Cow genome map

Conread name: Liv1-LVRM10114E02

Conread position: 14-306
Cow position: chr16:10765393-10765692 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 216

Conread position: 14-306
Cow position: chr16:13469734-13470031 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 216

Conread position: 14-513
Cow position: chr16:6160016-6160516 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 35

Conread position: 14-513
Cow position: chr16:15126325-15125824 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 128

Conread position: 14-525
Cow position: chr16:33595296-33594778 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 400

Conread position: 14-583
Cow position: chr16:33426925-33426360 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 214

Conread position: 15-138
Cow position: chr16:54632683-54632561 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 15-166
Cow position: chr16:33148169-33148016 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 15-513
Cow position: chr16:32885028-32884530 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 26-155
Cow position: chr16:32029843-32029714 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 28-138
Cow position: chr16:54635523-54635413 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 28-372
Cow position: chr16:34131077-34131420 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 65

Conread position: 29-342
Cow position: chr16:43162307-43162618 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 118, 143

Conread position: 57-360
Cow position: chr16:10251203-10250911 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 31, 227

Conread position: 58-362
Cow position: chr16:27974298-27974612 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 59-252
Cow position: chr16:49726831-49726638 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 134

Conread position: 59-360
Cow position: chr16:23495353-23495682 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 160

Conread position: 59-362
Cow position: chr16:26065981-26065668 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 64-362
Cow position: chr16:10444698-10444396 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 133

Conread position: 66-361
Cow position: chr16:7770717-7770399 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 62

Conread position: 72-246
Cow position: chr16:28756431-28756249 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 80-306
Cow position: chr16:34173722-34173489 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 150

Conread position: 84-320
Cow position: chr16:22252942-22252698 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 63, 197

Conread position: 112-372
Cow position: chr16:19937718-19937447 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 35, 87

Conread position: 133-362
Cow position: chr16:8786462-8786704 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 193-510
Cow position: chr16:45572998-45572668 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 196-511
Cow position: chr16:30800333-30800002 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 197-411
Cow position: chr16:5249597-5249382 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 20, 71

Conread position: 197-510
Cow position: chr16:15878806-15879106 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 132

Conread position: 198-496
Cow position: chr16:33129219-33129505 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 35

Conread position: 198-510
Cow position: chr16:49898421-49898736 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 174

Conread position: 199-363
Cow position: chr16:32029639-32029463 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 76

Conread position: 199-516
Cow position: chr16:24571167-24571503 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 207-425
Cow position: chr16:30712438-30712666 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 138

Conread position: 211-510
Cow position: chr16:9252463-9252774 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 219-340
Cow position: chr16:32173517-32173397 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 100

Conread position: 232-510
Cow position: chr16:54011609-54011338 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 171

Conread position: 243-510
Cow position: chr16:9574876-9575151 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 204

Conread position: 243-511
Cow position: chr16:19640204-19639930 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 122

Conread position: 255-510
Cow position: chr16:43501789-43502049 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 11

Conread position: 255-510
Cow position: chr16:52928379-52928631 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 299-499
Cow position: chr16:39220205-39220007 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 143, 0

Conread position: 299-513
Cow position: chr16:16436000-16436213 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 105, 33

Conread position: 299-513
Cow position: chr16:26791249-26791025 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 116

Conread position: 299-515
Cow position: chr16:564908-564685 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 169, 145

Conread position: 299-515
Cow position: chr16:42046898-42046679 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 143

Conread position: 299-518
Cow position: chr16:6083790-6084013 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 104, 109

Conread position: 299-526
Cow position: chr16:33986199-33986427 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 172, 143

Conread position: 300-513
Cow position: chr16:12525698-12525910 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 26

Conread position: 300-516
Cow position: chr16:11810897-11810678 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 33

Conread position: 303-511
Cow position: chr16:56872136-56872346 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 101, 23

Conread position: 311-513
Cow position: chr16:3593198-3592998 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 12

Conread position: 311-513
Cow position: chr16:16429865-16430067 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 98

Conread position: 311-513
Cow position: chr16:43165010-43164806 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 97

Conread position: 311-518
Cow position: chr16:6087380-6087591 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 90, 97

Conread position: 312-510
Cow position: chr16:35035803-35035601 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 133

Conread position: 312-513
Cow position: chr16:20497187-20497391 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 14

Conread position: 313-511
Cow position: chr16:9569813-9569619 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 19

Conread position: 313-513
Cow position: chr16:3929939-3929740 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 13

Conread position: 325-513
Cow position: chr16:41581531-41581345 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 83

Conread position: 327-513
Cow position: chr16:25612056-25611871 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 149, 110

Conread position: 334-516
Cow position: chr16:5429460-5429646 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 30

Conread position: 336-521
Cow position: chr16:30680661-30680849 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 144, 101

Conread position: 337-513
Cow position: chr16:17597888-17597717 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 71

Conread position: 342-513
Cow position: chr16:32034470-32034639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 8

Conread position: 394-511
Cow position: chr16:5249178-5249058 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 14

Conread position: 406-512
Cow position: chr16:298660-298551 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 38

Show alignments to all cow chromosomes.