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Cow genome map

           
Conread name:
           
Liv1-LVRM10001H11
        

               
Conread position:
               
2-167
               

               
Cow position:
               
chr22:2109528-2109689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr22:40789664-40789424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr22:41898348-41898675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr22:3965285-3964933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
126, 146
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr22:12967970-12968324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
131, 146
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr22:37029509-37029866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr22:4060848-4061209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 115
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr22:2216908-2216551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr22:2623420-2623785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr22:17814331-17813954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr22:20626937-20626568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr22:26184062-26184434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 92
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr22:13957545-13957927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 214
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr22:34735962-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 122
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr22:10633012-10632692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr22:28357127-28356792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr22:4357189-4356832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr22:42635336-42635587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr22:16053402-16053118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr22:9171504-9171339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr22:42618096-42617927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr22:1659260-1659074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr22:1983944-1983753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
142, 122
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr22:34104576-34104774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr22:12341292-12341074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr22:12527027-12527247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr22:25387423-25387195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 201
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr22:19827767-19827997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
139, 157
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr22:45846238-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr22:30818308-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr22:19173798-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr22:14638381-14638652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
58, 231
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr22:9283502-9283781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
139, 128
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr22:1563157-1563437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr22:36432877-36433156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr22:12803289-12803578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
135, 214
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr22:2524059-2523768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr22:21530263-21530545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr22:12315906-12315614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
176, 40
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr22:30998982-30998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
138, 122
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr22:1289433-1289748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr22:7882648-7882303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr22:590435-590090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 166
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr22:6327672-6328018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr22:10295131-10294795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr22:17294840-17295184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
176, 140
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr22:44717817-44717455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 239
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr22:41982626-41982972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr22:1591120-1590760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 281
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr22:6720985-6721325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr22:8138169-8138518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
141, 127
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr22:29290048-29290396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr22:17852541-17852883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr22:28665379-28665006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 122
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr22:26786457-26786090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr22:9977905-9977556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr22:22613201-22612847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr22:15090838-15090474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 125
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr22:27171165-27171526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr22:28640055-28640419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 125
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr22:9127504-9127136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 145
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr22:15567920-15568289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 103
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr22:30049470-30049844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr22:23176345-23176722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
170, 127
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr22:40048650-40048292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr22:4119466-4119840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 271
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr22:21355045-21355413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 131
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr22:21502840-21502464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr22:25361580-25361218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:3250898-3251263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 124
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:4017569-4017201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:4645867-4645503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:8481740-8481374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 242
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:10567618-10567961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:10631484-10631101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 341
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:10936755-10937107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:11613520-11613154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 116
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:13300507-13300146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 134
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:14924636-14924999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
142, 128
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:15039086-15039460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:17152774-17152405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:21890264-21890633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:25742853-25743225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 165
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:31646588-31646220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 174
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr22:44741172-44740832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 115
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr22:1067818-1068190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 77
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr22:15950290-15950652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr22:18838352-18837982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 215
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr22:27047318-27047601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr22:14690876-14691214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 123
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr22:17764474-17764101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 58
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr22:4011278-4011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 130
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr22:41971060-41971410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 213
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr22:21295631-21295990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
7-372
               

               
Cow position:
               
chr22:6494255-6493906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 102
               

               
Conread position:
               
7-373
               

               
Cow position:
               
chr22:10339025-10339381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr22:864421-864788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr22:4563457-4563092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 167
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr22:22022994-22022620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr22:18020940-18021295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 19
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr22:21012478-21012115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
8-375
               

               
Cow position:
               
chr22:12573297-12572932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr22:46626286-46626644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chr22:16327588-16327268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
11-376
               

               
Cow position:
               
chr22:23980116-23980491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr22:30699271-30698907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 197
               

               
Conread position:
               
17-281
               

               
Cow position:
               
chr22:17132326-17132591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 183
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr22:23689120-23689410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
162, 116
               

               
Conread position:
               
17-331
               

               
Cow position:
               
chr22:27825924-27825609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 123
               

               
Conread position:
               
17-340
               

               
Cow position:
               
chr22:4108646-4108975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
102, 265
               

               
Conread position:
               
17-377
               

               
Cow position:
               
chr22:1484947-1484589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 185
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr22:26134140-26134509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr22:1871181-1870990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
130, 153
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr22:45132564-45132907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr22:845986-845633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 175
               

               
Conread position:
               
18-375
               

               
Cow position:
               
chr22:38977924-38977577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 130
               

               
Conread position:
               
18-376
               

               
Cow position:
               
chr22:3301256-3301594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
254, 115
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr22:28371024-28370672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
18-379
               

               
Cow position:
               
chr22:10532583-10532221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 111
               

               
Conread position:
               
18-379
               

               
Cow position:
               
chr22:23857129-23856773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
19-378
               

               
Cow position:
               
chr22:6600600-6600960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
145, 117
               

               
Conread position:
               
22-365
               

               
Cow position:
               
chr22:4583641-4583309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
22-376
               

               
Cow position:
               
chr22:8324318-8323976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
23-241
               

               
Cow position:
               
chr22:31154032-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 124
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr22:11458896-11458621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
23-328
               

               
Cow position:
               
chr22:5616380-5616075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
23-349
               

               
Cow position:
               
chr22:11130948-11130627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 154
               

               
Conread position:
               
23-349
               

               
Cow position:
               
chr22:42605715-42605387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr22:3325666-3325325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
23-368
               

               
Cow position:
               
chr22:28057972-28058305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 209
               

               
Conread position:
               
23-369
               

               
Cow position:
               
chr22:45513451-45513785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
23-375
               

               
Cow position:
               
chr22:26339832-26339488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
23-377
               

               
Cow position:
               
chr22:24734240-24734584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr22:18259297-18258954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr22:37201927-37201583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 114
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr22:43398080-43397745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 109
               

               
Conread position:
               
23-379
               

               
Cow position:
               
chr22:5337520-5337873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
23-381
               

               
Cow position:
               
chr22:21408303-21407930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
51, 120
               

               
Conread position:
               
24-298
               

               
Cow position:
               
chr22:1849151-1848870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 249
               

               
Conread position:
               
24-306
               

               
Cow position:
               
chr22:27274623-27274895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
24-345
               

               
Cow position:
               
chr22:5384729-5384414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
24-359
               

               
Cow position:
               
chr22:22997553-22997223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr22:37324619-37324290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
24-371
               

               
Cow position:
               
chr22:6215479-6215821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 196
               

               
Conread position:
               
24-374
               

               
Cow position:
               
chr22:32895294-32894933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
24-374
               

               
Cow position:
               
chr22:42612536-42612186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
24-375
               

               
Cow position:
               
chr22:534576-534220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
24-377
               

               
Cow position:
               
chr22:40720218-40720560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr22:15490731-15490387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
66, 123
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr22:22160803-22160447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 318
               

               
Conread position:
               
25-243
               

               
Cow position:
               
chr22:11766973-11767193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
25-343
               

               
Cow position:
               
chr22:16533151-16532841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
5, 119
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr22:19775357-19775695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 5
               

               
Conread position:
               
25-375
               

               
Cow position:
               
chr22:44180670-44180322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
5, 108
               

               
Conread position:
               
25-379
               

               
Cow position:
               
chr22:1279308-1279661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 247
               

               
Conread position:
               
25-379
               

               
Cow position:
               
chr22:16044339-16044704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 106
               

               
Conread position:
               
26-330
               

               
Cow position:
               
chr22:43119654-43119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 112
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr22:36633298-36632996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr22:10919776-10920138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
27-261
               

               
Cow position:
               
chr22:16094829-16095062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
119, 102
               

               
Conread position:
               
27-378
               

               
Cow position:
               
chr22:12681726-12682066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 110
               

               
Conread position:
               
29-262
               

               
Cow position:
               
chr22:43131486-43131713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 146
               

               
Conread position:
               
29-304
               

               
Cow position:
               
chr22:12800743-12800463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
61, 242
               

               
Conread position:
               
29-309
               

               
Cow position:
               
chr22:5675109-5675377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
29-342
               

               
Cow position:
               
chr22:22223259-22222954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
101, 117
               

               
Conread position:
               
29-373
               

               
Cow position:
               
chr22:18926428-18926082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 139
               

               
Conread position:
               
29-374
               

               
Cow position:
               
chr22:30964200-30963862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr22:4651248-4650910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr22:9372593-9372249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 147
               

               
Conread position:
               
29-377
               

               
Cow position:
               
chr22:11813651-11813988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
94, 123
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr22:644696-645034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
194, 65
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr22:10685019-10685356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr22:15760434-15760082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr22:16812092-16812437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
167, 101
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr22:30515329-30514981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 239
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr22:40374681-40374331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr22:15731265-15731072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
30-314
               

               
Cow position:
               
chr22:10598456-10598187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
151, 73
               

               
Conread position:
               
30-325
               

               
Cow position:
               
chr22:15068498-15068204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 134
               

               
Conread position:
               
30-354
               

               
Cow position:
               
chr22:17949901-17950207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
30-359
               

               
Cow position:
               
chr22:7967773-7967443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
31-282
               

               
Cow position:
               
chr22:12389169-12388909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr22:16273710-16273360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 308
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr22:36193903-36193587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
337, 61
               

               
Conread position:
               
31-382
               

               
Cow position:
               
chr22:11370521-11370868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
32-370
               

               
Cow position:
               
chr22:912167-911836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr22:2470174-2470502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr22:4988494-4988833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr22:31196434-31196770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 185
               

               
Conread position:
               
36-361
               

               
Cow position:
               
chr22:19652918-19653238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
79, 91
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr22:34616371-34616039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 173
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr22:8877320-8876997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 28
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr22:14882051-14882385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr22:30483980-30483638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr22:34726733-34726400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr22:43788064-43788404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 67
               

               
Conread position:
               
36-381
               

               
Cow position:
               
chr22:17992966-17993309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 125
               

               
Conread position:
               
37-357
               

               
Cow position:
               
chr22:16621240-16620920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 215
               

               
Conread position:
               
37-360
               

               
Cow position:
               
chr22:27581504-27581193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
37-376
               

               
Cow position:
               
chr22:34441569-34441907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr22:3993674-3993336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 89
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr22:38439093-38439432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
38-266
               

               
Cow position:
               
chr22:27835596-27835364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
38-275
               

               
Cow position:
               
chr22:6096954-6097198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 233
               

               
Conread position:
               
38-277
               

               
Cow position:
               
chr22:17126514-17126277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
38-312
               

               
Cow position:
               
chr22:3908993-3908710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
38-341
               

               
Cow position:
               
chr22:40387215-40386935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 102
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr22:10983413-10983099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
38-349
               

               
Cow position:
               
chr22:27550416-27550111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
38-352
               

               
Cow position:
               
chr22:7852027-7851711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
38-357
               

               
Cow position:
               
chr22:40120813-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 138
               

               
Conread position:
               
38-365
               

               
Cow position:
               
chr22:10421095-10420759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
112, 226
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr22:8418524-8418196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr22:25943538-25943209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 118
               

               
Conread position:
               
38-377
               

               
Cow position:
               
chr22:5290913-5290571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr22:1309671-1310001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr22:2095616-2095275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr22:32326862-32326527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 93
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr22:32892756-32892426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr22:34398393-34398729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 143
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr22:39472301-39472650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr22:22860849-22861186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr22:23830993-23830657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr22:4990104-4990448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 303
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr22:8733274-8733599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr22:23806478-23806824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
39-361
               

               
Cow position:
               
chr22:33448019-33448332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
39-377
               

               
Cow position:
               
chr22:6622185-6622518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 97
               

               
Conread position:
               
40-257
               

               
Cow position:
               
chr22:1874754-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
40-298
               

               
Cow position:
               
chr22:15025049-15025298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 107
               

               
Conread position:
               
40-374
               

               
Cow position:
               
chr22:26097559-26097883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
40-375
               

               
Cow position:
               
chr22:1265863-1266206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
40-378
               

               
Cow position:
               
chr22:21568058-21567729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 135
               

               
Conread position:
               
40-378
               

               
Cow position:
               
chr22:27322375-27322045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr22:7885050-7884724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr22:34712786-34712444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 255
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr22:4043989-4043659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
47-241
               

               
Cow position:
               
chr22:34632189-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 55
               

               
Conread position:
               
52-377
               

               
Cow position:
               
chr22:226405-226709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 125
               

               
Conread position:
               
55-378
               

               
Cow position:
               
chr22:32480434-32480739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
72-343
               

               
Cow position:
               
chr22:43812392-43812657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
72-354
               

               
Cow position:
               
chr22:39696317-39696046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
72-376
               

               
Cow position:
               
chr22:30955056-30954769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
72-378
               

               
Cow position:
               
chr22:891113-891413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
72-378
               

               
Cow position:
               
chr22:34597963-34597658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
72-379
               

               
Cow position:
               
chr22:41270972-41271265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
73-369
               

               
Cow position:
               
chr22:14186598-14186301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr22:10585676-10585929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
81-374
               

               
Cow position:
               
chr22:36569531-36569812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
88-365
               

               
Cow position:
               
chr22:59624-59345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
93-332
               

               
Cow position:
               
chr22:12974387-12974621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
103-377
               

               
Cow position:
               
chr22:1791981-1791716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
107-378
               

               
Cow position:
               
chr22:1342724-1342465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
108-378
               

               
Cow position:
               
chr22:9734846-9734582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
127-375
               

               
Cow position:
               
chr22:33949026-33949272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
132-305
               

               
Cow position:
               
chr22:7252675-7252849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
133-345
               

               
Cow position:
               
chr22:4026571-4026367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
140-376
               

               
Cow position:
               
chr22:13016833-13017053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr22:21905451-21905239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
149-375
               

               
Cow position:
               
chr22:19848443-19848666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
149-378
               

               
Cow position:
               
chr22:30689585-30689357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr22:44386456-44386659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
157-378
               

               
Cow position:
               
chr22:11200980-11200769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
179-323
               

               
Cow position:
               
chr22:17339843-17339982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr22:19714844-19714652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
180-380
               

               
Cow position:
               
chr22:11489453-11489268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 73
               

               
Conread position:
               
181-368
               

               
Cow position:
               
chr22:47410793-47410612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
182-376
               

               
Cow position:
               
chr22:34930826-34931020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-364
               

               
Cow position:
               
chr22:33985847-33986025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
154, 0
               
Show alignments to all cow chromosomes.