Cow genome map


           Conread name:
           Liv1-LVRM10114E02
        

               Conread position:
               4-306
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               14-306
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               15-179
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               20-179
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 69
               

               Conread position:
               20-304
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               74, 209
               

               Conread position:
               21-362
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 206
               

               Conread position:
               28-180
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               120, 153
               

               Conread position:
               28-291
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               29-362
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 46
               

               Conread position:
               29-362
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 172
               

               Conread position:
               30-189
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               44-306
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 193
               

               Conread position:
               51-350
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               51-365
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               182, 16
               

               Conread position:
               52-149
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-291
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               59-360
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               59-362
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 146
               

               Conread position:
               59-380
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               63-233
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 158
               

               Conread position:
               63-362
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               77-320
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               81-363
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 116
               

               Conread position:
               88-513
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 98
               

               Conread position:
               183-350
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 144
               

               Conread position:
               193-373
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               40, 173
               

               Conread position:
               195-361
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               196-402
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               36, 172
               

               Conread position:
               196-502
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 184
               

               Conread position:
               198-510
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               199-373
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               199-395
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               199-472
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 147
               

               Conread position:
               199-474
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               199-510
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               199-510
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               199-511
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               199-516
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               199-516
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 211
               

               Conread position:
               200-510
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 201
               

               Conread position:
               201-467
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 239
               

               Conread position:
               201-516
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               202-498
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 242
               

               Conread position:
               212-516
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               235-511
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               245-362
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               255-424
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 107
               

               Conread position:
               263-509
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               297-513
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               299-510
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               299-511
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               299-511
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               175, 24
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               161, 27
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               299-513
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               144, 27
               

               Conread position:
               299-516
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               176, 108
               

               Conread position:
               299-518
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               301-524
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               104, 143
               

               Conread position:
               303-522
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               310-523
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               93, 98
               

               Conread position:
               311-513
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               311-513
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               93, 31
               

               Conread position:
               311-516
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 84
               

               Conread position:
               316-510
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 126
               

               Conread position:
               319-511
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               320-516
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               330-510
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 81
               

               Conread position:
               336-513
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               138, 71
               

               Conread position:
               336-513
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               138, 106
               

               Conread position:
               336-513
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 72
               

               Conread position:
               360-516
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               361-513
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               380-518
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 28
               
Show alignments to all cow chromosomes.