Cow genome map

Conread name: Liv1-LVRM10001H11

Conread position: 1-352
Cow position:
Alignm length: 357
Alignm identity: 233
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 98, 263

Conread position: 2-226
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 145, 134

Conread position: 3-337
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 145

Conread position: 3-365
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 128

Conread position: 3-378
Cow position:
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 198

Conread position: 3-381
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 125, 86

Conread position: 4-341
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 209, 125

Conread position: 4-368
Cow position:
Alignm length: 369
Alignm identity: 242
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 171, 13

Conread position: 5-167
Cow position:
Alignm length: 166
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 5-188
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 170, 40

Conread position: 5-195
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 141, 152

Conread position: 5-220
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 5-221
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 170, 124

Conread position: 5-232
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 113, 143

Conread position: 5-236
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 141

Conread position: 5-248
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 59

Conread position: 5-255
Cow position:
Alignm length: 252
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 176, 72

Conread position: 5-264
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 138

Conread position: 5-266
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 114, 145

Conread position: 5-274
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 174, 0

Conread position: 5-280
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 136, 13

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 142, 187

Conread position: 5-299
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 5-299
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 5-311
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 123, 195

Conread position: 5-314
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 98

Conread position: 5-328
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 124, 170

Conread position: 5-337
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 62

Conread position: 5-345
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 131, 188

Conread position: 5-356
Cow position:
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 27

Conread position: 5-357
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 146, 29

Conread position: 5-358
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 13

Conread position: 5-359
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 144

Conread position: 5-361
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 5-361
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 98

Conread position: 5-361
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 131

Conread position: 5-361
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 175

Conread position: 5-364
Cow position:
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 129

Conread position: 5-365
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 5-368
Cow position:
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 162

Conread position: 5-372
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 5-373
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 174, 59

Conread position: 5-374
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 153

Conread position: 5-374
Cow position:
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 29

Conread position: 5-376
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 96, 129

Conread position: 5-377
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 0

Conread position: 5-377
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 220

Conread position: 5-378
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 178

Conread position: 5-378
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 35

Conread position: 5-378
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 65

Conread position: 5-378
Cow position:
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 152

Conread position: 5-378
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 166

Conread position: 5-378
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 92

Conread position: 5-379
Cow position:
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 5-379
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 127

Conread position: 5-381
Cow position:
Alignm length: 378
Alignm identity: 257
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 174, 74

Conread position: 5-393
Cow position:
Alignm length: 414
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 137, 125

Conread position: 6-372
Cow position:
Alignm length: 376
Alignm identity: 260
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 78, 131

Conread position: 7-221
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 130, 159

Conread position: 7-240
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 15

Conread position: 7-290
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 17-295
Cow position:
Alignm length: 286
Alignm identity: 191
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 130, 0

Conread position: 17-297
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 0

Conread position: 17-326
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 88

Conread position: 17-378
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 158, 238

Conread position: 17-378
Cow position:
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 114

Conread position: 18-147
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 18-273
Cow position:
Alignm length: 260
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 8

Conread position: 18-358
Cow position:
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 147

Conread position: 18-370
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 115

Conread position: 18-374
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 250

Conread position: 18-378
Cow position:
Alignm length: 364
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 117, 32

Conread position: 23-249
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 58

Conread position: 23-290
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 23-311
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 44

Conread position: 23-313
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 32

Conread position: 23-318
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 126, 109

Conread position: 23-364
Cow position:
Alignm length: 346
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 171

Conread position: 23-372
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 127, 32

Conread position: 23-374
Cow position:
Alignm length: 357
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 244

Conread position: 23-375
Cow position:
Alignm length: 361
Alignm identity: 232
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 105

Conread position: 23-378
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 109, 22

Conread position: 23-378
Cow position:
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 161

Conread position: 23-378
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 125

Conread position: 24-310
Cow position:
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 25

Conread position: 24-311
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 10

Conread position: 24-372
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 88

Conread position: 24-373
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 126, 152

Conread position: 24-380
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 102

Conread position: 24-381
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 99, 36

Conread position: 25-354
Cow position:
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 108

Conread position: 25-360
Cow position:
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 103

Conread position: 26-241
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 121

Conread position: 26-378
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 89

Conread position: 26-378
Cow position:
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 224

Conread position: 26-381
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 118

Conread position: 27-375
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 108

Conread position: 29-192
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 19

Conread position: 29-365
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 35

Conread position: 29-373
Cow position:
Alignm length: 348
Alignm identity: 229
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 119, 169

Conread position: 29-378
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 40

Conread position: 29-378
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 224

Conread position: 29-378
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 238

Conread position: 30-273
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 117, 46

Conread position: 35-379
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 91

Conread position: 35-381
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 36-343
Cow position:
Alignm length: 310
Alignm identity: 197
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 101, 110

Conread position: 36-364
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 28

Conread position: 37-361
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 86

Conread position: 37-378
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 165

Conread position: 37-378
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 49

Conread position: 38-304
Cow position:
Alignm length: 273
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 7

Conread position: 38-312
Cow position:
Alignm length: 280
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 137, 98

Conread position: 38-333
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 137, 101

Conread position: 38-370
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 292, 77

Conread position: 38-372
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 38-378
Cow position:
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 67

Conread position: 38-378
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 118

Conread position: 38-378
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 108

Conread position: 38-378
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 100

Conread position: 38-378
Cow position:
Alignm length: 350
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 213

Conread position: 40-374
Cow position:
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 171

Conread position: 42-222
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 43-232
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 84

Conread position: 46-377
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 105

Conread position: 66-376
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 155

Conread position: 67-358
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 48

Conread position: 68-378
Cow position:
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 64

Conread position: 72-351
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 91

Conread position: 74-378
Cow position:
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 58

Conread position: 75-313
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 92

Conread position: 81-267
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 23

Conread position: 84-332
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 48

Conread position: 89-372
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 49

Conread position: 90-261
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 43

Conread position: 102-378
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 150

Conread position: 105-344
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 173-377
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 180-375
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 127, 84

Show alignments to all cow chromosomes.