Cow genome map

Conread name: Liv1-LVRM10001H11

Conread position: 2-248
Cow position: chr26:14905689-14905938 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 146, 247

Conread position: 2-260
Cow position: chr26:647607-647860 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 131, 85

Conread position: 3-278
Cow position: chr26:22152345-22152064 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 57

Conread position: 3-378
Cow position: chr26:33566926-33567295 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 130, 100

Conread position: 4-362
Cow position: chr26:33096442-33096804 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 126, 9

Conread position: 4-378
Cow position: chr26:31856825-31856455 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 9

Conread position: 5-126
Cow position: chr26:33242005-33241884 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr26:34611065-34611188 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-135
Cow position: chr26:7314738-7314608 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-167
Cow position: chr26:12940516-12940359 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 5-188
Cow position: chr26:14481438-14481621 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 164, 112

Conread position: 5-202
Cow position: chr26:23924966-23924766 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 132, 189

Conread position: 5-211
Cow position: chr26:677864-678070 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 130, 140

Conread position: 5-227
Cow position: chr26:24240795-24240569 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 59

Conread position: 5-227
Cow position: chr26:34724759-34724982 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 59

Conread position: 5-263
Cow position: chr26:12964581-12964839 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 56

Conread position: 5-263
Cow position: chr26:19446248-19445984 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 51

Conread position: 5-266
Cow position: chr26:20769967-20769709 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 136, 178

Conread position: 5-280
Cow position: chr26:16721980-16721707 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 127

Conread position: 5-280
Cow position: chr26:28251272-28250988 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 176

Conread position: 5-284
Cow position: chr26:22892329-22892609 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 139, 171

Conread position: 5-310
Cow position: chr26:14175398-14175095 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 127

Conread position: 5-314
Cow position: chr26:17148820-17148510 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 33

Conread position: 5-345
Cow position: chr26:21636921-21637258 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 166

Conread position: 5-348
Cow position: chr26:31605522-31605184 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 97

Conread position: 5-356
Cow position: chr26:21243211-21242872 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 116, 57

Conread position: 5-375
Cow position: chr26:18825167-18825524 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 118

Conread position: 5-378
Cow position: chr26:8307412-8307761 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 128

Conread position: 5-378
Cow position: chr26:8353085-8352705 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 167

Conread position: 5-378
Cow position: chr26:12145002-12145357 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 110, 119

Conread position: 5-378
Cow position: chr26:13021029-13021403 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 134

Conread position: 5-378
Cow position: chr26:20291576-20291936 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 122

Conread position: 5-378
Cow position: chr26:26888019-26888388 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 5-378
Cow position: chr26:27491385-27491756 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 59

Conread position: 5-381
Cow position: chr26:9492038-9491669 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 59

Conread position: 6-262
Cow position: chr26:9535631-9535376 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 142, 28

Conread position: 6-294
Cow position: chr26:23315889-23315596 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 7-217
Cow position: chr26:7687131-7687337 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 125

Conread position: 7-263
Cow position: chr26:8643055-8642797 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 140, 57

Conread position: 7-360
Cow position: chr26:33112271-33112620 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 12-360
Cow position: chr26:35704496-35704149 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 14

Conread position: 15-278
Cow position: chr26:23582839-23583104 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 132, 117

Conread position: 17-280
Cow position: chr26:22131908-22131638 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 158

Conread position: 17-347
Cow position: chr26:24629836-24629524 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 158, 77

Conread position: 17-377
Cow position: chr26:14174404-14174043 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 117

Conread position: 18-361
Cow position: chr26:34108861-34108534 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 63

Conread position: 20-377
Cow position: chr26:7642472-7642830 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 110

Conread position: 23-355
Cow position: chr26:19774201-19774534 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 124, 107

Conread position: 23-359
Cow position: chr26:32670398-32670725 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 23-364
Cow position: chr26:32652636-32652963 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 97

Conread position: 23-378
Cow position: chr26:6475331-6475681 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 26

Conread position: 23-378
Cow position: chr26:8699949-8700304 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 106

Conread position: 23-378
Cow position: chr26:26466634-26466972 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 24-298
Cow position: chr26:22354510-22354239 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 83, 77

Conread position: 24-299
Cow position: chr26:22249380-22249657 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 0

Conread position: 24-363
Cow position: chr26:17204048-17204377 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 215
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 138, 16

Conread position: 24-374
Cow position: chr26:613576-613923 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 26

Conread position: 24-381
Cow position: chr26:25394136-25393773 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 262

Conread position: 25-334
Cow position: chr26:25526346-25526036 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 153

Conread position: 25-374
Cow position: chr26:3071880-3072213 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 150, 11

Conread position: 25-379
Cow position: chr26:34314788-34314423 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 5, 113

Conread position: 26-236
Cow position: chr26:18651541-18651750 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 62, 38

Conread position: 27-323
Cow position: chr26:20013570-20013280 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 188
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 152, 21

Conread position: 29-241
Cow position: chr26:12893335-12893542 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 117

Conread position: 29-263
Cow position: chr26:33736462-33736693 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 96

Conread position: 29-372
Cow position: chr26:8811219-8810884 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 113

Conread position: 29-378
Cow position: chr26:4363392-4363051 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 187, 135

Conread position: 29-378
Cow position: chr26:32683208-32682860 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 45, 35

Conread position: 31-376
Cow position: chr26:32897779-32898123 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 99

Conread position: 33-278
Cow position: chr26:14578415-14578168 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 120, 96

Conread position: 35-333
Cow position: chr26:33857107-33857406 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 7, 140

Conread position: 35-349
Cow position: chr26:23142018-23142323 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 95, 148

Conread position: 35-376
Cow position: chr26:29333179-29332848 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 114

Conread position: 36-375
Cow position: chr26:22116806-22116472 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 186, 113

Conread position: 37-378
Cow position: chr26:32601434-32601097 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 183, 80

Conread position: 38-298
Cow position: chr26:16179645-16179385 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 137, 94

Conread position: 38-299
Cow position: chr26:25299682-25299421 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 91

Conread position: 38-329
Cow position: chr26:10764295-10764014 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 38-330
Cow position: chr26:9604645-9604355 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 118

Conread position: 38-351
Cow position: chr26:21992185-21991885 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 106

Conread position: 38-379
Cow position: chr26:3706875-3706545 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 131, 104

Conread position: 40-365
Cow position: chr26:23599715-23600033 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 64, 132

Conread position: 40-379
Cow position: chr26:3757870-3757535 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 182, 92

Conread position: 42-364
Cow position: chr26:7148226-7148538 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 95

Conread position: 52-270
Cow position: chr26:10747565-10747775 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 10

Conread position: 72-354
Cow position: chr26:5307192-5306902 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 72-371
Cow position: chr26:2345598-2345887 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 72, 56

Conread position: 78-375
Cow position: chr26:20846667-20846372 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 73

Conread position: 84-265
Cow position: chr26:7156008-7155831 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 48

Conread position: 84-378
Cow position: chr26:32013670-32013376 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 45, 183

Conread position: 85-262
Cow position: chr26:31572282-31572110 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 90-369
Cow position: chr26:3181908-3182194 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 95-365
Cow position: chr26:24280850-24280588 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 84

Conread position: 105-379
Cow position: chr26:7525457-7525723 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 151-375
Cow position: chr26:7961602-7961388 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 112

Conread position: 180-361
Cow position: chr26:14293103-14292930 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.