Cow genome map


           Conread name:
           Liv1-LVRM10114E02
        

               Conread position:
               14-306
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               80, 216
               

               Conread position:
               14-306
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 216
               

               Conread position:
               14-513
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 35
               

               Conread position:
               14-513
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               14-525
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 400
               

               Conread position:
               14-583
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 214
               

               Conread position:
               15-138
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               15-166
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               15-513
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               26-155
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-138
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-372
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               123, 65
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               118, 143
               

               Conread position:
               57-360
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               31, 227
               

               Conread position:
               58-362
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 55
               

               Conread position:
               59-252
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 134
               

               Conread position:
               59-360
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 160
               

               Conread position:
               59-362
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               64-362
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 133
               

               Conread position:
               66-361
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 62
               

               Conread position:
               72-246
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               80-306
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               84-320
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               63, 197
               

               Conread position:
               112-372
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               133-362
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               193-510
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               196-511
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               197-411
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               197-510
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               198-496
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 35
               

               Conread position:
               198-510
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 174
               

               Conread position:
               199-363
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 76
               

               Conread position:
               199-516
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 144
               

               Conread position:
               207-425
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 138
               

               Conread position:
               211-510
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               219-340
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               232-510
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 171
               

               Conread position:
               243-510
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 204
               

               Conread position:
               243-511
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               87, 122
               

               Conread position:
               255-510
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               255-510
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               299-499
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               299-515
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               169, 145
               

               Conread position:
               299-515
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               171, 143
               

               Conread position:
               299-518
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               104, 109
               

               Conread position:
               299-526
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               172, 143
               

               Conread position:
               300-513
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               300-516
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               303-511
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               311-513
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               101, 12
               

               Conread position:
               311-513
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               45, 98
               

               Conread position:
               311-513
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 97
               

               Conread position:
               311-518
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               90, 97
               

               Conread position:
               312-510
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               91, 133
               

               Conread position:
               312-513
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               313-511
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               313-513
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               325-513
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 83
               

               Conread position:
               327-513
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               149, 110
               

               Conread position:
               334-516
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               336-521
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               144, 101
               

               Conread position:
               337-513
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 71
               

               Conread position:
               342-513
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               394-511
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               10, 14
               

               Conread position:
               406-512
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 38
               
Show alignments to all cow chromosomes.