Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 1-306 |
| Cow position: | chr10:32912266-32912581 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 13-395 |
| Cow position: | chr10:48354710-48355087 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 126 |
| Conread position: | 14-204 |
| Cow position: | chr10:15536722-15536530 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 14-513 |
| Cow position: | chr10:36036368-36035866 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 21 |
| Conread position: | 15-306 |
| Cow position: | chr10:133764-133462 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 268 |
| Conread position: | 17-166 |
| Cow position: | chr10:23859518-23859670 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 59 |
| Conread position: | 29-361 |
| Cow position: | chr10:66000994-66000657 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 29-370 |
| Cow position: | chr10:350218-349871 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 29-372 |
| Cow position: | chr10:16733076-16732717 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 158 |
| Conread position: | 30-361 |
| Cow position: | chr10:12404508-12404846 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 62, 253 |
| Conread position: | 32-367 |
| Cow position: | chr10:33720311-33720648 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 52-362 |
| Cow position: | chr10:36211681-36211355 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 61-360 |
| Cow position: | chr10:32983757-32983436 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 78, 142 |
| Conread position: | 62-362 |
| Cow position: | chr10:21388526-21388211 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 96, 43 |
| Conread position: | 62-362 |
| Cow position: | chr10:60611324-60611022 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 64-197 |
| Cow position: | chr10:30047825-30047961 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 124 |
| Conread position: | 80-362 |
| Cow position: | chr10:32421493-32421193 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 206 |
| Conread position: | 96-378 |
| Cow position: | chr10:40718260-40717987 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 196-425 |
| Cow position: | chr10:6650604-6650387 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 134, 48 |
| Conread position: | 196-483 |
| Cow position: | chr10:26932219-26932517 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 182 |
| Conread position: | 196-510 |
| Cow position: | chr10:17077074-17076764 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 196-510 |
| Cow position: | chr10:68351648-68351965 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 33 |
| Conread position: | 197-513 |
| Cow position: | chr10:31820637-31820935 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 198-511 |
| Cow position: | chr10:8690254-8689943 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 248 |
| Conread position: | 199-369 |
| Cow position: | chr10:17441419-17441579 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 199-383 |
| Cow position: | chr10:28021694-28021877 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 199-510 |
| Cow position: | chr10:8231181-8231495 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 220 |
| Conread position: | 199-513 |
| Cow position: | chr10:32324322-32324012 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 280-440 |
| Cow position: | chr10:15515577-15515418 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 26 |
| Conread position: | 297-513 |
| Cow position: | chr10:7745843-7745627 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 170, 141 |
| Conread position: | 298-512 |
| Cow position: | chr10:10264494-10264710 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 299-488 |
| Cow position: | chr10:67881890-67881707 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 299-503 |
| Cow position: | chr10:9885958-9886156 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 299-506 |
| Cow position: | chr10:58741038-58740829 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-512 |
| Cow position: | chr10:24984602-24984392 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 299-513 |
| Cow position: | chr10:11417704-11417492 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 299-513 |
| Cow position: | chr10:18162825-18162615 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 173, 58 |
| Conread position: | 311-479 |
| Cow position: | chr10:7726202-7726034 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 95 |
| Conread position: | 311-510 |
| Cow position: | chr10:27183600-27183799 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 311-510 |
| Cow position: | chr10:67866411-67866619 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 93, 97 |
| Conread position: | 311-512 |
| Cow position: | chr10:12738137-12738332 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 93, 10 |
| Conread position: | 311-513 |
| Cow position: | chr10:44294039-44294242 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 311-518 |
| Cow position: | chr10:16721839-16721634 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 93, 97 |
| Conread position: | 313-503 |
| Cow position: | chr10:48640324-48640517 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 88, 95 |
| Conread position: | 313-512 |
| Cow position: | chr10:49707560-49707349 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 95 |
| Conread position: | 314-513 |
| Cow position: | chr10:27736582-27736781 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 94 |
| Conread position: | 315-510 |
| Cow position: | chr10:19593755-19593559 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 158, 46 |
| Conread position: | 335-513 |
| Cow position: | chr10:64581957-64581773 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 365-511 |
| Cow position: | chr10:17443226-17443375 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 106, 77 |
Show alignments to all cow chromosomes.