Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 10-149 |
| Cow position: | chr20:3877362-3877503 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 14-306 |
| Cow position: | chr20:23198072-23198371 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 80, 238 |
| Conread position: | 14-509 |
| Cow position: | chr20:35704551-35705051 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 212 |
| Conread position: | 15-178 |
| Cow position: | chr20:32911527-32911362 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 26-362 |
| Cow position: | chr20:27997052-27997425 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 120, 272 |
| Conread position: | 28-161 |
| Cow position: | chr20:23760560-23760694 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 28-196 |
| Cow position: | chr20:13755099-13754921 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 174 |
| Conread position: | 29-271 |
| Cow position: | chr20:35722777-35723024 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 117, 173 |
| Conread position: | 52-328 |
| Cow position: | chr20:40093428-40093146 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 57-362 |
| Cow position: | chr20:19620559-19620857 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 9, 149 |
| Conread position: | 65-362 |
| Cow position: | chr20:34106213-34105911 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 257 |
| Conread position: | 191-511 |
| Cow position: | chr20:19466508-19466810 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 193-332 |
| Cow position: | chr20:30749303-30749162 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 198-422 |
| Cow position: | chr20:37345787-37345561 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 212 |
| Conread position: | 199-395 |
| Cow position: | chr20:22402029-22402226 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 199-430 |
| Cow position: | chr20:39441205-39440980 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 199-498 |
| Cow position: | chr20:17306479-17306787 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 199-510 |
| Cow position: | chr20:34958563-34958874 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 299-492 |
| Cow position: | chr20:41972165-41972356 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 112, 7 |
| Conread position: | 299-505 |
| Cow position: | chr20:29588406-29588202 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-510 |
| Cow position: | chr20:31189528-31189326 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 299-511 |
| Cow position: | chr20:17918906-17918693 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 299-513 |
| Cow position: | chr20:26398736-26398945 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 179, 27 |
| Conread position: | 299-513 |
| Cow position: | chr20:33895168-33895380 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 299-513 |
| Cow position: | chr20:35609926-35610139 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 299-513 |
| Cow position: | chr20:40157502-40157292 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-572 |
| Cow position: | chr20:33201908-33202192 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 308-511 |
| Cow position: | chr20:12546194-12546387 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 95, 100 |
| Conread position: | 311-513 |
| Cow position: | chr20:22034806-22035008 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 311-516 |
| Cow position: | chr20:40225375-40225166 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 93, 76 |
| Conread position: | 317-522 |
| Cow position: | chr20:5897128-5896920 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 91 |
| Conread position: | 332-513 |
| Cow position: | chr20:41689341-41689158 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 342-455 |
| Cow position: | chr20:34296328-34296440 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 353-513 |
| Cow position: | chr20:6905735-6905573 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 123, 89 |
Show alignments to all cow chromosomes.