Cow genome map


           Conread name:
           Liv1-LVRM10001H11
        

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               146, 247
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               131, 85
               

               Conread position:
               3-278
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               130, 100
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               126, 9
               

               Conread position:
               4-378
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               5-126
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-128
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-135
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-167
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               5-188
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               164, 112
               

               Conread position:
               5-202
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               132, 189
               

               Conread position:
               5-211
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               130, 140
               

               Conread position:
               5-227
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               5-227
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               130, 59
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               126, 56
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               128, 51
               

               Conread position:
               5-266
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               136, 178
               

               Conread position:
               5-280
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 127
               

               Conread position:
               5-280
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               82, 176
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               139, 171
               

               Conread position:
               5-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 127
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 33
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 166
               

               Conread position:
               5-348
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 97
               

               Conread position:
               5-356
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               116, 57
               

               Conread position:
               5-375
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 118
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 128
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 167
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               110, 119
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 134
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 122
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 59
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 59
               

               Conread position:
               6-262
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               142, 28
               

               Conread position:
               6-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               168, 125
               

               Conread position:
               7-263
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               7-360
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               12-360
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               15-278
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               17-280
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 158
               

               Conread position:
               17-347
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               158, 77
               

               Conread position:
               17-377
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 117
               

               Conread position:
               18-361
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               20-377
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 110
               

               Conread position:
               23-355
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               124, 107
               

               Conread position:
               23-359
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               23-364
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 97
               

               Conread position:
               23-378
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               23-378
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 106
               

               Conread position:
               23-378
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               24-298
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               83, 77
               

               Conread position:
               24-299
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               24-363
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               138, 16
               

               Conread position:
               24-374
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               24-381
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 262
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 153
               

               Conread position:
               25-374
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               25-379
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               26-236
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               27-323
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               152, 21
               

               Conread position:
               29-241
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               103, 117
               

               Conread position:
               29-263
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               120, 96
               

               Conread position:
               29-372
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 113
               

               Conread position:
               29-378
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               187, 135
               

               Conread position:
               29-378
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               31-376
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 99
               

               Conread position:
               33-278
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 96
               

               Conread position:
               35-333
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 140
               

               Conread position:
               35-349
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               95, 148
               

               Conread position:
               35-376
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 114
               

               Conread position:
               36-375
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               186, 113
               

               Conread position:
               37-378
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               183, 80
               

               Conread position:
               38-298
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               137, 94
               

               Conread position:
               38-299
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               129, 91
               

               Conread position:
               38-329
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               38-330
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 118
               

               Conread position:
               38-351
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 106
               

               Conread position:
               38-379
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               131, 104
               

               Conread position:
               40-365
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               64, 132
               

               Conread position:
               40-379
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               182, 92
               

               Conread position:
               42-364
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               86, 95
               

               Conread position:
               52-270
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               72-354
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               72-371
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               78-375
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               84-265
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               84-378
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               45, 183
               

               Conread position:
               85-262
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               90-369
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               95-365
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               105-379
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               151-375
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               180-361
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 0
               
Show alignments to all cow chromosomes.