Cow genome map

Conread name: Liv1-LVRM10114E02

Conread position: 10-362
Cow position: chr17:11244101-11244474 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 6

Conread position: 14-362
Cow position: chr17:11051633-11051993 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 15, 62

Conread position: 14-395
Cow position: chr17:17449554-17449160 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 39

Conread position: 14-506
Cow position: chr17:25557305-25556820 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 14-516
Cow position: chr17:23564642-23565149 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 255

Conread position: 15-360
Cow position: chr17:1729877-1730226 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 8

Conread position: 15-372
Cow position: chr17:2135172-2134807 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 40

Conread position: 16-279
Cow position: chr17:1952636-1952905 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 166

Conread position: 20-360
Cow position: chr17:1490907-1491252 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 300

Conread position: 21-222
Cow position: chr17:6208449-6208239 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 180

Conread position: 26-362
Cow position: chr17:27760831-27761180 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 259

Conread position: 29-360
Cow position: chr17:22823328-22822994 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 157

Conread position: 41-360
Cow position: chr17:43730105-43730427 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 95

Conread position: 51-362
Cow position: chr17:5348595-5348262 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 210

Conread position: 51-368
Cow position: chr17:21460650-21460980 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 227

Conread position: 52-368
Cow position: chr17:17642215-17641879 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 57-231
Cow position: chr17:2239582-2239763 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 173

Conread position: 59-248
Cow position: chr17:16385773-16385577 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 59-362
Cow position: chr17:10636738-10636419 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 87, 144

Conread position: 59-362
Cow position: chr17:25546567-25546250 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 56

Conread position: 59-362
Cow position: chr17:41950063-41950354 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 96, 102

Conread position: 64-360
Cow position: chr17:1757252-1756950 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 76

Conread position: 64-362
Cow position: chr17:11124962-11124662 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 73-291
Cow position: chr17:43261799-43261574 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 201

Conread position: 74-348
Cow position: chr17:29040046-29040330 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 124

Conread position: 77-380
Cow position: chr17:42337432-42337745 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 295

Conread position: 85-349
Cow position: chr17:892205-891943 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 118-360
Cow position: chr17:6762854-6763107 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 193-362
Cow position: chr17:31562537-31562359 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 28

Conread position: 197-510
Cow position: chr17:13381716-13382045 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 24

Conread position: 199-392
Cow position: chr17:21613534-21613730 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 135

Conread position: 199-396
Cow position: chr17:22581639-22581837 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 124

Conread position: 199-510
Cow position: chr17:38875039-38874722 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 248

Conread position: 199-523
Cow position: chr17:12739994-12739672 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 32

Conread position: 202-518
Cow position: chr17:22043032-22043343 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 140

Conread position: 212-396
Cow position: chr17:33548008-33548192 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 123

Conread position: 218-362
Cow position: chr17:6207403-6207260 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 59

Conread position: 233-516
Cow position: chr17:21605438-21605174 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 5

Conread position: 255-510
Cow position: chr17:22511459-22511710 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 146

Conread position: 267-509
Cow position: chr17:6841435-6841198 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 62

Conread position: 274-515
Cow position: chr17:26222555-26222316 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 197, 22

Conread position: 296-513
Cow position: chr17:21423920-21423706 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 38

Conread position: 299-510
Cow position: chr17:11828786-11829003 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 109

Conread position: 299-513
Cow position: chr17:3764462-3764251 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 172, 33

Conread position: 299-513
Cow position: chr17:11189220-11189437 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 113, 104

Conread position: 299-513
Cow position: chr17:19975568-19975357 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 105, 22

Conread position: 299-513
Cow position: chr17:25190615-25190403 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 25

Conread position: 299-513
Cow position: chr17:28083985-28083777 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 35

Conread position: 299-513
Cow position: chr17:36145697-36145900 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 299-516
Cow position: chr17:44533155-44532940 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 105, 33

Conread position: 303-513
Cow position: chr17:12553108-12553313 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 23

Conread position: 311-513
Cow position: chr17:21480073-21479867 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 93, 101

Conread position: 335-513
Cow position: chr17:6881096-6880915 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 73

Conread position: 367-509
Cow position: chr17:9047818-9047674 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 70

Conread position: 391-513
Cow position: chr17:17449004-17448879 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 14

Show alignments to all cow chromosomes.