Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 15-179 |
| Cow position: | chr24:16886347-16886174 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 15-306 |
| Cow position: | chr24:9685245-9684948 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 29-290 |
| Cow position: | chr24:9865676-9865405 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 29-362 |
| Cow position: | chr24:21128755-21129092 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 117, 173 |
| Conread position: | 29-362 |
| Cow position: | chr24:27743644-27743298 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 51-362 |
| Cow position: | chr24:18048918-18049229 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 59-361 |
| Cow position: | chr24:39510625-39510949 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 60-362 |
| Cow position: | chr24:2454921-2454622 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 139, 27 |
| Conread position: | 64-360 |
| Cow position: | chr24:28829828-28829522 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 66-362 |
| Cow position: | chr24:10568791-10568501 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 184 |
| Conread position: | 72-316 |
| Cow position: | chr24:25880577-25880826 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 127 |
| Conread position: | 130-395 |
| Cow position: | chr24:36745875-36746136 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 135 |
| Conread position: | 161-306 |
| Cow position: | chr24:24158954-24159101 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 193-511 |
| Cow position: | chr24:39036599-39036911 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 49 |
| Conread position: | 196-510 |
| Cow position: | chr24:29153627-29153942 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 199-510 |
| Cow position: | chr24:29502832-29502518 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 199-516 |
| Cow position: | chr24:3002535-3002852 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 218-576 |
| Cow position: | chr24:14537597-14537232 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 233-441 |
| Cow position: | chr24:36899190-36899392 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 263-516 |
| Cow position: | chr24:20776479-20776233 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 128 |
| Conread position: | 276-513 |
| Cow position: | chr24:24159198-24159439 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 282-513 |
| Cow position: | chr24:7875157-7874932 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 299-497 |
| Cow position: | chr24:5561288-5561488 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 299-510 |
| Cow position: | chr24:6544701-6544487 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 299-513 |
| Cow position: | chr24:42657995-42657781 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 175, 144 |
| Conread position: | 300-513 |
| Cow position: | chr24:10435112-10434912 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 183, 64 |
| Conread position: | 308-518 |
| Cow position: | chr24:28989743-28989951 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 310-513 |
| Cow position: | chr24:5519800-5520000 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 102, 96 |
| Conread position: | 310-513 |
| Cow position: | chr24:40465537-40465332 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 311-508 |
| Cow position: | chr24:16893453-16893257 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 311-513 |
| Cow position: | chr24:33906110-33905906 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 311-513 |
| Cow position: | chr24:39795486-39795285 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 311-516 |
| Cow position: | chr24:26698112-26697901 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 93, 97 |
| Conread position: | 311-554 |
| Cow position: | chr24:2114468-2114709 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 312-510 |
| Cow position: | chr24:5086907-5086714 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 312-513 |
| Cow position: | chr24:26731198-26730999 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 312-513 |
| Cow position: | chr24:28748696-28748894 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 313-510 |
| Cow position: | chr24:8611221-8611021 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 91, 95 |
| Conread position: | 313-510 |
| Cow position: | chr24:41442155-41441956 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 313-513 |
| Cow position: | chr24:28334906-28335106 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 314-513 |
| Cow position: | chr24:28541490-28541689 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 315-513 |
| Cow position: | chr24:4627462-4627266 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 156, 76 |
| Conread position: | 336-513 |
| Cow position: | chr24:4653836-4653657 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 137, 106 |
| Conread position: | 336-513 |
| Cow position: | chr24:39176247-39176068 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 140, 106 |
| Conread position: | 337-513 |
| Cow position: | chr24:42968309-42968488 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 71 |
| Conread position: | 386-516 |
| Cow position: | chr24:36746530-36746660 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 22 |
Show alignments to all cow chromosomes.