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Cow genome map

           
Conread name:
           
Liv1-LVRM10001H11
        

               
Conread position:
               
1-192
               

               
Cow position:
               
chr7:56886364-56886556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr7:48243817-48243452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 102
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr7:59168409-59168081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr7:10293-9930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr7:44049227-44049587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr7:40067804-40067432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr7:58170883-58170514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
111, 122
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr7:1262173-1261793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 183
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr7:19981702-19982067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
177, 125
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr7:26631668-26632040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 244
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr7:33386066-33385700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
148, 134
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr7:20537511-20537105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 252
               

               
Conread position:
               
3-136
               

               
Cow position:
               
chr7:12494977-12495110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr7:168523-168722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 129
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr7:14524622-14524317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
176, 135
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr7:62733323-62732970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr7:31694496-31694839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 136
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr7:56820442-56820796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 14
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr7:23456678-23457044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 129
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr7:45927021-45927383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr7:21166102-21166387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr7:34428717-34428332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr7:36278440-36278065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
5-147
               

               
Cow position:
               
chr7:26871850-26871993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
5-161
               

               
Cow position:
               
chr7:598385-598227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 143
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr7:29505256-29505096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr7:49405428-49405269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 140
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr7:26263509-26263685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr7:29122041-29121848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr7:14317083-14316879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 110
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr7:35300276-35300500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr7:8658656-8658429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 119
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr7:15533934-15534162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 126
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr7:42637112-42636876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
170, 89
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr7:13228438-13228681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
143, 127
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr7:5199410-5199660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr7:28544317-28544065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr7:32946209-32945963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 124
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr7:58350825-58351077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
170, 76
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr7:11958298-11958552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr7:49903913-49903652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr7:42593130-42593417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr7:2579096-2579389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 250
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr7:4764986-4764681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 98
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr7:46818354-46818660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
5-315
               

               
Cow position:
               
chr7:8977683-8977988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr7:33990093-33989793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
144, 7
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr7:29479668-29479352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr7:31497851-31497548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr7:43908347-43908025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr7:48714995-48714657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr7:50860148-50859818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr7:4720090-4720431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr7:6042113-6041786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr7:26737205-26737544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 125
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr7:63946445-63946780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
170, 140
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr7:41315295-41315648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr7:4129639-4130001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 142
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr7:5027029-5027350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr7:41871964-41872302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr7:61552061-61551701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 188
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr7:53053261-53053618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 197
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr7:22793485-22793132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 113
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr7:44596561-44596904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr7:27283815-27283463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 58
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr7:29300626-29300974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 173
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr7:37362017-37361668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr7:57593571-57593225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
141, 187
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr7:65122473-65122122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 65
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr7:17816890-17816534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
143, 124
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr7:24220809-24220449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
124, 142
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr7:48020569-48020212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr7:66748398-66748747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 65
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr7:10448662-10449008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr7:17713330-17713689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 118
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr7:28917232-28916866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 334
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr7:40263516-40263878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr7:52382838-52383197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr7:3256204-3256569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 280
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr7:49751265-49750898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr7:53785837-53786184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr7:54712562-54712190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 345
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr7:27079769-27079407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr7:34422130-34422488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr7:63749335-63749706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 172
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr7:49106060-49106430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:6058269-6057901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 165
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:10512572-10512941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:10943419-10943781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 98
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:14536140-14536500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:14632506-14632148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:18508401-18508756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:20968565-20968203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:23646752-23646374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:23679444-23679824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:32894107-32894482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 197
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:32915256-32914883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:35893557-35893182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:39325867-39325514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:39904236-39903875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:40074825-40074465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 196
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:45331679-45331316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:53382336-53381965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:53697766-53698145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:53772173-53772543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:53806682-53807044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:60483287-60483651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:62793938-62793554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 272
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr7:63707176-63707520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr7:20535013-20534652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 152
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr7:36534164-36533799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr7:46856822-46857184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 124
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr7:30931836-30932208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr7:48359146-48358788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr7:15559826-15559586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
135, 152
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr7:40406788-40406450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr7:23205489-23205862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr7:39416049-39415675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
9-378
               

               
Cow position:
               
chr7:58301802-58302174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr7:33393446-33393081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 159
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr7:8777345-8776974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 284
               

               
Conread position:
               
11-375
               

               
Cow position:
               
chr7:36996497-36996152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
11-377
               

               
Cow position:
               
chr7:40567206-40566846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr7:32372989-32372684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
17-255
               

               
Cow position:
               
chr7:40425183-40425426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 119
               

               
Conread position:
               
17-289
               

               
Cow position:
               
chr7:9781595-9781871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr7:18856860-18857135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
17-299
               

               
Cow position:
               
chr7:14482195-14481907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 100
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr7:10075148-10074833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr7:32284050-32283684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr7:39167592-39167236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
111, 159
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr7:64268865-64269214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
113, 150
               

               
Conread position:
               
17-379
               

               
Cow position:
               
chr7:39939865-39939509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 154
               

               
Conread position:
               
17-381
               

               
Cow position:
               
chr7:27509844-27509484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 110
               

               
Conread position:
               
18-229
               

               
Cow position:
               
chr7:8102549-8102338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
18-311
               

               
Cow position:
               
chr7:21565436-21565712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
18-365
               

               
Cow position:
               
chr7:51319935-51319584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
18-371
               

               
Cow position:
               
chr7:25496852-25496518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr7:23936239-23935891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 84
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr7:55085783-55085518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
161, 124
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr7:31503974-31503690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
156, 111
               

               
Conread position:
               
19-379
               

               
Cow position:
               
chr7:64228765-64229123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 242
               

               
Conread position:
               
23-257
               

               
Cow position:
               
chr7:11854618-11854383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 167
               

               
Conread position:
               
23-265
               

               
Cow position:
               
chr7:58923521-58923276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 125
               

               
Conread position:
               
23-278
               

               
Cow position:
               
chr7:8272785-8272526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
23-282
               

               
Cow position:
               
chr7:34214714-34214462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
158, 115
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr7:52718516-52718845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
23-361
               

               
Cow position:
               
chr7:29510067-29509742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
23-365
               

               
Cow position:
               
chr7:8868950-8868603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
23-367
               

               
Cow position:
               
chr7:47698128-47697807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
23-367
               

               
Cow position:
               
chr7:48406370-48406718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
23-368
               

               
Cow position:
               
chr7:45956052-45955708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 124
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr7:147538-147186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
23-375
               

               
Cow position:
               
chr7:25512001-25512346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
146, 98
               

               
Conread position:
               
23-376
               

               
Cow position:
               
chr7:9193114-9193470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 174
               

               
Conread position:
               
23-377
               

               
Cow position:
               
chr7:47513562-47513917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
23-377
               

               
Cow position:
               
chr7:64364405-64364756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr7:11066602-11066245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr7:28563267-28563611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
187, 106
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr7:37142250-37142593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
23-379
               

               
Cow position:
               
chr7:2884460-2884114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
23-381
               

               
Cow position:
               
chr7:44454157-44454497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
24-275
               

               
Cow position:
               
chr7:5212354-5212608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
24-347
               

               
Cow position:
               
chr7:3283481-3283163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
24-347
               

               
Cow position:
               
chr7:3311961-3311643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
24-358
               

               
Cow position:
               
chr7:39930406-39930089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
128, 28
               

               
Conread position:
               
24-365
               

               
Cow position:
               
chr7:12408119-12408456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr7:57537401-57537747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
24-381
               

               
Cow position:
               
chr7:21650221-21649871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 106
               

               
Conread position:
               
24-381
               

               
Cow position:
               
chr7:31315431-31315089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 108
               

               
Conread position:
               
25-299
               

               
Cow position:
               
chr7:57660043-57660312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 118
               

               
Conread position:
               
25-330
               

               
Cow position:
               
chr7:25195664-25195354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
5, 130
               

               
Conread position:
               
25-349
               

               
Cow position:
               
chr7:25960588-25960272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
5, 119
               

               
Conread position:
               
25-377
               

               
Cow position:
               
chr7:25415516-25415168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
25-379
               

               
Cow position:
               
chr7:50772610-50772961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
5, 107
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr7:14519919-14520271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
5, 106
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr7:60732518-60732715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
26-254
               

               
Cow position:
               
chr7:9926610-9926840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr7:35274960-35275300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
26-379
               

               
Cow position:
               
chr7:30276855-30276503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 131
               

               
Conread position:
               
28-327
               

               
Cow position:
               
chr7:3773148-3773448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
28-381
               

               
Cow position:
               
chr7:43711334-43710988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr7:6608347-6608094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr7:49417723-49417479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
97, 112
               

               
Conread position:
               
29-324
               

               
Cow position:
               
chr7:20219723-20220014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
101, 117
               

               
Conread position:
               
29-341
               

               
Cow position:
               
chr7:535599-535917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 178
               

               
Conread position:
               
29-341
               

               
Cow position:
               
chr7:14174309-14174601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
29-363
               

               
Cow position:
               
chr7:255702-256022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr7:8877997-8877656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
115, 142
               

               
Conread position:
               
29-374
               

               
Cow position:
               
chr7:20525-20176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr7:33298327-33298646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
29-375
               

               
Cow position:
               
chr7:59558060-59558388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
194, 58
               

               
Conread position:
               
29-376
               

               
Cow position:
               
chr7:1720853-1721195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:8812820-8813155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 91
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:19466133-19466490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:40008946-40008589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 240
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:40710245-40709880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 292
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:45158239-45157904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
125, 161
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:47547526-47547166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
113, 291
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:47931679-47932024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:53097708-53097370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
98, 219
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr7:66894422-66894769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 111
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr7:41293629-41293979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 134
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr7:57258906-57259260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 140
               

               
Conread position:
               
29-382
               

               
Cow position:
               
chr7:29279903-29280253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
238, 57
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr7:2923764-2923413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr7:9136954-9136610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr7:4863933-4864216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
31-372
               

               
Cow position:
               
chr7:36717356-36717684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr7:39150065-39149708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
35-332
               

               
Cow position:
               
chr7:5723814-5723514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
35-375
               

               
Cow position:
               
chr7:40510754-40510409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
35-376
               

               
Cow position:
               
chr7:37569160-37568803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr7:39155225-39154879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
102, 231
               

               
Conread position:
               
35-378
               

               
Cow position:
               
chr7:63378505-63378164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
35-381
               

               
Cow position:
               
chr7:14005992-14005641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
36-227
               

               
Cow position:
               
chr7:60870051-60869866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
36-352
               

               
Cow position:
               
chr7:11011572-11011895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
36-356
               

               
Cow position:
               
chr7:50066006-50066319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 126
               

               
Conread position:
               
36-358
               

               
Cow position:
               
chr7:3336440-3336758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr7:17967016-17967343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr7:50095497-50095156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr7:68170490-68170822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr7:9660940-9661268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr7:18544271-18544604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 96
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr7:26485683-26485354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
36-378
               

               
Cow position:
               
chr7:36665435-36665101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 76
               

               
Conread position:
               
36-381
               

               
Cow position:
               
chr7:23568626-23568972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr7:11783319-11783647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
38-306
               

               
Cow position:
               
chr7:46051764-46051498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 228
               

               
Conread position:
               
38-323
               

               
Cow position:
               
chr7:39644614-39644327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr7:40121580-40121267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 203
               

               
Conread position:
               
38-354
               

               
Cow position:
               
chr7:33279889-33280194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
38-375
               

               
Cow position:
               
chr7:37455426-37455096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr7:63112667-63112998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
179, 143
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr7:22623994-22624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
39-376
               

               
Cow position:
               
chr7:18388292-18388625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr7:45593146-45592808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 94
               

               
Conread position:
               
42-373
               

               
Cow position:
               
chr7:40405949-40405628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
42-378
               

               
Cow position:
               
chr7:14541965-14542280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
46-359
               

               
Cow position:
               
chr7:31170848-31171162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
52-258
               

               
Cow position:
               
chr7:14353694-14353902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
55-378
               

               
Cow position:
               
chr7:30307834-30307517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
57-374
               

               
Cow position:
               
chr7:47046545-47046260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
63-377
               

               
Cow position:
               
chr7:39988490-39988181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 200
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr7:25015041-25015342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr7:42460514-42460212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
67-374
               

               
Cow position:
               
chr7:25023379-25023682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
72-349
               

               
Cow position:
               
chr7:10122772-10122510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
72-350
               

               
Cow position:
               
chr7:41879415-41879703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 187
               

               
Conread position:
               
72-372
               

               
Cow position:
               
chr7:28584321-28584026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
72-374
               

               
Cow position:
               
chr7:56838432-56838722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
72-378
               

               
Cow position:
               
chr7:51910203-51909900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
74-378
               

               
Cow position:
               
chr7:32819891-32819583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr7:34979448-34979144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
84-379
               

               
Cow position:
               
chr7:46148921-46148636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
87-371
               

               
Cow position:
               
chr7:26771930-26771662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
90-379
               

               
Cow position:
               
chr7:23619033-23619315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
104-376
               

               
Cow position:
               
chr7:47503698-47503432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 162
               

               
Conread position:
               
105-378
               

               
Cow position:
               
chr7:28090275-28090012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
105-378
               

               
Cow position:
               
chr7:56886743-56887008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr7:58447236-58447003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
127-315
               

               
Cow position:
               
chr7:6820915-6820722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr7:12658980-12659227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
137-364
               

               
Cow position:
               
chr7:34716257-34716031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
153-319
               

               
Cow position:
               
chr7:5399050-5399217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
158-335
               

               
Cow position:
               
chr7:6800563-6800741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
171-333
               

               
Cow position:
               
chr7:23477349-23477501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
173-370
               

               
Cow position:
               
chr7:27136475-27136276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
180-331
               

               
Cow position:
               
chr7:35793081-35792935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
180-375
               

               
Cow position:
               
chr7:20827655-20827841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
180-377
               

               
Cow position:
               
chr7:18302930-18303126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr7:18247840-18248039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 84
               
Show alignments to all cow chromosomes.