Cow genome map

Conread name: Liv1-LVRM10001H11

Conread position: 2-243
Cow position: chrX:33539299-33539052 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 167, 114

Conread position: 2-250
Cow position: chrX:26881436-26881688 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 143, 0

Conread position: 2-273
Cow position: chrX:11614822-11614556 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 173, 55

Conread position: 2-286
Cow position: chrX:21986162-21986450 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 131, 96

Conread position: 2-305
Cow position: chrX:34792183-34792482 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 46

Conread position: 2-307
Cow position: chrX:22387121-22387421 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 173, 68

Conread position: 2-322
Cow position: chrX:42235395-42235722 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 121, 137

Conread position: 2-351
Cow position: chrX:29121176-29120841 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 146, 135

Conread position: 2-354
Cow position: chrX:46072688-46073042 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 125, 245

Conread position: 2-355
Cow position: chrX:37574969-37574635 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 2-372
Cow position: chrX:8925827-8925465 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 10

Conread position: 2-374
Cow position: chrX:33493905-33493535 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 58

Conread position: 2-376
Cow position: chrX:40035311-40035693 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 87

Conread position: 2-377
Cow position: chrX:45429893-45430261 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 125

Conread position: 2-378
Cow position: chrX:7278040-7277683 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 2-378
Cow position: chrX:34402135-34401753 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 2-379
Cow position: chrX:45502275-45501903 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 126

Conread position: 3-319
Cow position: chrX:31252535-31252230 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 37

Conread position: 3-343
Cow position: chrX:45846229-45845886 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 91

Conread position: 3-354
Cow position: chrX:1503455-1503119 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 108, 81

Conread position: 3-366
Cow position: chrX:5900590-5900225 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 177, 59

Conread position: 3-378
Cow position: chrX:34377070-34376713 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 172, 112

Conread position: 3-378
Cow position: chrX:42171168-42171543 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 35

Conread position: 4-272
Cow position: chrX:22453972-22454234 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 8

Conread position: 4-310
Cow position: chrX:47165760-47166061 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 171, 13

Conread position: 4-329
Cow position: chrX:47484138-47484467 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 143, 13

Conread position: 5-135
Cow position: chrX:2936083-2935953 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-173
Cow position: chrX:22392858-22393028 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 143, 0

Conread position: 5-173
Cow position: chrX:27306580-27306410 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 5-185
Cow position: chrX:46429693-46429875 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 172

Conread position: 5-187
Cow position: chrX:19469380-19469563 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 139

Conread position: 5-196
Cow position: chrX:12082198-12082391 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 59

Conread position: 5-211
Cow position: chrX:18272932-18273139 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 144, 58

Conread position: 5-221
Cow position: chrX:29050373-29050156 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 59

Conread position: 5-234
Cow position: chrX:34836938-34837158 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 5-235
Cow position: chrX:11851553-11851775 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 27

Conread position: 5-243
Cow position: chrX:29230125-29229896 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 176, 95

Conread position: 5-244
Cow position: chrX:42927698-42927933 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 174, 125

Conread position: 5-258
Cow position: chrX:34315647-34315396 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 165

Conread position: 5-260
Cow position: chrX:43115276-43115021 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 150, 72

Conread position: 5-261
Cow position: chrX:19273581-19273854 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 5-262
Cow position: chrX:40685202-40685463 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 5-274
Cow position: chrX:34314150-34313889 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 143, 97

Conread position: 5-277
Cow position: chrX:38066329-38066597 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 153

Conread position: 5-282
Cow position: chrX:20584454-20584170 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 129

Conread position: 5-283
Cow position: chrX:616133-616416 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 5-297
Cow position: chrX:41068851-41068564 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 224

Conread position: 5-298
Cow position: chrX:14275617-14275900 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 137, 172

Conread position: 5-324
Cow position: chrX:31312155-31311835 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 172

Conread position: 5-325
Cow position: chrX:43730098-43730406 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 125, 89

Conread position: 5-340
Cow position: chrX:41526403-41526730 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 40

Conread position: 5-342
Cow position: chrX:38853323-38852988 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 59

Conread position: 5-345
Cow position: chrX:8869276-8869620 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 125

Conread position: 5-348
Cow position: chrX:34411972-34411625 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 229

Conread position: 5-353
Cow position: chrX:6414167-6413827 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 50

Conread position: 5-361
Cow position: chrX:37232533-37232182 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 117

Conread position: 5-364
Cow position: chrX:42380986-42381330 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 122

Conread position: 5-365
Cow position: chrX:9201674-9201316 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 139

Conread position: 5-367
Cow position: chrX:12979708-12980062 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 161

Conread position: 5-368
Cow position: chrX:35543013-35542657 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 76

Conread position: 5-368
Cow position: chrX:38549573-38549214 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 143

Conread position: 5-371
Cow position: chrX:6690134-6690485 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 174, 125

Conread position: 5-372
Cow position: chrX:14883829-14884200 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-372
Cow position: chrX:17795107-17794747 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 175

Conread position: 5-372
Cow position: chrX:17888297-17888644 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 57

Conread position: 5-373
Cow position: chrX:11938807-11939163 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 129

Conread position: 5-374
Cow position: chrX:33855094-33855473 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 35

Conread position: 5-374
Cow position: chrX:38642375-38642020 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 124

Conread position: 5-374
Cow position: chrX:41884286-41884658 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 5-375
Cow position: chrX:1514293-1514645 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 125, 59

Conread position: 5-375
Cow position: chrX:39558223-39558591 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 40

Conread position: 5-376
Cow position: chrX:7695875-7695519 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 59

Conread position: 5-376
Cow position: chrX:27431792-27432161 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 126

Conread position: 5-378
Cow position: chrX:4996713-4996367 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 54

Conread position: 5-378
Cow position: chrX:6544380-6544012 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 56

Conread position: 5-378
Cow position: chrX:9650898-9651289 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 380

Conread position: 5-378
Cow position: chrX:13647659-13648028 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 161

Conread position: 5-378
Cow position: chrX:17726101-17725734 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 128

Conread position: 5-378
Cow position: chrX:22482565-22482933 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 53

Conread position: 5-378
Cow position: chrX:31436600-31436236 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 124

Conread position: 5-378
Cow position: chrX:34532646-34532287 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 164

Conread position: 5-378
Cow position: chrX:37072515-37072162 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 5-378
Cow position: chrX:38094394-38094769 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 59

Conread position: 5-378
Cow position: chrX:40269618-40269232 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 5-378
Cow position: chrX:41192830-41192446 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 339

Conread position: 5-378
Cow position: chrX:42469815-42470181 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 168

Conread position: 5-379
Cow position: chrX:11656207-11655841 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 128

Conread position: 5-379
Cow position: chrX:35273490-35273099 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 69

Conread position: 5-379
Cow position: chrX:40557553-40557921 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 267

Conread position: 5-381
Cow position: chrX:31294446-31294789 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 169, 109

Conread position: 5-382
Cow position: chrX:11073065-11073441 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 143

Conread position: 5-383
Cow position: chrX:5017296-5017655 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 81, 25

Conread position: 6-208
Cow position: chrX:4152906-4153113 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 6-265
Cow position: chrX:41871192-41870938 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 164

Conread position: 7-222
Cow position: chrX:1466286-1466069 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 135, 0

Conread position: 7-271
Cow position: chrX:9365552-9365815 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 34

Conread position: 7-331
Cow position: chrX:37780985-37781315 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 7-370
Cow position: chrX:9252039-9252414 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 96

Conread position: 7-381
Cow position: chrX:45414180-45414547 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 122

Conread position: 9-375
Cow position: chrX:24424279-24424630 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 115

Conread position: 9-378
Cow position: chrX:878258-878615 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 168

Conread position: 15-378
Cow position: chrX:7572021-7571662 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 207

Conread position: 17-365
Cow position: chrX:48010718-48010363 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 129, 0

Conread position: 17-371
Cow position: chrX:47873222-47873578 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 127, 113

Conread position: 17-375
Cow position: chrX:22813176-22812821 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 81

Conread position: 17-378
Cow position: chrX:488618-488246 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 111

Conread position: 17-378
Cow position: chrX:31948821-31949175 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 166

Conread position: 18-284
Cow position: chrX:5118385-5118656 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 154

Conread position: 18-375
Cow position: chrX:9416571-9416934 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 88

Conread position: 18-378
Cow position: chrX:161525-161184 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 115

Conread position: 19-335
Cow position: chrX:29544765-29545081 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 125

Conread position: 19-378
Cow position: chrX:29289690-29289332 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 126

Conread position: 20-254
Cow position: chrX:27945943-27946183 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 144

Conread position: 23-199
Cow position: chrX:22115209-22115385 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 158, 109

Conread position: 23-261
Cow position: chrX:34504940-34505178 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 117

Conread position: 23-271
Cow position: chrX:21566515-21566261 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 128

Conread position: 23-278
Cow position: chrX:29680153-29680409 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 114

Conread position: 23-324
Cow position: chrX:23785754-23785463 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 23-351
Cow position: chrX:37910553-37910235 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 114, 149

Conread position: 23-354
Cow position: chrX:10959287-10959623 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 131

Conread position: 23-354
Cow position: chrX:29601720-29602053 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 230

Conread position: 23-372
Cow position: chrX:11082514-11082851 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 103

Conread position: 23-372
Cow position: chrX:42492415-42492748 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 197, 106

Conread position: 23-374
Cow position: chrX:21004792-21004444 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 229

Conread position: 23-374
Cow position: chrX:23513909-23514258 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 39

Conread position: 23-374
Cow position: chrX:27393918-27394254 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 110

Conread position: 23-374
Cow position: chrX:45968256-45967922 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 313, 107

Conread position: 23-376
Cow position: chrX:10411878-10412228 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 125

Conread position: 23-376
Cow position: chrX:13913183-13912837 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 163

Conread position: 23-376
Cow position: chrX:38936808-38936459 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 62

Conread position: 23-378
Cow position: chrX:38006662-38007012 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 40

Conread position: 23-379
Cow position: chrX:45174958-45174599 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 124

Conread position: 23-381
Cow position: chrX:17964414-17964767 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 112, 88

Conread position: 24-246
Cow position: chrX:24331884-24331662 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 89

Conread position: 24-332
Cow position: chrX:1499772-1499471 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 103

Conread position: 24-359
Cow position: chrX:9041137-9041454 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 35

Conread position: 24-364
Cow position: chrX:37489826-37489500 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 193, 106

Conread position: 24-370
Cow position: chrX:7646358-7646022 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 91

Conread position: 24-374
Cow position: chrX:42011388-42011040 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 91

Conread position: 24-378
Cow position: chrX:1615936-1616295 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 53

Conread position: 24-378
Cow position: chrX:34503027-34502676 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 122

Conread position: 24-378
Cow position: chrX:46770855-46771216 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 106

Conread position: 25-306
Cow position: chrX:46433598-46433310 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 119

Conread position: 25-345
Cow position: chrX:47300796-47301115 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 106

Conread position: 25-345
Cow position: chrX:47302770-47303091 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 106

Conread position: 25-364
Cow position: chrX:3130679-3130351 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 108

Conread position: 25-365
Cow position: chrX:47967714-47967368 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 231

Conread position: 25-375
Cow position: chrX:48652614-48652968 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 5, 106

Conread position: 25-378
Cow position: chrX:20697502-20697850 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 105

Conread position: 25-378
Cow position: chrX:34554830-34554486 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 101

Conread position: 25-378
Cow position: chrX:45089553-45089193 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 112

Conread position: 25-379
Cow position: chrX:12309279-12309634 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 155

Conread position: 26-372
Cow position: chrX:27680503-27680165 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 122, 163

Conread position: 26-376
Cow position: chrX:8797354-8797006 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 36

Conread position: 28-377
Cow position: chrX:48194932-48195284 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 102, 241

Conread position: 28-378
Cow position: chrX:46722631-46722985 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 102

Conread position: 28-379
Cow position: chrX:45403722-45404079 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 79

Conread position: 29-269
Cow position: chrX:18204361-18204602 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 107

Conread position: 29-297
Cow position: chrX:35885625-35885893 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 141

Conread position: 29-311
Cow position: chrX:47186222-47186498 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 171, 116

Conread position: 29-331
Cow position: chrX:33001007-33000706 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 101

Conread position: 29-359
Cow position: chrX:21642380-21642703 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 91

Conread position: 29-364
Cow position: chrX:42247080-42247414 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 194

Conread position: 29-365
Cow position: chrX:6278396-6278737 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 29-365
Cow position: chrX:22822148-22821816 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 100

Conread position: 29-374
Cow position: chrX:26493108-26492762 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 84, 122

Conread position: 29-374
Cow position: chrX:35224398-35224062 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 205

Conread position: 29-376
Cow position: chrX:38218816-38218473 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 139

Conread position: 29-377
Cow position: chrX:27446788-27446445 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 152, 98

Conread position: 29-378
Cow position: chrX:15545984-15545653 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 91

Conread position: 29-378
Cow position: chrX:38964210-38963865 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 103

Conread position: 29-378
Cow position: chrX:41674206-41673858 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 148, 104

Conread position: 29-378
Cow position: chrX:44054904-44054558 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 116

Conread position: 29-379
Cow position: chrX:8731195-8730834 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 31

Conread position: 29-379
Cow position: chrX:25035280-25035632 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 125

Conread position: 29-379
Cow position: chrX:28878072-28878407 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 102

Conread position: 30-332
Cow position: chrX:43779746-43780051 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 97, 116

Conread position: 30-378
Cow position: chrX:25815800-25816140 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 151

Conread position: 30-378
Cow position: chrX:47344397-47344050 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 171

Conread position: 35-298
Cow position: chrX:22921417-22921149 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 109, 258

Conread position: 35-340
Cow position: chrX:46587918-46587611 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 115

Conread position: 35-345
Cow position: chrX:842253-841947 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 95

Conread position: 35-365
Cow position: chrX:17231831-17231503 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 103

Conread position: 35-374
Cow position: chrX:40826655-40826987 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 109, 87

Conread position: 35-378
Cow position: chrX:2467980-2467636 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 129

Conread position: 35-378
Cow position: chrX:11844145-11844485 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 133

Conread position: 36-274
Cow position: chrX:5919587-5919352 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 111, 140

Conread position: 36-352
Cow position: chrX:11633777-11633460 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 112, 233

Conread position: 37-350
Cow position: chrX:47145179-47144871 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 82

Conread position: 37-375
Cow position: chrX:19690309-19689979 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 90

Conread position: 37-378
Cow position: chrX:20339798-20340135 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 72

Conread position: 37-378
Cow position: chrX:24365727-24366073 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 142

Conread position: 38-260
Cow position: chrX:45875485-45875261 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 106

Conread position: 38-274
Cow position: chrX:47279839-47280076 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 24

Conread position: 38-294
Cow position: chrX:24788489-24788235 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 71

Conread position: 38-295
Cow position: chrX:8917487-8917231 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 137, 105

Conread position: 38-298
Cow position: chrX:15231567-15231822 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 184, 93

Conread position: 38-309
Cow position: chrX:4279025-4279290 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 108

Conread position: 38-331
Cow position: chrX:40809786-40809489 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 230

Conread position: 38-332
Cow position: chrX:1175890-1176181 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 109, 12

Conread position: 38-361
Cow position: chrX:11856523-11856202 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 227

Conread position: 38-370
Cow position: chrX:15815177-15814861 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 82, 106

Conread position: 38-370
Cow position: chrX:46532402-46532745 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 182

Conread position: 38-372
Cow position: chrX:40480779-40481109 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 38-374
Cow position: chrX:34543877-34543547 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 128

Conread position: 38-377
Cow position: chrX:12290812-12290493 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 106, 89

Conread position: 38-378
Cow position: chrX:3654701-3654360 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 35

Conread position: 38-378
Cow position: chrX:23583654-23583314 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 109

Conread position: 38-379
Cow position: chrX:10831394-10831757 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 38-379
Cow position: chrX:41878841-41879176 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 26

Conread position: 38-379
Cow position: chrX:46032634-46032963 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 39-375
Cow position: chrX:34662754-34663080 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 90, 215

Conread position: 40-266
Cow position: chrX:31729533-31729307 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 96

Conread position: 40-375
Cow position: chrX:30133227-30133565 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 102, 219

Conread position: 41-283
Cow position: chrX:12405291-12405540 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 96, 89

Conread position: 41-345
Cow position: chrX:29542127-29542430 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 92

Conread position: 44-381
Cow position: chrX:20710161-20709823 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 104, 63

Conread position: 46-274
Cow position: chrX:29723825-29723597 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 92

Conread position: 46-378
Cow position: chrX:5638084-5638413 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 100, 81

Conread position: 46-378
Cow position: chrX:42507563-42507891 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 119, 81

Conread position: 49-374
Cow position: chrX:618920-619248 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 84

Conread position: 50-377
Cow position: chrX:678474-678811 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 136

Conread position: 55-378
Cow position: chrX:34991115-34990797 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 72-298
Cow position: chrX:41991986-41992206 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 53

Conread position: 72-313
Cow position: chrX:48044140-48044379 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 207, 86

Conread position: 72-374
Cow position: chrX:26875822-26876121 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 202

Conread position: 73-358
Cow position: chrX:13785302-13785591 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 257

Conread position: 78-256
Cow position: chrX:19003350-19003174 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 68

Conread position: 81-354
Cow position: chrX:42461694-42461966 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 64

Conread position: 81-381
Cow position: chrX:19015487-19015195 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 94

Conread position: 89-359
Cow position: chrX:13265589-13265845 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 90, 32

Conread position: 98-378
Cow position: chrX:38439514-38439229 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 109-378
Cow position: chrX:20583044-20582786 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 117-359
Cow position: chrX:20791809-20792043 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 8

Conread position: 137-319
Cow position: chrX:31256861-31256682 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 115

Conread position: 138-378
Cow position: chrX:35387909-35388151 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 146-368
Cow position: chrX:2383474-2383255 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 121

Conread position: 157-378
Cow position: chrX:9997361-9997577 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 124

Conread position: 167-374
Cow position: chrX:23970347-23970149 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 180-323
Cow position: chrX:24149591-24149450 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 180-368
Cow position: chrX:36840826-36840639 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 39

Show alignments to all cow chromosomes.