Cow genome map
| Conread name: | Liv1-LVRM10001H11 |
| Conread position: | 1-310 |
| Cow position: | chr28:4809887-4809596 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 164, 129 |
| Conread position: | 2-186 |
| Cow position: | chr28:7619043-7619229 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 2-314 |
| Cow position: | chr28:4089951-4090246 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 2-374 |
| Cow position: | chr28:26719450-26719099 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 179, 127 |
| Conread position: | 2-377 |
| Cow position: | chr28:23007623-23007992 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 148, 264 |
| Conread position: | 2-377 |
| Cow position: | chr28:24966494-24966124 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 2-378 |
| Cow position: | chr28:7865436-7865063 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 280 |
| Conread position: | 3-357 |
| Cow position: | chr28:16110045-16109700 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 3-365 |
| Cow position: | chr28:30326985-30327333 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 3-368 |
| Cow position: | chr28:2862974-2862606 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 155 |
| Conread position: | 3-368 |
| Cow position: | chr28:33052144-33051765 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 173 |
| Conread position: | 3-378 |
| Cow position: | chr28:25057068-25056706 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 19 |
| Conread position: | 4-377 |
| Cow position: | chr28:2960725-2961086 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 86, 135 |
| Conread position: | 5-167 |
| Cow position: | chr28:4013188-4013029 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 5-188 |
| Cow position: | chr28:12070335-12070156 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 83 |
| Conread position: | 5-192 |
| Cow position: | chr28:7350758-7350574 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 174, 139 |
| Conread position: | 5-200 |
| Cow position: | chr28:4182105-4181912 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 140 |
| Conread position: | 5-215 |
| Cow position: | chr28:16245961-16246169 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 137, 59 |
| Conread position: | 5-222 |
| Cow position: | chr28:5577633-5577412 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 102 |
| Conread position: | 5-222 |
| Cow position: | chr28:22813362-22813152 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 5-224 |
| Cow position: | chr28:25128990-25128768 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 132, 62 |
| Conread position: | 5-230 |
| Cow position: | chr28:11079406-11079185 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 5-241 |
| Cow position: | chr28:8140586-8140350 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 143, 127 |
| Conread position: | 5-249 |
| Cow position: | chr28:27161223-27161470 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 5-254 |
| Cow position: | chr28:10863688-10863927 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 79 |
| Conread position: | 5-263 |
| Cow position: | chr28:24082374-24082116 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 139, 183 |
| Conread position: | 5-273 |
| Cow position: | chr28:32365948-32365681 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 121, 129 |
| Conread position: | 5-298 |
| Cow position: | chr28:11828858-11829128 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 271, 59 |
| Conread position: | 5-310 |
| Cow position: | chr28:3169085-3169389 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 123, 98 |
| Conread position: | 5-311 |
| Cow position: | chr28:4159059-4158753 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 163 |
| Conread position: | 5-322 |
| Cow position: | chr28:4884149-4884476 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 5-323 |
| Cow position: | chr28:29416613-29416927 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 5-345 |
| Cow position: | chr28:2131820-2132155 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 5-350 |
| Cow position: | chr28:9285273-9285615 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 5-352 |
| Cow position: | chr28:9636353-9636696 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 5-352 |
| Cow position: | chr28:31841244-31841579 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 13 |
| Conread position: | 5-358 |
| Cow position: | chr28:4071070-4070724 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 5-358 |
| Cow position: | chr28:14649446-14649102 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 42 |
| Conread position: | 5-358 |
| Cow position: | chr28:16346428-16346771 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 5-360 |
| Cow position: | chr28:3746306-3745954 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 133 |
| Conread position: | 5-364 |
| Cow position: | chr28:16369979-16370325 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 5-364 |
| Cow position: | chr28:26922264-26922615 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 142 |
| Conread position: | 5-367 |
| Cow position: | chr28:22346125-22345765 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 269 |
| Conread position: | 5-370 |
| Cow position: | chr28:6059366-6059730 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 125 |
| Conread position: | 5-372 |
| Cow position: | chr28:19025901-19026262 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 125, 248 |
| Conread position: | 5-372 |
| Cow position: | chr28:29434324-29434684 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 5-373 |
| Cow position: | chr28:10172313-10172674 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 5-373 |
| Cow position: | chr28:21868561-21868192 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 336 |
| Conread position: | 5-373 |
| Cow position: | chr28:34133965-34133604 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 130, 82 |
| Conread position: | 5-374 |
| Cow position: | chr28:8021999-8022372 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 50 |
| Conread position: | 5-377 |
| Cow position: | chr28:11752035-11752409 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 121 |
| Conread position: | 5-378 |
| Cow position: | chr28:662212-661856 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 5-378 |
| Cow position: | chr28:5204299-5203937 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 230 |
| Conread position: | 5-378 |
| Cow position: | chr28:5684806-5684439 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 7 |
| Conread position: | 5-378 |
| Cow position: | chr28:6971244-6971604 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 170 |
| Conread position: | 5-378 |
| Cow position: | chr28:8787643-8787285 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 42 |
| Conread position: | 5-378 |
| Cow position: | chr28:10588918-10589294 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 19 |
| Conread position: | 5-378 |
| Cow position: | chr28:11426437-11426810 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 112 |
| Conread position: | 5-378 |
| Cow position: | chr28:11585098-11585473 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 133 |
| Conread position: | 5-378 |
| Cow position: | chr28:12430708-12430344 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 5-378 |
| Cow position: | chr28:12964671-12964312 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 5-378 |
| Cow position: | chr28:13474404-13474043 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 118 |
| Conread position: | 5-378 |
| Cow position: | chr28:14998171-14997799 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 125 |
| Conread position: | 5-378 |
| Cow position: | chr28:16919065-16919429 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 53 |
| Conread position: | 5-378 |
| Cow position: | chr28:22332632-22332285 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 109 |
| Conread position: | 5-378 |
| Cow position: | chr28:28164189-28163831 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 5-379 |
| Cow position: | chr28:12619678-12619296 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 5-379 |
| Cow position: | chr28:18591374-18591004 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 59 |
| Conread position: | 5-381 |
| Cow position: | chr28:11527155-11527524 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 6-361 |
| Cow position: | chr28:23676241-23675896 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 136, 123 |
| Conread position: | 6-373 |
| Cow position: | chr28:3492681-3493044 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 81 |
| Conread position: | 7-267 |
| Cow position: | chr28:2873020-2872760 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 140, 5 |
| Conread position: | 7-332 |
| Cow position: | chr28:4016633-4016310 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 120 |
| Conread position: | 7-378 |
| Cow position: | chr28:3914819-3914445 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 263 |
| Conread position: | 13-359 |
| Cow position: | chr28:8408830-8408490 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 120, 134 |
| Conread position: | 13-362 |
| Cow position: | chr28:10529394-10529732 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 15-171 |
| Cow position: | chr28:26531183-26531343 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 104, 122 |
| Conread position: | 15-379 |
| Cow position: | chr28:33884495-33884143 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 17-269 |
| Cow position: | chr28:4440388-4440143 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 110 |
| Conread position: | 17-291 |
| Cow position: | chr28:14720692-14720956 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 158, 103 |
| Conread position: | 17-312 |
| Cow position: | chr28:27313640-27313948 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 101, 154 |
| Conread position: | 17-378 |
| Cow position: | chr28:7512492-7512857 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 17-381 |
| Cow position: | chr28:34442666-34443032 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 158, 92 |
| Conread position: | 18-347 |
| Cow position: | chr28:11884430-11884757 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 97 |
| Conread position: | 18-376 |
| Cow position: | chr28:20124876-20124523 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 248 |
| Conread position: | 23-259 |
| Cow position: | chr28:18186642-18186403 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 125, 93 |
| Conread position: | 23-282 |
| Cow position: | chr28:2752408-2752670 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 152, 182 |
| Conread position: | 23-328 |
| Cow position: | chr28:24018070-24017788 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 177, 76 |
| Conread position: | 23-349 |
| Cow position: | chr28:16204248-16204570 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 107 |
| Conread position: | 23-378 |
| Cow position: | chr28:7267860-7268201 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 23-378 |
| Cow position: | chr28:26743712-26743357 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 23-379 |
| Cow position: | chr28:20313363-20313009 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 126 |
| Conread position: | 23-381 |
| Cow position: | chr28:3023827-3024180 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 147 |
| Conread position: | 23-381 |
| Cow position: | chr28:15043776-15044124 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 44 |
| Conread position: | 24-278 |
| Cow position: | chr28:20409472-20409222 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 24-361 |
| Cow position: | chr28:26103787-26103467 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 24-378 |
| Cow position: | chr28:11786632-11786971 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 116 |
| Conread position: | 24-378 |
| Cow position: | chr28:21598167-21598518 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 113 |
| Conread position: | 25-339 |
| Cow position: | chr28:8347816-8347508 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 5, 120 |
| Conread position: | 25-361 |
| Cow position: | chr28:5236519-5236848 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 25-365 |
| Cow position: | chr28:3078597-3078930 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 24 |
| Conread position: | 25-407 |
| Cow position: | chr28:34230313-34229935 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 118 |
| Conread position: | 26-188 |
| Cow position: | chr28:5138908-5139076 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 26-341 |
| Cow position: | chr28:33163381-33163696 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 26-374 |
| Cow position: | chr28:9740549-9740210 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 112, 142 |
| Conread position: | 26-376 |
| Cow position: | chr28:4536542-4536207 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 26-378 |
| Cow position: | chr28:19222068-19222410 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 28-359 |
| Cow position: | chr28:11686947-11687279 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 29-287 |
| Cow position: | chr28:4643690-4643939 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 115 |
| Conread position: | 29-297 |
| Cow position: | chr28:26982658-26982931 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 93, 117 |
| Conread position: | 29-298 |
| Cow position: | chr28:10999589-10999854 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 101, 206 |
| Conread position: | 29-298 |
| Cow position: | chr28:11866585-11866855 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 29-332 |
| Cow position: | chr28:18625314-18625003 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 119, 98 |
| Conread position: | 29-361 |
| Cow position: | chr28:21672873-21672551 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 29-371 |
| Cow position: | chr28:25806653-25806331 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 235 |
| Conread position: | 29-375 |
| Cow position: | chr28:10681745-10682080 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 29-375 |
| Cow position: | chr28:10745294-10744947 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 100 |
| Conread position: | 29-377 |
| Cow position: | chr28:31109924-31110269 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 110 |
| Conread position: | 29-378 |
| Cow position: | chr28:4282411-4282757 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 52 |
| Conread position: | 29-378 |
| Cow position: | chr28:4307817-4308163 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 92, 142 |
| Conread position: | 29-378 |
| Cow position: | chr28:5792788-5792437 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 86, 119 |
| Conread position: | 29-378 |
| Cow position: | chr28:21380961-21380616 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 29-379 |
| Cow position: | chr28:14934038-14933696 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 100 |
| Conread position: | 33-305 |
| Cow position: | chr28:4834768-4835038 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 144 |
| Conread position: | 35-365 |
| Cow position: | chr28:17637791-17638119 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 36-303 |
| Cow position: | chr28:30937596-30937857 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 36-364 |
| Cow position: | chr28:21502465-21502144 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 107 |
| Conread position: | 36-381 |
| Cow position: | chr28:5827023-5826678 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 110 |
| Conread position: | 37-369 |
| Cow position: | chr28:29199802-29199471 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 144 |
| Conread position: | 38-311 |
| Cow position: | chr28:4138600-4138868 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 148, 99 |
| Conread position: | 38-322 |
| Cow position: | chr28:5437015-5437301 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 7 |
| Conread position: | 38-349 |
| Cow position: | chr28:34430352-34430663 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 127, 105 |
| Conread position: | 38-379 |
| Cow position: | chr28:24672336-24672007 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 39-378 |
| Cow position: | chr28:23530944-23530599 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 40-370 |
| Cow position: | chr28:18934523-18934195 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 40-378 |
| Cow position: | chr28:5771435-5771101 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 40-379 |
| Cow position: | chr28:7548989-7549328 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 187 |
| Conread position: | 43-381 |
| Cow position: | chr28:4588163-4587828 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 47-378 |
| Cow position: | chr28:7751239-7751566 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 47-378 |
| Cow position: | chr28:22371619-22371941 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 121 |
| Conread position: | 48-331 |
| Cow position: | chr28:2737745-2738030 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 49-378 |
| Cow position: | chr28:3256858-3256536 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 73-375 |
| Cow position: | chr28:5904768-5904474 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 74-371 |
| Cow position: | chr28:6861989-6861695 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 80-262 |
| Cow position: | chr28:7607947-7608133 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 81-378 |
| Cow position: | chr28:30293561-30293855 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 84-360 |
| Cow position: | chr28:8681814-8682098 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 44, 209 |
| Conread position: | 87-361 |
| Cow position: | chr28:24646561-24646292 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 91-345 |
| Cow position: | chr28:10212699-10212930 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 94-278 |
| Cow position: | chr28:657436-657618 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 104-297 |
| Cow position: | chr28:13290124-13290319 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 173 |
| Conread position: | 104-378 |
| Cow position: | chr28:5805515-5805260 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 105-375 |
| Cow position: | chr28:17029713-17029979 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 105-378 |
| Cow position: | chr28:4880260-4880529 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 121-375 |
| Cow position: | chr28:16243773-16244021 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 124-349 |
| Cow position: | chr28:6051721-6051496 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 126-372 |
| Cow position: | chr28:31971769-31972006 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 135-374 |
| Cow position: | chr28:11451486-11451728 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 138-333 |
| Cow position: | chr28:9108418-9108221 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 156-303 |
| Cow position: | chr28:23724501-23724647 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 180-379 |
| Cow position: | chr28:20759991-20760190 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.