Cow genome map

Conread name: Liv1-LVRM10114E02

Conread position: 14-306
Cow position: chr13:28115094-28114808 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 133, 20

Conread position: 16-362
Cow position: chr13:22946264-22946606 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 7

Conread position: 18-362
Cow position: chr13:30330255-30329915 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 50

Conread position: 28-151
Cow position: chr13:17968914-17968791 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 100

Conread position: 29-310
Cow position: chr13:35022421-35022703 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 128, 23

Conread position: 29-361
Cow position: chr13:33321465-33321803 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 209

Conread position: 29-362
Cow position: chr13:45304690-45305023 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 158

Conread position: 64-362
Cow position: chr13:52288357-52288643 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 119

Conread position: 71-215
Cow position: chr13:15535042-15534895 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 93

Conread position: 97-364
Cow position: chr13:389879-390144 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 55, 23

Conread position: 117-513
Cow position: chr13:53161317-53161695 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 79

Conread position: 160-299
Cow position: chr13:51924643-51924785 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 33

Conread position: 179-310
Cow position: chr13:47664436-47664306 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 10

Conread position: 196-516
Cow position: chr13:52282182-52282497 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 149

Conread position: 199-510
Cow position: chr13:16045690-16045993 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 204

Conread position: 199-510
Cow position: chr13:19546290-19546603 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 121

Conread position: 199-513
Cow position: chr13:61030874-61031189 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 213

Conread position: 199-516
Cow position: chr13:16571028-16570712 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 126

Conread position: 201-441
Cow position: chr13:8617278-8617025 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 32, 116

Conread position: 201-510
Cow position: chr13:41843330-41843013 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 181

Conread position: 202-510
Cow position: chr13:19534634-19534312 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 137

Conread position: 205-395
Cow position: chr13:43360403-43360592 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 105

Conread position: 217-528
Cow position: chr13:31494944-31494628 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 244-362
Cow position: chr13:19282019-19282138 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 249-421
Cow position: chr13:48604533-48604703 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 43

Conread position: 282-513
Cow position: chr13:54779072-54779305 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 9, 41

Conread position: 293-508
Cow position: chr13:43703385-43703169 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 110, 115

Conread position: 295-513
Cow position: chr13:49536857-49537073 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 176, 109

Conread position: 299-497
Cow position: chr13:20704733-20704537 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 174, 99

Conread position: 299-509
Cow position: chr13:13760395-13760608 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 27

Conread position: 299-510
Cow position: chr13:1234382-1234596 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 172, 138

Conread position: 299-513
Cow position: chr13:822698-822912 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 107

Conread position: 299-513
Cow position: chr13:10798711-10798499 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 90

Conread position: 299-513
Cow position: chr13:15702630-15702844 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 104, 109

Conread position: 299-513
Cow position: chr13:27108803-27108586 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 112, 27

Conread position: 299-513
Cow position: chr13:42125417-42125629 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 27

Conread position: 311-510
Cow position: chr13:2335906-2336102 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 15

Conread position: 311-513
Cow position: chr13:1421540-1421734 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 311-513
Cow position: chr13:6309265-6309070 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 162, 15

Conread position: 311-513
Cow position: chr13:12765951-12766151 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 96

Conread position: 311-513
Cow position: chr13:17170237-17170038 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 92, 97

Conread position: 311-513
Cow position: chr13:22070975-22071180 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 93, 64

Conread position: 311-513
Cow position: chr13:25812922-25812735 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 311-513
Cow position: chr13:54325868-54326074 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 98

Conread position: 311-513
Cow position: chr13:61822757-61822559 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 168, 15

Conread position: 312-509
Cow position: chr13:18318198-18317999 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 35

Conread position: 312-513
Cow position: chr13:17882062-17882258 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 42

Conread position: 327-499
Cow position: chr13:52442195-52442374 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 85

Conread position: 367-523
Cow position: chr13:26487890-26487733 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 39

Conread position: 384-513
Cow position: chr13:43360864-43360989 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 116
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 24

Show alignments to all cow chromosomes.