890 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 73

Conread position: 31-378
Cow position: chr18:11618508-11618179 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 34-238
Cow position: chr18:43950863-43950656 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 100

Conread position: 34-345
Cow position: chr18:4629079-4628764 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 111, 240

Conread position: 35-265
Cow position: chr18:52703810-52704047 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 0

Conread position: 35-378
Cow position: chr18:7951151-7950810 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 100, 128

Conread position: 35-378
Cow position: chr18:18339915-18340256 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 110

Conread position: 35-378
Cow position: chr18:55461670-55462012 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 257

Conread position: 35-378
Cow position: chr18:55553003-55552662 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 94

Conread position: 35-379
Cow position: chr18:4927105-4926770 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 95

Conread position: 36-323
Cow position: chr18:32883339-32883053 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 99, 28

Conread position: 36-326
Cow position: chr18:4495851-4496139 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 108

Conread position: 36-352
Cow position: chr18:32773914-32773602 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 79

Conread position: 37-304
Cow position: chr18:2863956-2864228 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 132

Conread position: 38-285
Cow position: chr18:3211911-3211658 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 233

Conread position: 38-359
Cow position: chr18:47525441-47525122 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 92, 221

Conread position: 38-364
Cow position: chr18:20270981-20271309 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 18

Conread position: 38-365
Cow position: chr18:51405873-51406193 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 91, 77

Conread position: 38-371
Cow position: chr18:9558011-9557685 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 36

Conread position: 38-376
Cow position: chr18:51827314-51826990 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 180, 92

Conread position: 38-377
Cow position: chr18:16044118-16044456 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 215
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 140, 104

Conread position: 38-378
Cow position: chr18:39001774-39002098 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 38-378
Cow position: chr18:48513308-48513639 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 92

Conread position: 40-224
Cow position: chr18:50095368-50095547 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 30

Conread position: 42-344
Cow position: chr18:9883702-9883401 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 121, 89

Conread position: 42-379
Cow position: chr18:23062171-23062507 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 214
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 111

Conread position: 46-376
Cow position: chr18:8104914-8105244 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 48-377
Cow position: chr18:11832143-11831836 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 51-378
Cow position: chr18:26355008-26355325 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 124, 86

Conread position: 52-378
Cow position: chr18:14048728-14048409 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 95

Conread position: 53-293
Cow position: chr18:6103079-6103317 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 116

Conread position: 72-234
Cow position: chr18:29991511-29991682 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 72-322
Cow position: chr18:20481883-20482121 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 75

Conread position: 72-377
Cow position: chr18:44548913-44549209 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 192

Conread position: 74-378
Cow position: chr18:7487247-7486949 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 72

Conread position: 87-382
Cow position: chr18:81731-81449 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 91-333
Cow position: chr18:35582117-35582360 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 42

Conread position: 105-374
Cow position: chr18:11680690-11680421 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 144-378
Cow position: chr18:13293439-13293207 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 151-379
Cow position: chr18:43564150-43563924 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 24

Conread position: 181-378
Cow position: chr18:48407683-48407486 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.