Cow genome map

Conread name: Liv1-LVRM10001H11

Conread position: 1-274
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 128, 61

Conread position: 1-286
Cow position:
Alignm length: 297
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 186

Conread position: 2-352
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 146, 62

Conread position: 2-361
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 146, 110

Conread position: 2-378
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 17

Conread position: 2-378
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 2-378
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 60

Conread position: 3-282
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 133, 100

Conread position: 3-343
Cow position:
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 61

Conread position: 3-378
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 4-246
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 13

Conread position: 4-332
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 126, 9

Conread position: 4-355
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 5-127
Cow position:
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-187
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 65

Conread position: 5-193
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 174, 133

Conread position: 5-231
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 121

Conread position: 5-239
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 128

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 145, 13

Conread position: 5-266
Cow position:
Alignm length: 274
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 66

Conread position: 5-297
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 59

Conread position: 5-299
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 124

Conread position: 5-300
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 143, 111

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 131, 37

Conread position: 5-342
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 105, 59

Conread position: 5-342
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 5-355
Cow position:
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 96

Conread position: 5-358
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 98

Conread position: 5-361
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 172

Conread position: 5-361
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 257

Conread position: 5-364
Cow position:
Alignm length: 371
Alignm identity: 255
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 122, 43

Conread position: 5-364
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 5-370
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 5-370
Cow position:
Alignm length: 371
Alignm identity: 249
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 170, 67

Conread position: 5-372
Cow position:
Alignm length: 369
Alignm identity: 245
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 169, 112

Conread position: 5-372
Cow position:
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 86

Conread position: 5-373
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 5-374
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 5-374
Cow position:
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 124

Conread position: 5-376
Cow position:
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 65

Conread position: 5-377
Cow position:
Alignm length: 377
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 128, 15

Conread position: 5-378
Cow position:
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 29

Conread position: 5-378
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 112

Conread position: 5-378
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 143

Conread position: 5-378
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 178, 45

Conread position: 5-378
Cow position:
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 127

Conread position: 5-378
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 59

Conread position: 5-379
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 175

Conread position: 7-167
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 134, 29

Conread position: 7-173
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 27

Conread position: 8-356
Cow position:
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 254

Conread position: 10-342
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 196

Conread position: 10-357
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 130

Conread position: 11-378
Cow position:
Alignm length: 372
Alignm identity: 249
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 122

Conread position: 17-274
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 17-374
Cow position:
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 114

Conread position: 18-379
Cow position:
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 72

Conread position: 18-379
Cow position:
Alignm length: 363
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 156

Conread position: 20-378
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 157

Conread position: 22-378
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 5

Conread position: 23-274
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 243, 41

Conread position: 23-278
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 156, 104

Conread position: 23-323
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 115

Conread position: 23-323
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 187, 106

Conread position: 23-332
Cow position:
Alignm length: 314
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 123

Conread position: 23-361
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 239

Conread position: 23-368
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 23-376
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 23-378
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 23-379
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 115, 258

Conread position: 23-379
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 169

Conread position: 24-306
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 114

Conread position: 24-358
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 123, 21

Conread position: 24-378
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 151, 102

Conread position: 24-378
Cow position:
Alignm length: 360
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 198

Conread position: 25-276
Cow position:
Alignm length: 261
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 112

Conread position: 25-349
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 5, 108

Conread position: 25-361
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 108

Conread position: 25-378
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 258

Conread position: 29-263
Cow position:
Alignm length: 239
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 218

Conread position: 29-265
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 101

Conread position: 29-267
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 116, 144

Conread position: 29-349
Cow position:
Alignm length: 324
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 189, 100

Conread position: 29-365
Cow position:
Alignm length: 337
Alignm identity: 225
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 29-372
Cow position:
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 35

Conread position: 29-374
Cow position:
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 116

Conread position: 29-374
Cow position:
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 148

Conread position: 29-376
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 108

Conread position: 29-378
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 117, 190

Conread position: 29-378
Cow position:
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 96

Conread position: 30-257
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 118, 0

Conread position: 30-343
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 116

Conread position: 31-354
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 101

Conread position: 31-378
Cow position:
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 143

Conread position: 33-378
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 115, 31

Conread position: 33-380
Cow position:
Alignm length: 354
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 96

Conread position: 35-274
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 158

Conread position: 35-342
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 185, 85

Conread position: 35-376
Cow position:
Alignm length: 354
Alignm identity: 246
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 65

Conread position: 36-221
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 79

Conread position: 36-308
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 113, 85

Conread position: 36-326
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 134

Conread position: 36-350
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 229

Conread position: 37-305
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 111, 33

Conread position: 38-296
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 91, 78

Conread position: 38-316
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 120

Conread position: 38-326
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 141, 208

Conread position: 38-370
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 112

Conread position: 38-373
Cow position:
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 142

Conread position: 38-378
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 226

Conread position: 38-379
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 93, 108

Conread position: 39-258
Cow position:
Alignm length: 227
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 124

Conread position: 40-249
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 98

Conread position: 40-318
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 110, 93

Conread position: 40-379
Cow position:
Alignm length: 348
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 72

Conread position: 41-288
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 176, 106

Conread position: 42-322
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 93, 102

Conread position: 42-335
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 113

Conread position: 45-381
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 19

Conread position: 52-379
Cow position:
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 35

Conread position: 63-293
Cow position:
Alignm length: 234
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 86

Conread position: 72-265
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 73

Conread position: 72-317
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 200

Conread position: 72-349
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 96

Conread position: 72-360
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 52, 174

Conread position: 72-378
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 75, 95

Conread position: 73-374
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 60

Conread position: 73-378
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 59

Conread position: 73-378
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 59

Conread position: 87-352
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 63

Conread position: 134-375
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 37

Conread position: 140-378
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 10

Conread position: 143-364
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 156

Conread position: 178-377
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 20

Conread position: 180-309
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 26

Conread position: 180-339
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 74

Conread position: 180-354
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 37

Conread position: 181-377
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 38

Show alignments to all cow chromosomes.