Cow genome map
Conread name: | Liv1-LVRM10114E02 |
Conread position: | 10-362 |
Cow position: | chr17:11244101-11244474 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 6 |
Conread position: | 14-362 |
Cow position: | chr17:11051633-11051993 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 263 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 15, 62 |
Conread position: | 14-395 |
Cow position: | chr17:17449554-17449160 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 39 |
Conread position: | 14-506 |
Cow position: | chr17:25557305-25556820 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 42 |
Conread position: | 14-516 |
Cow position: | chr17:23564642-23565149 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 255 |
Conread position: | 15-360 |
Cow position: | chr17:1729877-1730226 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 8 |
Conread position: | 15-372 |
Cow position: | chr17:2135172-2134807 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 267 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 13, 40 |
Conread position: | 16-279 |
Cow position: | chr17:1952636-1952905 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 166 |
Conread position: | 20-360 |
Cow position: | chr17:1490907-1491252 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 300 |
Conread position: | 21-222 |
Cow position: | chr17:6208449-6208239 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 160 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 60, 180 |
Conread position: | 26-362 |
Cow position: | chr17:27760831-27761180 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 259 |
Conread position: | 29-360 |
Cow position: | chr17:22823328-22822994 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 157 |
Conread position: | 41-360 |
Cow position: | chr17:43730105-43730427 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 95 |
Conread position: | 51-362 |
Cow position: | chr17:5348595-5348262 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 210 |
Conread position: | 51-368 |
Cow position: | chr17:21460650-21460980 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 227 |
Conread position: | 52-368 |
Cow position: | chr17:17642215-17641879 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 61 |
Conread position: | 57-231 |
Cow position: | chr17:2239582-2239763 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 143 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 37, 173 |
Conread position: | 59-248 |
Cow position: | chr17:16385773-16385577 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 59-362 |
Cow position: | chr17:10636738-10636419 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 233 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 87, 144 |
Conread position: | 59-362 |
Cow position: | chr17:25546567-25546250 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 56 |
Conread position: | 59-362 |
Cow position: | chr17:41950063-41950354 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 221 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 96, 102 |
Conread position: | 64-360 |
Cow position: | chr17:1757252-1756950 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 76 |
Conread position: | 64-362 |
Cow position: | chr17:11124962-11124662 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 19 |
Conread position: | 73-291 |
Cow position: | chr17:43261799-43261574 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 171 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 74, 201 |
Conread position: | 74-348 |
Cow position: | chr17:29040046-29040330 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 124 |
Conread position: | 77-380 |
Cow position: | chr17:42337432-42337745 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 295 |
Conread position: | 85-349 |
Cow position: | chr17:892205-891943 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 64 |
Conread position: | 118-360 |
Cow position: | chr17:6762854-6763107 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 193-362 |
Cow position: | chr17:31562537-31562359 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 136 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 40, 28 |
Conread position: | 197-510 |
Cow position: | chr17:13381716-13382045 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 36, 24 |
Conread position: | 199-392 |
Cow position: | chr17:21613534-21613730 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 155 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 34, 135 |
Conread position: | 199-396 |
Cow position: | chr17:22581639-22581837 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 154 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 34, 124 |
Conread position: | 199-510 |
Cow position: | chr17:38875039-38874722 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 248 |
Conread position: | 199-523 |
Cow position: | chr17:12739994-12739672 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 32 |
Conread position: | 202-518 |
Cow position: | chr17:22043032-22043343 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 140 |
Conread position: | 212-396 |
Cow position: | chr17:33548008-33548192 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 148 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 21, 123 |
Conread position: | 218-362 |
Cow position: | chr17:6207403-6207260 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 14, 59 |
Conread position: | 233-516 |
Cow position: | chr17:21605438-21605174 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 206 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 13, 5 |
Conread position: | 255-510 |
Cow position: | chr17:22511459-22511710 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 146 |
Conread position: | 267-509 |
Cow position: | chr17:6841435-6841198 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 182 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 27, 62 |
Conread position: | 274-515 |
Cow position: | chr17:26222555-26222316 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 182 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 197, 22 |
Conread position: | 296-513 |
Cow position: | chr17:21423920-21423706 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 163 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 108, 38 |
Conread position: | 299-510 |
Cow position: | chr17:11828786-11829003 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 102, 109 |
Conread position: | 299-513 |
Cow position: | chr17:3764462-3764251 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 172, 33 |
Conread position: | 299-513 |
Cow position: | chr17:11189220-11189437 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 161 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 113, 104 |
Conread position: | 299-513 |
Cow position: | chr17:19975568-19975357 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 167 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 105, 22 |
Conread position: | 299-513 |
Cow position: | chr17:25190615-25190403 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 168 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 33, 25 |
Conread position: | 299-513 |
Cow position: | chr17:28083985-28083777 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 158 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 104, 35 |
Conread position: | 299-513 |
Cow position: | chr17:36145697-36145900 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 299-516 |
Cow position: | chr17:44533155-44532940 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 171 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 105, 33 |
Conread position: | 303-513 |
Cow position: | chr17:12553108-12553313 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 100, 23 |
Conread position: | 311-513 |
Cow position: | chr17:21480073-21479867 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 163 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 93, 101 |
Conread position: | 335-513 |
Cow position: | chr17:6881096-6880915 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 144 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 69, 73 |
Conread position: | 367-509 |
Cow position: | chr17:9047818-9047674 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 104, 70 |
Conread position: | 391-513 |
Cow position: | chr17:17449004-17448879 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 109 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 21, 14 |
Show alignments to all cow chromosomes.