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Cow genome map

           
Conread name:
           
Liv1-LVRM10001H11
        

               
Conread position:
               
2-135
               

               
Cow position:
               
chr4:38209880-38210013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr4:25537642-25537409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr4:19500997-19501249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr4:16594177-16593885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr4:13344633-13344338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
136, 169
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr4:51769198-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
173, 62
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr4:13693577-13693912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 101
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr4:29291609-29291275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr4:54191184-54190829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr4:36841360-36840999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 10
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr4:60897188-60897551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr4:65815613-65815970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:44449415-44449659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr4:12127545-12127886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
171, 124
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr4:42921766-42922102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr4:63459129-63459491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 109
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr4:3850645-3850275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 141
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr4:46383276-46383649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr4:4843152-4843433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr4:43515809-43515522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
167, 66
               

               
Conread position:
               
5-144
               

               
Cow position:
               
chr4:18952065-18951926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-146
               

               
Cow position:
               
chr4:44903383-44903243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr4:17851161-17851318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 124
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr4:54541546-54541707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr4:19324066-19323902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr4:61478697-61478526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr4:60719193-60719023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr4:10851359-10851543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr4:38156996-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 127
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:48396704-48396924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr4:52831925-52832149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 78
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr4:21874267-21874038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 173
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr4:54927348-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr4:20027012-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr4:48409177-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr4:68889469-68889707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
143, 128
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr4:19119109-19118854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr4:59378001-59377761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
123, 143
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr4:54478830-54479078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
164, 59
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr4:3421714-3421448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
137, 162
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr4:34022493-34022766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
139, 120
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr4:17186259-17186535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
5-279
               

               
Cow position:
               
chr4:66547676-66547950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
143, 132
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr4:38944166-38944461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr4:17774258-17774547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
139, 258
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr4:28839709-28839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 59
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr4:38935450-38935145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 19
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr4:59277388-59277699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr4:24810359-24810672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr4:36290716-36290379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
170, 121
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr4:4319059-4319382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr4:26659392-26659060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr4:61897443-61897784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 133
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr4:21531552-21531887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr4:58880869-58881215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 337
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr4:7808663-7808327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 81
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr4:54455251-54455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr4:45583031-45583385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 55
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr4:49158703-49159037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
230, 52
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr4:65919700-65919359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr4:3283355-3283709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 142
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr4:62983470-62983813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr4:34630990-34630641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 135
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr4:63095982-63096337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 153
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr4:19700187-19699834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr4:35982090-35981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr4:34641635-34641996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr4:27530210-27529839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 126
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr4:31136847-31136481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr4:19744967-19744612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr4:56239768-56240120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 121
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr4:40414536-40414908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 185
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:7430412-7430041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:7964555-7964929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 184
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:10732315-10731941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 129
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:11194277-11193904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:12903913-12903538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 242
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:19582526-19582894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:20327617-20327993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:21391720-21392082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 92
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:23600259-23599892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 115
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:36731282-36730912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 113
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:38952645-38952281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 122
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:42423713-42424079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 122
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:44782466-44782096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 76
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:48152283-48152647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:48486086-48485715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 157
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:51728171-51727805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 290
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:51899098-51898724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:53100893-53100528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 172
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:62472171-62471790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 131
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr4:68387884-68387514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:11871830-11872191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 115
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:14153199-14152795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:22009966-22010337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:24001875-24002248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:33970804-33971176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 180
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:37915244-37915608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr4:37935193-37935560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 142
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr4:58248493-58248129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr4:4085019-4085418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 149
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr4:3341044-3340665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 98
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr4:4186211-4185877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr4:25972988-25972622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr4:9815256-9815630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 97
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr4:19097378-19097014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
7-372
               

               
Cow position:
               
chr4:33433166-33433530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 280
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr4:4084361-4084722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 121
               

               
Conread position:
               
9-345
               

               
Cow position:
               
chr4:41602937-41602604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
138, 167
               

               
Conread position:
               
9-374
               

               
Cow position:
               
chr4:20139429-20139793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
13-330
               

               
Cow position:
               
chr4:25356236-25356536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
16-347
               

               
Cow position:
               
chr4:21232793-21233118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr4:29106987-29106695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr4:31859344-31859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
130, 161
               

               
Conread position:
               
17-311
               

               
Cow position:
               
chr4:2885460-2885750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 223
               

               
Conread position:
               
17-358
               

               
Cow position:
               
chr4:27665093-27664747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
129, 95
               

               
Conread position:
               
17-376
               

               
Cow position:
               
chr4:51903685-51903326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr4:9137359-9136999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
17-379
               

               
Cow position:
               
chr4:12034346-12033985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
148, 113
               

               
Conread position:
               
18-125
               

               
Cow position:
               
chr4:19333465-19333358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-379
               

               
Cow position:
               
chr4:43865778-43866130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
23-342
               

               
Cow position:
               
chr4:65432224-65431903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 103
               

               
Conread position:
               
23-349
               

               
Cow position:
               
chr4:12561114-12560787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
23-361
               

               
Cow position:
               
chr4:961577-961924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
98, 253
               

               
Conread position:
               
23-365
               

               
Cow position:
               
chr4:23846977-23847316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
23-365
               

               
Cow position:
               
chr4:46591741-46591397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
23-372
               

               
Cow position:
               
chr4:34337198-34337534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr4:11021577-11021925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
123, 228
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr4:28771993-28772341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 213
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr4:51739643-51739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
23-376
               

               
Cow position:
               
chr4:45775264-45775617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 107
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:20986-20648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
158, 107
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:620061-620430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:12591140-12591489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:16799112-16799470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 257
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:19435329-19434983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:19597250-19597591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:62771846-62772213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr4:66111997-66112355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
23-379
               

               
Cow position:
               
chr4:508835-509177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
106, 124
               

               
Conread position:
               
23-381
               

               
Cow position:
               
chr4:23854254-23853923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr4:41370868-41371111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
24-349
               

               
Cow position:
               
chr4:19322005-19322328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 114
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr4:36893432-36893075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
25-279
               

               
Cow position:
               
chr4:45077004-45077252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 112
               

               
Conread position:
               
25-334
               

               
Cow position:
               
chr4:37344355-37344667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
5, 189
               

               
Conread position:
               
25-341
               

               
Cow position:
               
chr4:28836609-28836285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
25-361
               

               
Cow position:
               
chr4:23444974-23445312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 247
               

               
Conread position:
               
25-375
               

               
Cow position:
               
chr4:3388616-3388277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
196, 127
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr4:17111802-17112156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr4:18974496-18974159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
26-167
               

               
Cow position:
               
chr4:19493626-19493482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr4:20147254-20147016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
104, 120
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr4:46552266-46552508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr4:21257054-21257407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 158
               

               
Conread position:
               
29-246
               

               
Cow position:
               
chr4:33091441-33091229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
187, 101
               

               
Conread position:
               
29-265
               

               
Cow position:
               
chr4:27632511-27632284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr4:63873-64119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 113
               

               
Conread position:
               
29-324
               

               
Cow position:
               
chr4:44973702-44973418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
29-358
               

               
Cow position:
               
chr4:10379178-10378840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 316
               

               
Conread position:
               
29-358
               

               
Cow position:
               
chr4:47730926-47730604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 163
               

               
Conread position:
               
29-364
               

               
Cow position:
               
chr4:23526762-23526433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
146, 114
               

               
Conread position:
               
29-367
               

               
Cow position:
               
chr4:33612291-33612630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr4:24744338-24744685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 97
               

               
Conread position:
               
29-373
               

               
Cow position:
               
chr4:7571481-7571136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr4:5460793-5461128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr4:19008114-19007767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr4:21065104-21064764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr4:50203821-50203472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
29-377
               

               
Cow position:
               
chr4:15905170-15904821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 240
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr4:11187519-11187177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 109
               

               
Conread position:
               
29-414
               

               
Cow position:
               
chr4:59785390-59785003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 249
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr4:25806966-25806621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
31-354
               

               
Cow position:
               
chr4:49089843-49089540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr4:7433-7776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr4:11332162-11331891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 254
               

               
Conread position:
               
32-371
               

               
Cow position:
               
chr4:20299339-20298998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr4:27540682-27540345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
35-342
               

               
Cow position:
               
chr4:13043325-13043028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
134, 95
               

               
Conread position:
               
35-365
               

               
Cow position:
               
chr4:570854-570535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
107, 135
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr4:2894093-2893746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 226
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr4:42673238-42672893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
36-224
               

               
Cow position:
               
chr4:1419282-1419094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
36-243
               

               
Cow position:
               
chr4:30169769-30169970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr4:8947456-8947130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
36-375
               

               
Cow position:
               
chr4:52748396-52748733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr4:3687983-3687650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr4:22101204-22101545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
139, 94
               

               
Conread position:
               
36-379
               

               
Cow position:
               
chr4:39231460-39231802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
36-379
               

               
Cow position:
               
chr4:46550441-46550105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
37-357
               

               
Cow position:
               
chr4:25984276-25983970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
297, 92
               

               
Conread position:
               
37-361
               

               
Cow position:
               
chr4:10915776-10916098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr4:13590143-13589813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
128, 89
               

               
Conread position:
               
37-379
               

               
Cow position:
               
chr4:51851266-51850916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 134
               

               
Conread position:
               
38-278
               

               
Cow position:
               
chr4:31505965-31506214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
91, 145
               

               
Conread position:
               
38-322
               

               
Cow position:
               
chr4:16762667-16762954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
38-326
               

               
Cow position:
               
chr4:10999656-10999930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
179, 74
               

               
Conread position:
               
38-371
               

               
Cow position:
               
chr4:203084-203419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 110
               

               
Conread position:
               
38-375
               

               
Cow position:
               
chr4:21371450-21371125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 130
               

               
Conread position:
               
38-377
               

               
Cow position:
               
chr4:66256745-66256408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr4:1015129-1014789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr4:12030905-12030561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr4:10905406-10905740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
39-343
               

               
Cow position:
               
chr4:14945120-14944812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
39-372
               

               
Cow position:
               
chr4:15283424-15283091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr4:18095616-18095954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
40-372
               

               
Cow position:
               
chr4:44496430-44496112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 137
               

               
Conread position:
               
40-377
               

               
Cow position:
               
chr4:66172739-66173074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
40-378
               

               
Cow position:
               
chr4:25197438-25197775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
97, 87
               

               
Conread position:
               
40-378
               

               
Cow position:
               
chr4:47351860-47351529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
182, 98
               

               
Conread position:
               
41-376
               

               
Cow position:
               
chr4:34208993-34208652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
43-377
               

               
Cow position:
               
chr4:275514-275188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
43-378
               

               
Cow position:
               
chr4:44838838-44839163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
44-341
               

               
Cow position:
               
chr4:44956129-44956432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr4:19142328-19142010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 85
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr4:19497217-19497528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
49-246
               

               
Cow position:
               
chr4:47047942-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr4:46058739-46058970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
72-332
               

               
Cow position:
               
chr4:19463521-19463258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
72-356
               

               
Cow position:
               
chr4:62920842-62921113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr4:41867468-41867180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
72-377
               

               
Cow position:
               
chr4:2422601-2422305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
72-377
               

               
Cow position:
               
chr4:17124267-17124568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
74-314
               

               
Cow position:
               
chr4:14964801-14964563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
76-375
               

               
Cow position:
               
chr4:24458082-24458372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
77-378
               

               
Cow position:
               
chr4:45662491-45662778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
81-361
               

               
Cow position:
               
chr4:65825828-65826116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
81-381
               

               
Cow position:
               
chr4:53209253-53208956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
84-357
               

               
Cow position:
               
chr4:33357949-33357674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 221
               

               
Conread position:
               
88-364
               

               
Cow position:
               
chr4:67408536-67408277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
90-378
               

               
Cow position:
               
chr4:22215646-22215934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
91-373
               

               
Cow position:
               
chr4:36725047-36724769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
91-379
               

               
Cow position:
               
chr4:56233688-56233412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
95-361
               

               
Cow position:
               
chr4:43495899-43495641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
105-370
               

               
Cow position:
               
chr4:2141742-2141476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
107-379
               

               
Cow position:
               
chr4:33421366-33421640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
112-381
               

               
Cow position:
               
chr4:39009947-39009686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
137-375
               

               
Cow position:
               
chr4:27291996-27292234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
138-370
               

               
Cow position:
               
chr4:56513983-56514209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr4:44902392-44902215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
142-374
               

               
Cow position:
               
chr4:44072810-44073044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr4:69305603-69305378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
151-286
               

               
Cow position:
               
chr4:45574950-45574814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
171-361
               

               
Cow position:
               
chr4:10472148-10471962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
177-374
               

               
Cow position:
               
chr4:62570737-62570541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
178-378
               

               
Cow position:
               
chr4:10036444-10036248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
179-359
               

               
Cow position:
               
chr4:2536748-2536574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
180-332
               

               
Cow position:
               
chr4:41907876-41908024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
180-374
               

               
Cow position:
               
chr4:58947994-58948190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr4:64072433-64072630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 160
               
Show alignments to all cow chromosomes.