Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 14-291 |
| Cow position: | chr19:30915187-30915471 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 239 |
| Conread position: | 14-305 |
| Cow position: | chr19:35739918-35739624 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 20-339 |
| Cow position: | chr19:25960247-25959942 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 130, 81 |
| Conread position: | 28-179 |
| Cow position: | chr19:10552612-10552453 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 29-361 |
| Cow position: | chr19:7671195-7671531 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 29-362 |
| Cow position: | chr19:2679466-2679127 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 253 |
| Conread position: | 29-368 |
| Cow position: | chr19:49165416-49165065 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 154, 132 |
| Conread position: | 30-361 |
| Cow position: | chr19:2815492-2815844 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 121, 228 |
| Conread position: | 30-361 |
| Cow position: | chr19:52752939-52753298 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 170 |
| Conread position: | 46-289 |
| Cow position: | chr19:7879787-7879547 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 59-362 |
| Cow position: | chr19:33743478-33743781 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 256 |
| Conread position: | 69-362 |
| Cow position: | chr19:11101308-11100997 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 72-343 |
| Cow position: | chr19:40293983-40294272 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 77-301 |
| Cow position: | chr19:4924819-4924594 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 188-403 |
| Cow position: | chr19:8450825-8451052 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 193-400 |
| Cow position: | chr19:14544166-14543958 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 143 |
| Conread position: | 194-498 |
| Cow position: | chr19:24244053-24243761 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 225, 65 |
| Conread position: | 196-491 |
| Cow position: | chr19:21747415-21747102 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 197-510 |
| Cow position: | chr19:33517448-33517768 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 36, 176 |
| Conread position: | 199-361 |
| Cow position: | chr19:48049808-48049643 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 199-402 |
| Cow position: | chr19:2772107-2771914 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 199-410 |
| Cow position: | chr19:8282831-8283043 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 199-424 |
| Cow position: | chr19:26678531-26678297 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 175 |
| Conread position: | 199-510 |
| Cow position: | chr19:22688597-22688913 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 200-567 |
| Cow position: | chr19:44738648-44739012 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 201-498 |
| Cow position: | chr19:18937557-18937858 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 215-393 |
| Cow position: | chr19:33735074-33734894 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 238-427 |
| Cow position: | chr19:24089351-24089163 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 248-362 |
| Cow position: | chr19:33136376-33136261 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 256-510 |
| Cow position: | chr19:26950684-26950943 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 282-510 |
| Cow position: | chr19:23039785-23039552 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 299-510 |
| Cow position: | chr19:45578495-45578282 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 102, 88 |
| Conread position: | 299-511 |
| Cow position: | chr19:25992085-25992301 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 299-511 |
| Cow position: | chr19:36464783-36464576 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-513 |
| Cow position: | chr19:39626358-39626572 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 299-513 |
| Cow position: | chr19:51619216-51619431 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 299-513 |
| Cow position: | chr19:54835885-54835669 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 299-519 |
| Cow position: | chr19:49863838-49863633 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 310-516 |
| Cow position: | chr19:9881446-9881651 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 93, 54 |
| Conread position: | 311-513 |
| Cow position: | chr19:7582492-7582695 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 311-513 |
| Cow position: | chr19:20712738-20712531 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 312-509 |
| Cow position: | chr19:52730928-52731126 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 312-522 |
| Cow position: | chr19:45999715-45999517 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 22 |
| Conread position: | 334-516 |
| Cow position: | chr19:9535770-9535958 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 338-513 |
| Cow position: | chr19:6555680-6555857 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 136, 112 |
| Conread position: | 342-498 |
| Cow position: | chr19:18655855-18656014 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 350-499 |
| Cow position: | chr19:19012993-19012842 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 122, 92 |
| Conread position: | 355-509 |
| Cow position: | chr19:398090-397934 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 87 |
| Conread position: | 362-513 |
| Cow position: | chr19:47777875-47777723 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 394-513 |
| Cow position: | chr19:11609677-11609795 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 14 |
Show alignments to all cow chromosomes.