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Cow genome map

           
Conread name:
           
Liv1-LVRM10001H11
        

               
Conread position:
               
1-226
               

               
Cow position:
               
chr5:30233036-30232802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr5:11668056-11668417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
128, 145
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr5:66551768-66551968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr5:45574748-45574485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 249
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr5:34562145-34561813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr5:35969660-35969329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr5:62172540-62172190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr5:44752179-44752549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 170
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr5:53835844-53835475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr5:46509737-46510113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 202
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr5:64139688-64139318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 127
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr5:74580916-74580623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 100
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr5:44028180-44028480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr5:64175999-64176346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr5:21617585-21617210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 162
               

               
Conread position:
               
5-136
               

               
Cow position:
               
chr5:50824717-50824587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr5:26549015-26549177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 129
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr5:61102841-61102677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 91
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr5:69099845-69099674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr5:20288138-20288314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 127
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr5:26150296-26150483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 65
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr5:59626847-59627038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:29912545-29912349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr5:43403029-43402817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr5:54375377-54375610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 128
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr5:27171868-27172095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 81
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr5:64026894-64027149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
174, 122
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr5:70951764-70952021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr5:56877607-56877341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr5:12673353-12673620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
271, 59
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr5:42050677-42050391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr5:45397694-45397418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr5:30629032-30629323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr5:56014856-56014569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 162
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr5:30949790-30950088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 128
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr5:6286308-6286604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
170, 138
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr5:46512644-46512951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr5:61810896-61810608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
170, 86
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr5:48009734-48010036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr5:69461460-69461144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr5:44446740-44447082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr5:23168701-23169018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 197
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr5:50600173-50599857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr5:50943031-50943357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 108
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr5:57737224-57736904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
170, 133
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr5:15721949-15722275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
174, 125
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr5:16025343-16025682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr5:5257163-5257522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 226
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr5:22242640-22243011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr5:19813095-19813440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
145, 158
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr5:50821908-50821560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 281
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr5:57074206-57074563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 166
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr5:68718992-68718655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr5:11229548-11229905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr5:15426663-15426296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 96
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr5:24996098-24996456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr5:16893646-16894014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 196
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr5:63987321-63987685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
122, 59
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr5:30845235-30844873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr5:38833246-38832878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 78
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr5:25035133-25035467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr5:37646419-37646792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr5:3582685-3582350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr5:32338840-32339216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr5:37814751-37814382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
158, 204
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr5:15364007-15363648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr5:35685060-35684692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr5:40109617-40109259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr5:69337945-69337590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 124
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr5:21828992-21828621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr5:56524299-56523931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 165
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:4710027-4710389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:6045421-6045041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:14314653-14314277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 345
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:15598113-15598479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:16206030-16206387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:17086896-17087275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:30303016-30302653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:35826727-35826345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 128
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:50533263-50533629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:55177011-55176647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:63992047-63992409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 127
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:65941125-65941498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 165
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:66257761-66257397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr5:66339200-66338839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr5:29903398-29903768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 124
               

               
Conread position:
               
5-380
               

               
Cow position:
               
chr5:57934983-57935362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 133
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr5:45845563-45845943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 176
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr5:54060400-54060110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr5:42744904-42744556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr5:44993925-44994279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
122, 57
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr5:60183928-60183691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr5:49474422-49474659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
112, 196
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr5:56028418-56028752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr5:56070982-56070625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 327
               

               
Conread position:
               
7-365
               

               
Cow position:
               
chr5:25495235-25495570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
167, 96
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr5:55942256-55942642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 271
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr5:58793486-58793855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 118
               

               
Conread position:
               
9-378
               

               
Cow position:
               
chr5:9894002-9894372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 93
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr5:35763384-35763045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr5:59631594-59631301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
17-282
               

               
Cow position:
               
chr5:19524013-19523742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 113
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr5:61809573-61809854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
17-306
               

               
Cow position:
               
chr5:19335668-19335967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 266
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr5:57265791-57266074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 113
               

               
Conread position:
               
17-312
               

               
Cow position:
               
chr5:57591801-57591511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
127, 92
               

               
Conread position:
               
17-377
               

               
Cow position:
               
chr5:61576658-61576295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 113
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr5:4506852-4507206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 104
               

               
Conread position:
               
18-141
               

               
Cow position:
               
chr5:9233877-9234000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-249
               

               
Cow position:
               
chr5:64591983-64592212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 157
               

               
Conread position:
               
18-331
               

               
Cow position:
               
chr5:57575885-57575567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr5:30253853-30253517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 83
               

               
Conread position:
               
18-376
               

               
Cow position:
               
chr5:31640537-31640184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 158
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr5:28302631-28302985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr5:30276802-30276450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 114
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr5:66366621-66366286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
18-379
               

               
Cow position:
               
chr5:41545781-41546136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
19-378
               

               
Cow position:
               
chr5:47704015-47704380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 125
               

               
Conread position:
               
20-342
               

               
Cow position:
               
chr5:29213047-29212739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
23-241
               

               
Cow position:
               
chr5:58446914-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 106
               

               
Conread position:
               
23-248
               

               
Cow position:
               
chr5:49440764-49440991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 154
               

               
Conread position:
               
23-275
               

               
Cow position:
               
chr5:20422086-20422325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
23-298
               

               
Cow position:
               
chr5:65967624-65967897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
23-308
               

               
Cow position:
               
chr5:62639011-62638730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 85
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr5:56518115-56518409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
156, 93
               

               
Conread position:
               
23-357
               

               
Cow position:
               
chr5:72564871-72564538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 228
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr5:74016047-74015713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
23-364
               

               
Cow position:
               
chr5:67932365-67932692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
23-365
               

               
Cow position:
               
chr5:43992431-43992093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
23-372
               

               
Cow position:
               
chr5:43737856-43738187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 89
               

               
Conread position:
               
23-375
               

               
Cow position:
               
chr5:39447428-39447774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 106
               

               
Conread position:
               
23-375
               

               
Cow position:
               
chr5:54350254-54350603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
24-288
               

               
Cow position:
               
chr5:47696344-47696598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr5:45472393-45472090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 249
               

               
Conread position:
               
24-343
               

               
Cow position:
               
chr5:71494927-71494606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 245
               

               
Conread position:
               
24-351
               

               
Cow position:
               
chr5:62142782-62142452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 173
               

               
Conread position:
               
24-360
               

               
Cow position:
               
chr5:37646187-37645846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
24-375
               

               
Cow position:
               
chr5:54311442-54311091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr5:29828153-29827808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr5:56467796-56467459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr5:65932837-65933173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
157, 95
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr5:12902023-12901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 102
               

               
Conread position:
               
25-260
               

               
Cow position:
               
chr5:63426899-63427137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr5:65883666-65883922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
25-326
               

               
Cow position:
               
chr5:50215456-50215752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr5:8162712-8163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
25-342
               

               
Cow position:
               
chr5:11427127-11427451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
25-372
               

               
Cow position:
               
chr5:34887089-34887437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr5:17999390-17999741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr5:47316868-47317213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 128
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr5:50723152-50722805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 105
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr5:51151248-51151608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 125
               

               
Conread position:
               
25-379
               

               
Cow position:
               
chr5:31481254-31480907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 229
               

               
Conread position:
               
25-379
               

               
Cow position:
               
chr5:39299636-39299282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 139
               

               
Conread position:
               
26-163
               

               
Cow position:
               
chr5:31052484-31052352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
26-173
               

               
Cow position:
               
chr5:56338917-56339063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr5:67540095-67540343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
26-293
               

               
Cow position:
               
chr5:46425751-46426011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
26-322
               

               
Cow position:
               
chr5:7755465-7755742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
149, 95
               

               
Conread position:
               
26-360
               

               
Cow position:
               
chr5:8820909-8821239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
26-365
               

               
Cow position:
               
chr5:41165192-41164856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 210
               

               
Conread position:
               
26-375
               

               
Cow position:
               
chr5:47601916-47601575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 104
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr5:65752964-65752614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 76
               

               
Conread position:
               
27-280
               

               
Cow position:
               
chr5:63865899-63865644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
27-378
               

               
Cow position:
               
chr5:26990493-26990148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
29-173
               

               
Cow position:
               
chr5:63192640-63192785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr5:1087098-1087288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
140, 104
               

               
Conread position:
               
29-246
               

               
Cow position:
               
chr5:33560633-33560851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
29-259
               

               
Cow position:
               
chr5:44726233-44726456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 73
               

               
Conread position:
               
29-293
               

               
Cow position:
               
chr5:35247009-35247271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr5:45804161-45803847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chr5:32696722-32697041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
29-376
               

               
Cow position:
               
chr5:26097390-26097054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
29-377
               

               
Cow position:
               
chr5:64321855-64321504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 182
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr5:34050219-34049864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 237
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr5:19278605-19278939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr5:26094065-26094415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
119, 141
               

               
Conread position:
               
30-316
               

               
Cow position:
               
chr5:65136363-65136100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
246, 34
               

               
Conread position:
               
30-364
               

               
Cow position:
               
chr5:20779298-20779611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
33-354
               

               
Cow position:
               
chr5:740843-741170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr5:6503786-6504093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
107, 129
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr5:55068801-55068490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 98
               

               
Conread position:
               
35-363
               

               
Cow position:
               
chr5:23140494-23140803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr5:32153224-32153561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr5:48829249-48828902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
183, 80
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr5:59759494-59759145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 232
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr5:33080697-33081036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
106, 98
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr5:69520985-69520715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
36-323
               

               
Cow position:
               
chr5:14629716-14630008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 244
               

               
Conread position:
               
36-373
               

               
Cow position:
               
chr5:49685177-49685521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
91, 111
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr5:5110980-5111322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 93
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr5:6528777-6528435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 94
               

               
Conread position:
               
37-298
               

               
Cow position:
               
chr5:55956001-55955740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr5:25230919-25231259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr5:45273409-45273633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
38-269
               

               
Cow position:
               
chr5:57101690-57101916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
38-297
               

               
Cow position:
               
chr5:11539958-11540208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
38-328
               

               
Cow position:
               
chr5:7044613-7044905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 286
               

               
Conread position:
               
38-343
               

               
Cow position:
               
chr5:40039674-40039981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 210
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr5:36868829-36868517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
179, 133
               

               
Conread position:
               
38-368
               

               
Cow position:
               
chr5:17062989-17063329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
38-375
               

               
Cow position:
               
chr5:55966788-55967125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 99
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr5:24349199-24348868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr5:74643586-74643904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr5:3204922-3204590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr5:64523771-64524127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 298
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr5:9089931-9090271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 91
               

               
Conread position:
               
39-267
               

               
Cow position:
               
chr5:72951935-72951701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr5:5938413-5938079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 88
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr5:7698086-7697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
45-360
               

               
Cow position:
               
chr5:31144702-31145005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
45-361
               

               
Cow position:
               
chr5:46122268-46122577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr5:45170444-45170117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr5:34638967-34638640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 213
               

               
Conread position:
               
48-263
               

               
Cow position:
               
chr5:991546-991332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
51-361
               

               
Cow position:
               
chr5:27155096-27154794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
55-376
               

               
Cow position:
               
chr5:43474920-43474604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
56-317
               

               
Cow position:
               
chr5:6670119-6670382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
92, 131
               

               
Conread position:
               
59-378
               

               
Cow position:
               
chr5:34916202-34915897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 83
               

               
Conread position:
               
66-379
               

               
Cow position:
               
chr5:3280808-3281114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
71-367
               

               
Cow position:
               
chr5:3627093-3627402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
72-360
               

               
Cow position:
               
chr5:64823253-64823540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
72-379
               

               
Cow position:
               
chr5:32956036-32956336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
73-347
               

               
Cow position:
               
chr5:35235652-35235923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
81-350
               

               
Cow position:
               
chr5:60126422-60126156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
67, 155
               

               
Conread position:
               
81-375
               

               
Cow position:
               
chr5:4797274-4797553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
82-381
               

               
Cow position:
               
chr5:6086512-6086810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
84-378
               

               
Cow position:
               
chr5:27015726-27015447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
122-378
               

               
Cow position:
               
chr5:6575581-6575828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
130-394
               

               
Cow position:
               
chr5:56433801-56433537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr5:45037015-45036785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
133-370
               

               
Cow position:
               
chr5:35145349-35145115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
133-375
               

               
Cow position:
               
chr5:32963637-32963871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
144-374
               

               
Cow position:
               
chr5:68604845-68604618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr5:30816705-30816470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
149-371
               

               
Cow position:
               
chr5:60520143-60519928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
151-374
               

               
Cow position:
               
chr5:6033220-6032997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
152-376
               

               
Cow position:
               
chr5:72150225-72150007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr5:46103965-46104177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
157-359
               

               
Cow position:
               
chr5:12672057-12672253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
159-354
               

               
Cow position:
               
chr5:37366872-37366676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
174-375
               

               
Cow position:
               
chr5:48178720-48178918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
180-377
               

               
Cow position:
               
chr5:63917461-63917654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr5:69099481-69099281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
164, 0
               
Show alignments to all cow chromosomes.