Cow genome map
| Conread name: | Liv1-LVRM10114E02 |
| Conread position: | 8-356 |
| Cow position: | chr25:7663710-7664034 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 10-362 |
| Cow position: | chr25:24605662-24605289 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 270 |
| Conread position: | 14-306 |
| Cow position: | chr25:5794425-5794718 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 14-306 |
| Cow position: | chr25:10763134-10763431 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 216 |
| Conread position: | 14-395 |
| Cow position: | chr25:22157359-22157740 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 25 |
| Conread position: | 14-513 |
| Cow position: | chr25:12254926-12254414 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 16-509 |
| Cow position: | chr25:7493804-7493322 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 17-372 |
| Cow position: | chr25:11259847-11260207 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 219 |
| Conread position: | 18-515 |
| Cow position: | chr25:11434100-11433591 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 300 |
| Conread position: | 29-222 |
| Cow position: | chr25:22816145-22816345 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 113, 170 |
| Conread position: | 29-328 |
| Cow position: | chr25:18010308-18010025 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 203, 116 |
| Conread position: | 29-362 |
| Cow position: | chr25:24577481-24577131 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 247 |
| Conread position: | 29-362 |
| Cow position: | chr25:31247386-31247038 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 172 |
| Conread position: | 29-368 |
| Cow position: | chr25:14556065-14556405 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 120 |
| Conread position: | 51-155 |
| Cow position: | chr25:21956648-21956544 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-306 |
| Cow position: | chr25:6760991-6761258 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 206 |
| Conread position: | 52-368 |
| Cow position: | chr25:8543689-8544004 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 175 |
| Conread position: | 59-179 |
| Cow position: | chr25:6279062-6278936 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 59-362 |
| Cow position: | chr25:36034898-36035198 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 62-222 |
| Cow position: | chr25:22808935-22809102 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 156 |
| Conread position: | 62-368 |
| Cow position: | chr25:22797875-22797579 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 63-352 |
| Cow position: | chr25:10291852-10292147 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 111 |
| Conread position: | 64-360 |
| Cow position: | chr25:15656228-15656531 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 64-361 |
| Cow position: | chr25:6130627-6130932 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 65-358 |
| Cow position: | chr25:15456521-15456218 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 72 |
| Conread position: | 67-329 |
| Cow position: | chr25:22585787-22585513 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 69, 133 |
| Conread position: | 112-362 |
| Cow position: | chr25:16806080-16805814 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 142-509 |
| Cow position: | chr25:36818646-36818284 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 154-359 |
| Cow position: | chr25:9363-9153 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 196-497 |
| Cow position: | chr25:40632275-40631990 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 196-509 |
| Cow position: | chr25:12409208-12408889 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 196-511 |
| Cow position: | chr25:12142641-12142324 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 197-432 |
| Cow position: | chr25:24444567-24444805 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 197-436 |
| Cow position: | chr25:9836009-9836249 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 199-425 |
| Cow position: | chr25:11408895-11409128 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 199-496 |
| Cow position: | chr25:10473820-10474120 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 199-510 |
| Cow position: | chr25:16117022-16117339 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 166 |
| Conread position: | 199-510 |
| Cow position: | chr25:36780002-36780298 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 202-500 |
| Cow position: | chr25:31060487-31060783 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 225-513 |
| Cow position: | chr25:7053028-7052736 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 293-513 |
| Cow position: | chr25:9523902-9523684 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 5, 106 |
| Conread position: | 296-513 |
| Cow position: | chr25:34386844-34387066 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 296-513 |
| Cow position: | chr25:34389912-34389690 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 299-497 |
| Cow position: | chr25:17003012-17003219 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 299-509 |
| Cow position: | chr25:2128356-2128148 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-511 |
| Cow position: | chr25:6757783-6757998 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 299-513 |
| Cow position: | chr25:5309557-5309342 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 172, 92 |
| Conread position: | 299-515 |
| Cow position: | chr25:14334482-14334691 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 300-494 |
| Cow position: | chr25:18563137-18562921 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 300-512 |
| Cow position: | chr25:7700505-7700296 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 310-513 |
| Cow position: | chr25:7050885-7050680 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 311-495 |
| Cow position: | chr25:6983572-6983385 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 102, 95 |
| Conread position: | 311-513 |
| Cow position: | chr25:7797207-7797408 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 311-513 |
| Cow position: | chr25:8086754-8086553 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 166, 23 |
| Conread position: | 311-518 |
| Cow position: | chr25:7768257-7768063 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 313-418 |
| Cow position: | chr25:33013423-33013319 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 313-510 |
| Cow position: | chr25:10937246-10937442 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 313-523 |
| Cow position: | chr25:9844219-9844422 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 91, 95 |
| Conread position: | 325-513 |
| Cow position: | chr25:4678071-4677881 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 326-509 |
| Cow position: | chr25:17630997-17631179 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 333-515 |
| Cow position: | chr25:6451923-6451736 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 342-513 |
| Cow position: | chr25:20395848-20396012 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 349-513 |
| Cow position: | chr25:23952162-23952329 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 62 |
Show alignments to all cow chromosomes.