Cow genome map

Conread name: Liv1-LVRM10114E02

Conread position: 2-513
Cow position: chr18:11234907-11234407 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 65

Conread position: 14-291
Cow position: chr18:41219110-41218835 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 50

Conread position: 14-306
Cow position: chr18:39631143-39630844 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 216

Conread position: 14-432
Cow position: chr18:35508043-35508456 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 68

Conread position: 16-362
Cow position: chr18:21548889-21549247 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 7

Conread position: 19-151
Cow position: chr18:2999021-2999153 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 32

Conread position: 20-196
Cow position: chr18:41912094-41912279 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 127, 181

Conread position: 29-363
Cow position: chr18:5226545-5226875 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 118, 158

Conread position: 49-306
Cow position: chr18:48857789-48858051 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 17, 77

Conread position: 52-319
Cow position: chr18:14730370-14730090 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 116

Conread position: 57-370
Cow position: chr18:50302825-50302507 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 33

Conread position: 59-249
Cow position: chr18:15804968-15805171 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 70

Conread position: 68-348
Cow position: chr18:51785889-51786171 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 52

Conread position: 76-348
Cow position: chr18:51821995-51822273 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 44

Conread position: 81-303
Cow position: chr18:38905069-38904837 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 201

Conread position: 92-306
Cow position: chr18:14730798-14731016 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 107

Conread position: 120-362
Cow position: chr18:44505075-44505334 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 79

Conread position: 137-362
Cow position: chr18:4940680-4940456 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 119

Conread position: 184-285
Cow position: chr18:8110913-8111015 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 186-423
Cow position: chr18:38329852-38329617 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 199-483
Cow position: chr18:23431025-23431298 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 69

Conread position: 199-492
Cow position: chr18:2783124-2783441 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 122

Conread position: 200-310
Cow position: chr18:5770876-5770764 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 201-420
Cow position: chr18:49899117-49899333 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 201-510
Cow position: chr18:46864139-46864444 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 139

Conread position: 201-511
Cow position: chr18:1387513-1387207 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 154

Conread position: 204-402
Cow position: chr18:43820760-43820548 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 172

Conread position: 231-534
Cow position: chr18:42288575-42288886 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 135

Conread position: 240-510
Cow position: chr18:4503759-4504032 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 126

Conread position: 257-492
Cow position: chr18:10050974-10051211 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 280-513
Cow position: chr18:47274906-47275135 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 192, 15

Conread position: 292-400
Cow position: chr18:8111058-8111166 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 299-510
Cow position: chr18:49048305-49048522 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 112

Conread position: 299-511
Cow position: chr18:37738214-37738423 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 27

Conread position: 299-513
Cow position: chr18:311054-311255 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 299-513
Cow position: chr18:39547632-39547421 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 174, 22

Conread position: 299-513
Cow position: chr18:45109652-45109863 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 104, 27

Conread position: 299-513
Cow position: chr18:45118713-45118928 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 175, 27

Conread position: 299-528
Cow position: chr18:48219265-48219042 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 105, 109

Conread position: 311-512
Cow position: chr18:22652391-22652599 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 161, 131

Conread position: 311-513
Cow position: chr18:32048024-32048231 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 99

Conread position: 311-513
Cow position: chr18:56036856-56037062 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 98

Conread position: 360-518
Cow position: chr18:39080779-39080622 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 48

Show alignments to all cow chromosomes.